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Bioinformatics
Volumn 33, Issue 13, 2017, Pages 2063-2064
DeepBlueR: Large-scale epigenomic analysis in R
Author keywords

[No Author keywords available]
Indexed keywords

EPIGENETICS; HUMAN; PROCEDURES; SOFTWARE;
EID: 85021798825     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btx099     Document Type: Article
Times cited : (7)
References (14)
  • 1
    • 84857980747 scopus 로고    scopus 로고
    • BLUEPRINT to decode the epigenetic signature written in blood
    • Adams, D., et al. (2012) BLUEPRINT to decode the epigenetic signature written in blood. Nat. Biotechnol., 30, 224-226.
    • (2012) Nat. Biotechnol. , vol.30 , pp. 224-226
    • Adams, D.1
  • 2
    • 84999225780 scopus 로고    scopus 로고
    • DeepBlue epigenomic data server: Programmatic data retrieval and analysis of epigenome region sets
    • Albrecht, F., et al. (2016) DeepBlue epigenomic data server: Programmatic data retrieval and analysis of epigenome region sets. Nucleic Acids Res., (i), gkw211.
    • (2016) Nucleic Acids Res. , Issue.1 , pp. gkw211
    • Albrecht, F.1
  • 3
    • 84997354424 scopus 로고    scopus 로고
    • The international human epigenome consortium data portal
    • Bujold, D., et al. (2016) The international human epigenome consortium data portal. Cell Syst., 3, 496-499.
    • (2016) Cell Syst. , vol.3 , pp. 496-499
    • Bujold, D.1
  • 4
    • 85021824063 scopus 로고    scopus 로고
    • Tcgabiolinks: An r/bioconductor package for integrative analysis of TCGA data
    • Colaprico, A., et al. (2015) Tcgabiolinks: An r/bioconductor package for integrative analysis of TCGA data. Nucleic Acids Res., gkv1507.
    • (2015) Nucleic Acids Res. , pp. gkv1507
    • Colaprico, A.1
  • 5
    • 84996946747 scopus 로고    scopus 로고
    • The blueprint data analysis portal
    • Fernandez, J. M., et al. (2016) The blueprint data analysis portal. Cell Syst., 3, 491-495.
    • (2016) Cell Syst. , vol.3 , pp. 491-495
    • Fernandez, J.M.1
  • 6
    • 84865760395 scopus 로고    scopus 로고
    • Gencode: The reference human genome annotation for the encode project
    • Harrow, J., et al. (2012) Gencode: The reference human genome annotation for the encode project. Genome Res., 22, 1760-1774.
    • (2012) Genome Res. , vol.22 , pp. 1760-1774
    • Harrow, J.1
  • 7
    • 84961289551 scopus 로고    scopus 로고
    • Orchestrating high-throughput genomic analysis with bioconductor
    • Huber, W., et al. (2015) Orchestrating high-throughput genomic analysis with bioconductor. Nat. Methods, 12, 115-121.
    • (2015) Nat. Methods , vol.12 , pp. 115-121
    • Huber, W.1
  • 8
    • 84923362619 scopus 로고    scopus 로고
    • Integrative analysis of 111 reference human epigenomes
    • Kundaje, A., et al. (2015) Integrative analysis of 111 reference human epigenomes. Nature, 518, 317-330.
    • (2015) Nature , vol.518 , pp. 317-330
    • Kundaje, A.1
  • 9
    • 84883368195 scopus 로고    scopus 로고
    • Software for computing and annotating genomic ranges
    • Lawrence, M., et al. (2013) Software for computing and annotating genomic ranges. PLoS Comput. Biol., 9, e1003118.
    • (2013) PLoS Comput. Biol. , vol.9 , pp. e1003118
    • Lawrence, M.1
  • 10
    • 84975753826 scopus 로고    scopus 로고
    • R Core Team. R Foundation for Statistical Computing, Vienna, Austria
    • R Core Team. (2016) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
    • (2016) R: A Language and Environment for Statistical Computing
  • 11
    • 84952873491 scopus 로고    scopus 로고
    • Lola: Enrichment analysis for genomic region sets and regulatory elements in r and bioconductor
    • Sheffield, N. C., Bock, C. (2016) Lola: Enrichment analysis for genomic region sets and regulatory elements in r and bioconductor. Bioinformatics, 32, 587-589.
    • (2016) Bioinformatics , vol.32 , pp. 587-589
    • Sheffield, N.C.1    Bock, C.2
  • 12
    • 84995912090 scopus 로고    scopus 로고
    • The international human epigenome consortium: A blueprint for scientific collaboration and discovery
    • Stunnenberg, H. G., et al. (2016) The international human epigenome consortium: A blueprint for scientific collaboration and discovery. Cell, 167, 1145-1149.
    • (2016) Cell , vol.167 , pp. 1145-1149
    • Stunnenberg, H.G.1
  • 13
    • 7444260846 scopus 로고    scopus 로고
    • The ENCODE (ENCyclopedia of DNA Elements) Project
    • The ENCODE Project Consortium.
    • The ENCODE Project Consortium. (2004) The ENCODE (ENCyclopedia Of DNA Elements) Project. Science, 306, 636-640.
    • (2004) Science , vol.306 , pp. 636-640
  • 14
    • 84939123947 scopus 로고    scopus 로고
    • The ensembl regulatory build
    • Zerbino, D. R., et al. (2015) The ensembl regulatory build. Genome Biol., 16, 1.
    • (2015) Genome Biol. , Issue.16 , pp. 1
    • Zerbino, D.R.1

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.