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Volumn 7, Issue 1, 2017, Pages

Genetic targeting and anatomical registration of neuronal populations in the zebrafish brain with a new set of BAC transgenic tools

Author keywords

[No Author keywords available]

Indexed keywords

ZEBRAFISH PROTEIN;

EID: 85024109028     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/s41598-017-04657-x     Document Type: Article
Times cited : (49)

References (53)
  • 2
    • 84857690012 scopus 로고    scopus 로고
    • Genetically encoded neural activity indicators
    • Looger, L. L. & Griesbeck, O. Genetically encoded neural activity indicators. Curr. Opin. Neurobiol. 22, 18-23 (2012).
    • (2012) Curr. Opin. Neurobiol. , vol.22 , pp. 18-23
    • Looger, L.L.1    Griesbeck, O.2
  • 3
    • 0027160708 scopus 로고
    • Targeted gene expression as a means of altering cell fates and generating dominant phenotypes
    • Brand, A. H. & Perrimon, N. Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development 118, 401-415 (1993).
    • (1993) Development , vol.118 , pp. 401-415
    • Brand, A.H.1    Perrimon, N.2
  • 4
    • 0030460425 scopus 로고    scopus 로고
    • Subregion-and cell type-restricted gene knockout in mouse brain
    • Tsien, J. Z. et al. Subregion-and Cell Type-Restricted Gene Knockout in Mouse Brain. CELL 87, 1317-1326 (1996).
    • (1996) CELL , vol.87 , pp. 1317-1326
    • Tsien, J.Z.1
  • 5
    • 84883216511 scopus 로고    scopus 로고
    • Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons
    • Satou, C. et al. Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons. Development 140, 3927-3931 (2013).
    • (2013) Development , vol.140 , pp. 3927-3931
    • Satou, C.1
  • 6
    • 34249087429 scopus 로고    scopus 로고
    • Genetic Single-Cell Mosaic Analysis Implicates ephrinB2 Reverse Signaling in Projections from the Posterior Tectum to the Hindbrain in Zebrafish
    • Sato, T., Hamaoka, T., Aizawa, H., Hosoya, T. & Okamoto, H. Genetic Single-Cell Mosaic Analysis Implicates ephrinB2 Reverse Signaling in Projections from the Posterior Tectum to the Hindbrain in Zebrafish. Journal of Neuroscience 27, 5271-5279 (2007).
    • (2007) Journal of Neuroscience , vol.27 , pp. 5271-5279
    • Sato, T.1    Hamaoka, T.2    Aizawa, H.3    Hosoya, T.4    Okamoto, H.5
  • 7
    • 84871303702 scopus 로고    scopus 로고
    • Brain selective transgene expression in zebrafish using an NRSE derived motif
    • Bergeron, S. A. et al. Brain selective transgene expression in zebrafish using an NRSE derived motif. Front. Neural Circuits 6, 110 (2012).
    • (2012) Front. Neural Circuits , vol.6 , pp. 110
    • Bergeron, S.A.1
  • 8
    • 39549113462 scopus 로고    scopus 로고
    • Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish
    • Asakawa, K. et al. Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish. Proceedings of the National Academy of Sciences 105, 1255-1260 (2008).
    • (2008) Proceedings of the National Academy of Sciences , vol.105 , pp. 1255-1260
    • Asakawa, K.1
  • 9
    • 34247899224 scopus 로고    scopus 로고
    • Targeting neural circuitry in zebrafish using GAL4 enhancer trapping
    • Scott, E. K. et al. Targeting neural circuitry in zebrafish using GAL4 enhancer trapping. Nat Meth 4, 323-326 (2007).
    • (2007) Nat Meth , vol.4 , pp. 323-326
    • Scott, E.K.1
  • 10
    • 84929962319 scopus 로고    scopus 로고
    • High-resolution analysis of central nervous system expression patterns in zebrafish Gal4 enhancer-trap lines
    • Otsuna, H. et al. High-resolution analysis of central nervous system expression patterns in zebrafish Gal4 enhancer-trap lines. Dev Dyn 244, 785-796 (2015).
