High-resolution analysis of central nervous system expression patterns in zebrafish Gal4 enhancer-trap lines

Developmental Dynamics

Volumn 244, Issue 6, 2015, Pages 785-796

  Otsuna, Hideo ^a   Hutcheson, David A ^a   Duncan, Robert N ^a   McPherson, Adam D ^a   Scoresby, Aaron N ^a   Gaynes, Brooke F ^a   Tong, Zongzong ^a   Fujimoto, Esther ^a   Kwan, Kristen M ^a   Chien, Chi Bin ^a   Dorsky, Richard I ^a  

^a UNIVERSITY OF UTAH SCHOOL OF MEDICINE   (United States)

Author keywords

CNS; Confocal; Gal4; Neural circuit; Zebrafish

Indexed keywords

TRANSCRIPTION FACTOR GAL4; DNA BINDING PROTEIN; GAL4 PROTEIN, S CEREVISIAE; NERVE PROTEIN; PHOTOPROTEIN; RED FLUORESCENT PROTEIN; SACCHAROMYCES CEREVISIAE PROTEIN; SYNTHETIC DNA; TRANSCRIPTION FACTOR; TRANSPOSON; ZEBRAFISH PROTEIN;

ANIMAL EXPERIMENT; ARTICLE; CENTRAL NERVOUS SYSTEM; CONTROLLED STUDY; EMBRYO; ENHANCER REGION; IMAGE ANALYSIS; NEURAL CREST; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; SKIN EPITHELIUM; VASCULARIZATION; ZEBRA FISH; ANIMAL; ANTIBODY SPECIFICITY; BIOSYNTHESIS; EMBRYOLOGY; FACTUAL DATABASE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; NERVE CELL; PROCEDURES; REPORTER GENE; THREE DIMENSIONAL IMAGING; TRANSGENIC ANIMAL; TRANSPOSON;

DANIO RERIO;

ANIMALS; ANIMALS, GENETICALLY MODIFIED; CENTRAL NERVOUS SYSTEM; DATABASES, FACTUAL; DNA TRANSPOSABLE ELEMENTS; DNA-BINDING PROTEINS; ENHANCER ELEMENTS, GENETIC; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, REPORTER; GENES, SYNTHETIC; IMAGING, THREE-DIMENSIONAL; LUMINESCENT PROTEINS; MUTAGENESIS, INSERTIONAL; NERVE TISSUE PROTEINS; NEURONS; ORGAN SPECIFICITY; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION FACTORS; ZEBRAFISH; ZEBRAFISH PROTEINS;

EID: 84929962319     PISSN: 10588388     EISSN: 10970177     Source Type: Journal    
DOI: 10.1002/dvdy.24260     Document Type: Article

References (28)