    • (2015) Dev Dyn , vol.244 , pp. 785-796
    • Otsuna, H.1
  • 11
    • 77951198490 scopus 로고    scopus 로고
    • The cellular architecture of the larval zebrafish tectum, as revealed by gal4 enhancer trap lines
    • Scott, E. K. & Baier, H. The cellular architecture of the larval zebrafish tectum, as revealed by gal4 enhancer trap lines. Front. Neural Circuits 3, 13 (2009).
    • (2009) Front. Neural Circuits , vol.3 , pp. 13
    • Scott, E.K.1    Baier, H.2
  • 12
    • 45549103009 scopus 로고    scopus 로고
    • Gal4/UAS transgenic tools and their application to zebrafish
    • Halpern, M. E. et al. Gal4/UAS transgenic tools and their application to zebrafish. Zebrafish 5, 97-110 (2008).
    • (2008) Zebrafish , vol.5 , pp. 97-110
    • Halpern, M.E.1
  • 13
    • 0037819447 scopus 로고    scopus 로고
    • Transcription regulation and animal diversity
    • Levine, M. & Tjian, R. Transcription regulation and animal diversity. Nature 424, 147-151 (2003).
    • (2003) Nature , vol.424 , pp. 147-151
    • Levine, M.1    Tjian, R.2
  • 14
    • 0024502117 scopus 로고
    • And late periodic patterns of even skipped expression are controlled by distinct regulatory elements that respond to different spatial cues
    • Goto, T., Macdonald, P. & Maniatis, T. Early and late periodic patterns of even skipped expression are controlled by distinct regulatory elements that respond to different spatial cues. CELL 57, 413-422 (1989).
    • (1989) CELL , vol.57 , pp. 413-422
    • Goto, T.1    Macdonald, P.2    Early, M.T.3
  • 15
    • 80052456096 scopus 로고    scopus 로고
    • Rapid BAC selection for tol2-mediated transgenesis in zebrafish
    • Bussmann, J. & Schulte-Merker, S. Rapid BAC selection for tol2-mediated transgenesis in zebrafish. Development 138, 4327-4332 (2011).
    • (2011) Development , vol.138 , pp. 4327-4332
    • Bussmann, J.1    Schulte-Merker, S.2
  • 16
    • 84861721597 scopus 로고    scopus 로고
    • Transposon-mediated BAC transgenesis in zebrafish
    • Suster, M. L., Abe, G., Schouw, A. & Kawakami, K. Transposon-mediated BAC transgenesis in zebrafish. Nat Protoc 6, 1998-2021 (2011).
    • (2011) Nat Protoc , vol.6 , pp. 1998-2021
    • Suster, M.L.1    Abe, G.2    Schouw, A.3    Kawakami, K.4
  • 17
    • 84923289368 scopus 로고    scopus 로고
    • Coexpression analysis of nine neuropeptides in the neurosecretory preoptic area of larval zebrafish
    • Herget, U. & Ryu, S. Coexpression analysis of nine neuropeptides in the neurosecretory preoptic area of larval zebrafish. Front. Neuroanat 9, 5027 (2015).
    • (2015) Front. Neuroanat , vol.9 , pp. 5027
    • Herget, U.1    Ryu, S.2
  • 18
    • 33845728490 scopus 로고    scopus 로고
    • Hypocretin/orexin overexpression induces an insomnia-like phenotype in zebrafish
    • Prober, D. A., Rihel, J., Onah, A. A., Sung, R. J. & Schier, A. F. Hypocretin/Orexin Overexpression Induces An Insomnia-Like Phenotype in Zebrafish. Journal of Neuroscience 26, 13400-13410 (2006).
    • (2006) Journal of Neuroscience , vol.26 , pp. 13400-13410
    • Prober, D.A.1    Rihel, J.2    Onah, A.A.3    Sung, R.J.4    Schier, A.F.5
  • 19
    • 84867134597 scopus 로고    scopus 로고
    • Galanin gene expression and effects of its knock-down on the development of the nervous system in larval zebrafish
    • Podlasz, P. et al. Galanin gene expression and effects of its knock-down on the development of the nervous system in larval zebrafish. Journal of Comparative Neurology 520, 3846-3862 (2012).
    • (2012) Journal of Comparative Neurology , vol.520 , pp. 3846-3862
    • Podlasz, P.1
  • 20
    • 0036272520 scopus 로고    scopus 로고
    • Differential expression of two somatostatin genes during zebrafish embryonic development
    • Devos, N. et al. Differential expression of two somatostatin genes during zebrafish embryonic development. Mech Dev 115, 133-137 (2002).
    • (2002) Mech Dev , vol.115 , pp. 133-137
    • Devos, N.1
  • 21
    • 84948757965 scopus 로고    scopus 로고
    • A 3D searchable database of transgenic zebrafish Gal4 and Cre lines for functional neuroanatomy studies
    • Marquart, G. D. et al. A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies. Front. Neural Circuits 9, 78 (2015).
    • (2015) Front. Neural Circuits , vol.9 , pp. 78
    • Marquart, G.D.1
  • 22
    • 70349185646 scopus 로고    scopus 로고
    • FlEx-based transgenic reporter lines for visualization of Cre and Flp activity in live zebrafish
    • Boniface, E. J., Lu, J., Victoroff, T., Zhu, M. & Chen, W. FlEx-based transgenic reporter lines for visualization of Cre and Flp activity in live zebrafish. Genesis 47, 484-491 (2009).
    • (2009) Genesis , vol.47 , pp. 484-491
    • Boniface, E.J.1    Lu, J.2    Victoroff, T.3    Zhu, M.4    Chen, W.5
  • 23
    • 0037332503 scopus 로고    scopus 로고
    • Nonrigid image registration in shared-memory multiprocessor environments with application to brains, breasts, and bees
    • Rohlfing, T. & Maurer, C. R. Nonrigid image registration in shared-memory multiprocessor environments with application to brains, breasts, and bees. IEEE Trans Inf Technol Biomed 7, 16-25 (2003).
    • (2003) IEEE Trans Inf Technol Biomed , vol.7 , pp. 16-25
    • Rohlfing, T.1    Maurer, C.R.2
  • 24
    • 84946485840 scopus 로고    scopus 로고
    • Whole-brain activity mapping onto a zebrafish brain atlas
    • Randlett, O. et al. Whole-brain activity mapping onto a zebrafish brain atlas. Nat Meth 12, 1039-1046 (2015).
    • (2015) Nat Meth , vol.12 , pp. 1039-1046
    • Randlett, O.1
  • 25
    • 84964381173 scopus 로고    scopus 로고
    • Dense EM-based reconstruction of the interglomerular projectome in the zebrafish olfactory bulb
    • Wanner, A. A., Genoud, C., Masudi, T., Siksou, L. & Friedrich, R. W. Dense EM-based reconstruction of the interglomerular projectome in the zebrafish olfactory bulb. Nat Meth 19, 816-825 (2016).
    • (2016) Nat Meth , vol.19 , pp. 816-825
    • Wanner, A.A.1    Genoud, C.2    Masudi, T.3    Siksou, L.4    Friedrich, R.W.5
  • 26
    • 79551636783 scopus 로고    scopus 로고
    • A structural and functional ground plan for neurons in the hindbrain of zebrafish
    • Kinkhabwala, A. et al. A structural and functional ground plan for neurons in the hindbrain of zebrafish. Proc Natl Acad Sci USA 108, 1164-1169 (2011).
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 1164-1169
    • Kinkhabwala, A.1
  • 27
    • 77957375409 scopus 로고    scopus 로고
    • Focusing on optic tectum circuitry through the lens of genetics
    • Nevin, L. M., Robles, E., Baier, H. & Scott, E. K. Focusing on optic tectum circuitry through the lens of genetics. BMC Biol. 8, 126 (2010).