1. Akitake CM, Macurak M, Halpern ME, Goll MG. 2011. Transgenerational analysis of transcriptional silencing in zebrafish. Dev Biol 352:191-201.
2. Asakawa K, Abe G, Kawakami K. 2013. Cellular dissection of the spinal cord motor column by BAC transgenesis and gene trapping in zebrafish. Front Neural Circuits 7:100.
3. Asakawa K, Suster ML, Mizusawa K, Nagayoshi S, Kotani T, Urasaki A, Kishimoto Y, Hibi M, Kawakami K. 2008. Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish. Proc Natl Acad Sci U S A 105:1255-1260.
4. Balciunas D, Wangensteen KJ, Wilber A, Bell J, Geurts A, Sivasubbu S, Wang X, Hackett PB, Largaespada DA, McIvor RS, Ekker SC. 2006. Harnessing a high cargo-capacity transposon for genetic applications in vertebrates. PLoS Genet 2:e169.
5. Balciuniene J, Balciunas D. 2013. Gene trapping using gal4 in zebrafish. J Vis Exp :e50113.
6. Brand AH, Perrimon N. 1993. Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development 118:401-415.
7. Campbell DS, Stringham SA, Timm A, Xiao T, Law MY, Baier H, Nonet ML, Chien CB. 2007. Slit1a inhibits retinal ganglion cell arborization and synaptogenesis via Robo2-dependent and -independent pathways. Neuron 55:231-245.
8. Curado S, Anderson RM, Jungblut B, Mumm J, Schroeter E, Stainier DY. 2007. Conditional targeted cell ablation in zebrafish: a new tool for regeneration studies. Dev Dyn 236:1025-1035.
9. Davison JM, Akitake CM, Goll MG, Rhee JM, Gosse N, Baier H, Halpern ME, Leach SD, Parsons MJ. 2007. Transactivation from Gal4-VP16 transgenic insertions for tissue-specific cell labeling and ablation in zebrafish. Dev Biol 304:811-824.
10. Douglass AD, Kraves S, Deisseroth K, Schier AF, Engert F. 2008. Escape behavior elicited by single, channelrhodopsin-2-evoked spikes in zebrafish somatosensory neurons. Curr Biol 18:1133-1137.
11. Eisenhoffer GT, Loftus PD, Yoshigi M, Otsuna H, Chien CB, Morcos PA, Rosenblatt J. 2012. Crowding induces live cell extrusion to maintain homeostatic cell numbers in epithelia. Nature 484:546-549.
12. Halpern ME, Rhee J, Goll MG, Akitake CM, Parsons M, Leach SD. 2008. Gal4/UAS transgenic tools and their application to zebrafish. Zebrafish 5:97-110.
13. Higashijima S, Masino MA, Mandel G, Fetcho JR. 2003. Imaging neuronal activity during zebrafish behavior with a genetically encoded calcium indicator. J Neurophysiol 90:3986-3997.
14. Koster RW, Fraser SE. 2001. Tracing transgene expression in living zebrafish embryos. Dev Biol 233:329-346.
15. Kwan KM, Fujimoto E, Grabher C, Mangum BD, Hardy ME, Campbell DS, Parant JM, Yost HJ, Kanki JP, Chien CB. 2007. The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs. Dev Dyn 236:3088-3099.
16. Li J, Mack JA, Souren M, Yaksi E, Higashijima S, Mione M, Fetcho JR, Friedrich RW. 2005. Early development of functional spatial maps in the zebrafish olfactory bulb. J Neurosci 25:5784-5795.
17. Mumm JS, Williams PR, Godinho L, Koerber A, Pittman AJ, Roeser T, Chien CB, Baier H, Wong RO. 2006. In vivo imaging reveals dendritic targeting of laminated afferents by zebrafish retinal ganglion cells. Neuron 52:609-621.
18. Ogura E, Okuda Y, Kondoh H, Kamachi Y. 2009. Adaptation of GAL4 activators for GAL4 enhancer trapping in zebrafish. Dev Dyn 238:641-655.
19. Otsuna H, Ito K. 2006. Systematic analysis of the visual projection neurons of Drosophila melanogaster. I. Lobula-specific pathways. J Comp Neurol 497:928-958.
20. Pisharath H, Rhee JM, Swanson MA, Leach SD, Parsons MJ. 2007. Targeted ablation of beta cells in the embryonic zebrafish pancreas using E. coli nitroreductase. Mech Dev 124:218-229.
21. Satou C, Kimura Y, Hirata H, Suster ML, Kawakami K, Higashijima S. 2013. Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons. Development 140:3927-3931.
22. Scheer N, Campos-Ortega JA. 1999. Use of the Gal4-UAS technique for targeted gene expression in the zebrafish. Mech Dev 80:153-158.
23. Scheer N, Groth A, Hans S, Campos-Ortega JA. 2001. An instructive function for Notch in promoting gliogenesis in the zebrafish retina. Development 128:1099-1107.
24. Scott EK. 2009. The Gal4/UAS toolbox in zebrafish: new approaches for defining behavioral circuits. J Neurochem 110:441-456.
25. Scott EK, Mason L, Arrenberg AB, Ziv L, Gosse NJ, Xiao T, Chi NC, Asakawa K, Kawakami K, Baier H. 2007. Targeting neural circuitry in zebrafish using GAL4 enhancer trapping. Nat Methods 4:323-326.
26. Szobota S, Gorostiza P, Del Bene F, Wyart C, Fortin DL, Kolstad KD, Tulyathan O, Volgraf M, Numano R, Aaron HL, Scott EK, Kramer RH, Flannery J, Baier H, Trauner D, Isacoff EY. 2007. Remote control of neuronal activity with a light-gated glutamate receptor. Neuron 54:535-545.
27. Wan Y, Otsuna H, Chien CB, Hansen C. 2009. An interactive visualization tool for multi-channel confocal microscopy data in neurobiology research. IEEE Trans Vis Comput Graph 15:1489-1496.
28. Wang X, Kopinke D, Lin J, McPherson AD, Duncan RN, Otsuna H, Moro E, Hoshijima K, Grunwald DJ, Argenton F, Chien CB, Murtaugh LC, Dorsky RI. 2012. Wnt signaling regulates postembryonic hypothalamic progenitor differentiation. Dev Cell 23:624-636.