    • (2010) BMC Biol. , vol.8 , pp. 126
    • Nevin, L.M.1    Robles, E.2    Baier, H.3    Scott, E.K.4
  • 28
    • 0021047950 scopus 로고
    • Functional anatomy of the tectum mesencephali of the goldfish. An explorative analysis of the functional implications of the laminar structural organization of the tectum
    • Meek, J. Functional anatomy of the tectum mesencephali of the goldfish. An explorative analysis of the functional implications of the laminar structural organization of the tectum. Brain Research Reviews 6, 247-297 (1983).
    • (1983) Brain Research Reviews , vol.6 , pp. 247-297
    • Meek, J.1
  • 29
    • 21244461514 scopus 로고    scopus 로고
    • A GFP-based genetic screen reveals mutations that disrupt the architecture of the zebrafish retinotectal projection
    • Xiao, T., Roeser, T., Staub, W. & Baier, H. A GFP-based genetic screen reveals mutations that disrupt the architecture of the zebrafish retinotectal projection. Development 132, 2955-2967 (2005).
    • (2005) Development , vol.132 , pp. 2955-2967
    • Xiao, T.1    Roeser, T.2    Staub, W.3    Baier, H.4
  • 30
    • 79957645785 scopus 로고    scopus 로고
    • Characterization of genetically targeted neuron types in the zebrafish optic tectum
    • Robles, E., Smith, S. J. & Baier, H. Characterization of genetically targeted neuron types in the zebrafish optic tectum. Front. Neural Circuits 5, 1 (2011).
    • (2011) Front. Neural Circuits , vol.5 , pp. 1
    • Robles, E.1    Smith, S.J.2    Baier, H.3
  • 31
    • 80052968864 scopus 로고    scopus 로고
    • Gal80 intersectional regulation of cell ? Type specific expression in vertebrates
    • Fujimoto, E., Gaynes, B., Brimley, C. J., Chien, C.-B. & Bonkowsky, J. L. Gal80 intersectional regulation of cell?type specific expression in vertebrates. Dev Dyn 240, 2324-2334 (2011).
    • (2011) Dev Dyn , vol.240 , pp. 2324-2334
    • Fujimoto, E.1    Gaynes, B.2    Brimley, C.J.3    Chien, C.-B.4    Bonkowsky, J.L.5
  • 32
    • 77957367474 scopus 로고    scopus 로고
    • Filtering of visual information in the tectum by an identified neural circuit
    • Del Bene, F. et al. Filtering of visual information in the tectum by an identified neural circuit. Science 330, 669-673 (2010).
    • (2010) Science , vol.330 , pp. 669-673
    • Del Bene, F.1
  • 33
    • 84861431900 scopus 로고    scopus 로고
    • Brain-wide neuronal dynamics during motor adaptation in zebrafish
    • Ahrens, M. B. et al. Brain-wide neuronal dynamics during motor adaptation in zebrafish. Nature 485, 471-477 (2012).
    • (2012) Nature , vol.485 , pp. 471-477
    • Ahrens, M.B.1
  • 34
    • 84896308000 scopus 로고    scopus 로고
    • Functional architecture of an optic flow-responsive area that drives horizontal eye movements in zebrafish
    • Kubo, F. et al. Functional Architecture of an Optic Flow-Responsive Area that Drives Horizontal Eye Movements in Zebrafish. Neuron 81, 1344-1359 (2014).
    • (2014) Neuron , vol.81 , pp. 1344-1359
    • Kubo, F.1
  • 35
    • 80052259479 scopus 로고    scopus 로고
    • Spatial gradients and multidimensional dynamics in a neural integrator circuit
    • Miri, A. et al. Spatial gradients and multidimensional dynamics in a neural integrator circuit. Nat Neurosci 14, 1150-1159 (2011).
    • (2011) Nat Neurosci , vol.14 , pp. 1150-1159
    • Miri, A.1
  • 36
    • 70450215461 scopus 로고    scopus 로고
    • Genetic and optical targeting of neural circuits and behavior-zebrafish in the spotlight
    • Baier, H. & Scott, E. K. Genetic and optical targeting of neural circuits and behavior-zebrafish in the spotlight. Curr. Opin. Neurobiol. 19, 553-560 (2009).
    • (2009) Curr. Opin. Neurobiol. , vol.19 , pp. 553-560
    • Baier, H.1    Scott, E.K.2
  • 37
    • 84896282038 scopus 로고    scopus 로고
    • Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior
    • Portugues, R., Feierstein, C. E., Engert, F. & Orger, M. B. Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior. Neuron 81, 1328-1343 (2014).
    • (2014) Neuron , vol.81 , pp. 1328-1343
    • Portugues, R.1    Feierstein, C.E.2    Engert, F.3    Orger, M.B.4
  • 38
    • 84905495021 scopus 로고    scopus 로고
    • Descending control of swim posture by a midbrain nucleus in zebrafish
    • Thiele, T. R., Donovan, J. C. & Baier, H. Descending control of swim posture by a midbrain nucleus in zebrafish. Neuron 83, 679-691 (2014).
    • (2014) Neuron , vol.83 , pp. 679-691
    • Thiele, T.R.1    Donovan, J.C.2    Baier, H.3
  • 39
    • 84975497342 scopus 로고    scopus 로고
    • The cellular organization of zebrafish visuomotor circuits
    • Orger, M. B. The Cellular Organization of Zebrafish Visuomotor Circuits. Curr. Biol. 26, R377-85 (2016).
    • (2016) Curr. Biol. , vol.26 , pp. R377-R385
    • Orger, M.B.1
  • 41
    • 70349295632 scopus 로고    scopus 로고
    • Optogenetic dissection of a behavioural module in the vertebrate spinal cord
    • Wyart, C. et al. Optogenetic dissection of a behavioural module in the vertebrate spinal cord. Nature 461, 407-410 (2009).
    • (2009) Nature , vol.461 , pp. 407-410
    • Wyart, C.1
  • 42
    • 48049090049 scopus 로고    scopus 로고
    • Escape behavior elicited by single, channelrhodopsin-2-evoked spikes in zebrafish somatosensory neurons
    • Douglass, A. D., Kraves, S., Deisseroth, K., Schier, A. F. & Engert, F. Escape Behavior Elicited by Single, Channelrhodopsin-2-Evoked Spikes in Zebrafish Somatosensory Neurons. Current Biology 18, 1133-1137 (2008).
    • (2008) Current Biology , vol.18 , pp. 1133-1137
    • Douglass, A.D.1    Kraves, S.2    Deisseroth, K.3    Schier, A.F.4    Engert, F.5
  • 43
    • 84891722219 scopus 로고    scopus 로고
    • Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair
    • Auer, T. O., Duroure, K., De Cian, A., Concordet, J.-P. & Del Bene, F. Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair. Genome Research 24, 142-153 (2014).
    • (2014) Genome Research , vol.24 , pp. 142-153
    • Auer, T.O.1    Duroure, K.2    De Cian, A.3    Concordet, J.-P.4    Del Bene, F.5
  • 44
    • 84924365995 scopus 로고    scopus 로고
    • Precise in-frame integration of exogenous DNA mediated by CRISPR/Cas9 system in zebrafish
    • Hisano, Y. et al. Precise in-frame integration of exogenous DNA mediated by CRISPR/Cas9 system in zebrafish. Sci Rep 5, 8841 (2015).
    • (2015) Sci Rep , vol.5 , pp. 8841
    • Hisano, Y.1
  • 45
    • 84923334761 scopus 로고    scopus 로고
    • Efficient generation of knock-in transgenic zebrafish carrying reporter/ driver genes by CRISPR/Cas9-mediated genome engineering
    • Kimura, Y., Hisano, Y., Kawahara, A. & Higashijima, S.-I. Efficient generation of knock-in transgenic zebrafish carrying reporter/ driver genes by CRISPR/Cas9-mediated genome engineering. Sci Rep 4, 6545 (2014).
    • (2014) Sci Rep , vol.4 , pp. 6545
    • Kimura, Y.1    Hisano, Y.2    Kawahara, A.3    Higashijima, S.-I.4
  • 46
    • 84991447165 scopus 로고    scopus 로고
    • Functional visualization and disruption of targeted genes using CRISPR/Cas9-mediated eGFP reporter integration in zebrafish
    • Ota, S. et al. Functional visualization and disruption of targeted genes using CRISPR/Cas9-mediated eGFP reporter integration in zebrafish. Sci Rep 6, 34991 (2016).
    • (2016) Sci Rep , vol.6 , pp. 34991
    • Ota, S.1
  • 47
    • 84867785683 scopus 로고    scopus 로고
    • The dorsal raphe modulates sensory responsiveness during arousal in zebrafish
    • Yokogawa, T., Hannan, M. C. & Burgess, H. A. The Dorsal Raphe Modulates Sensory Responsiveness during Arousal in Zebrafish. Journal of Neuroscience 32, 15205-15215 (2012).
    • (2012) Journal of Neuroscience , vol.32 , pp. 15205-15215
    • Yokogawa, T.1    Hannan, M.C.2    Burgess, H.A.3
  • 48
    • 79251567058 scopus 로고    scopus 로고
    • Comprehensive catecholaminergic projectome analysis reveals singleneuron integration of zebrafish ascending and descending dopaminergic systems
    • Tay, T. L., Ronneberger, O., Ryu, S., Nitschke, R. & Driever, W. Comprehensive catecholaminergic projectome analysis reveals singleneuron integration of zebrafish ascending and descending dopaminergic systems. Nat Comms 2, 171 (2011).
    • (2011) Nat Comms , vol.2 , pp. 171
    • Tay, T.L.1    Ronneberger, O.2    Ryu, S.3    Nitschke, R.4    Driever, W.5
  • 49
    • 85020111943 scopus 로고    scopus 로고
    • Linking neurons to network function and behavior by two-photon holographic optogenetics and volumetric imaging
    • Dal Maschio, M., Donovan, J. C., Helmbrecht, T. O. & Baier, H. Linking Neurons to Network Function and Behavior by Two-Photon Holographic Optogenetics and Volumetric Imaging. Neuron 94(4), 774-789.e5 (2017).
    • (2017) Neuron , vol.94 , Issue.4 , pp. 774e5-789e5
    • Dal Maschio, M.1    Donovan, J.C.2    Helmbrecht, T.O.3    Baier, H.4
  • 51
    • 79953023671 scopus 로고    scopus 로고
    • Transgenerational analysis of transcriptional silencing in zebrafish
    • Akitake, C. M., Macurak, M., Halpern, M. E. & Goll, M. G. Transgenerational analysis of transcriptional silencing in zebrafish. Dev Biol 352, 191-201 (2011).
    • (2011) Dev Biol , vol.352 , pp. 191-201
    • Akitake, C.M.1    Macurak, M.2    Halpern, M.E.3    Goll, M.G.4
  • 52
    • 85019655911 scopus 로고    scopus 로고
    • Generation of high quality multi-view confocal 3D datasets of zebrafish larval brains suitable for analysis using Virtual Brain Explorer (ViBE-Z) software
    • Rath, M., Nitschke, R., Filippi, A., Ronneberger, O. & Driever, W. Generation of high quality multi-view confocal 3D datasets of zebrafish larval brains suitable for analysis using Virtual Brain Explorer (ViBE-Z) software. Protocol Exchange https://www.nature.com/protocolexchange/protocols/2408#/procedure (2012).
    • (2012) Protocol Exchange
    • Rath, M.1    Nitschke, R.2    Filippi, A.3    Ronneberger, O.4    Driever, W.5
  • 53
    • 84875893248 scopus 로고    scopus 로고
    • Clonal analysis of olfaction in Drosophila: Image registration
    • Ostrovsky, A., Cachero, S. & Jefferis, G. Clonal analysis of olfaction in Drosophila: image registration. Cold Spring Harbor Protocols 2013, 347-349 (2013).
    • (2013) Cold Spring Harbor Protocols , vol.2013 , pp. 347-349
    • Ostrovsky, A.1    Cachero, S.2    Jefferis, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.