-
1
-
-
84979266084
-
Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers
-
Myer, P.R., Kim, M., Freetly, H.C., Smith, T.P.L., Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers. J. Microbiol. Methods. 127 (2016), 132–140, 10.1016/j.mimet.2016.06.004.
-
(2016)
J. Microbiol. Methods.
, vol.127
, pp. 132-140
-
-
Myer, P.R.1
Kim, M.2
Freetly, H.C.3
Smith, T.P.L.4
-
2
-
-
2442510059
-
Improved extraction of PCR-quality community DNA from digesta and fecal samples
-
Yu, Z., Morrison, M., Improved extraction of PCR-quality community DNA from digesta and fecal samples. Biotechniques 36:5 (2004), 808–813.
-
(2004)
Biotechniques
, vol.36
, Issue.5
, pp. 808-813
-
-
Yu, Z.1
Morrison, M.2
-
3
-
-
84932643480
-
Rumen microbiome from steers differing in feed efficiency
-
Myer, P.R., Smith, T.P.L., Wells, J.E., Kuehn, L.A., Freetly, H.C., Rumen microbiome from steers differing in feed efficiency. PLoS ONE, 10, 2015, e0129174, 10.1371/journal.pone.0129174.
-
(2015)
PLoS ONE
, vol.10
, pp. e0129174
-
-
Myer, P.R.1
Smith, T.P.L.2
Wells, J.E.3
Kuehn, L.A.4
Freetly, H.C.5
-
4
-
-
77952243141
-
Qiime allows analysis of high throughput community sequencing data
-
Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., Fierer, N., Peña, A.G., Goodrich, J.K., Gordon, J.I., Huttley, G.A., Kelley, S.T., Knights, D., Koenig, J.E., Ley, R.E., Lozupone, C.A., McDonald, D., Muegge, B.D., Pirrung, M., Reeder, J., Sevinsky, J.R., Turnbaugh, P.J., Walters, W.A., Widmann, J., Yatsunenko, T., Zaneveld, J., Knight, R., Qiime allows analysis of high throughput community sequencing data. Nat. Methods 7 (2010), 335–336, 10.1038/nmeth.f.303.
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Peña, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
5
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss, P.D., Westcott, S.L., Ryabin, T., et al. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol., 75(23), 2009, 10.1128/AEM.01541-09.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, Issue.23
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
-
6
-
-
84891787231
-
Ribosomal Database Project: data and tools for high throughput rRNA analysis
-
[PMID: 24288368]
-
Cole, J.R., Wang, Q., Fish, J.A., Chai, B., McGarrell, D.M., Sun, Y., Brown, C.T., Porras-Alfaro, A., Kuske, C.R., Tiedje, J.M., Ribosomal Database Project: data and tools for high throughput rRNA analysis. Nucl. Acids Res. 42:Database issue (2014), D633–D642, 10.1093/nar/gkt1244 [PMID: 24288368].
-
(2014)
Nucl. Acids Res.
, vol.42
, Issue.Database issue
, pp. D633-D642
-
-
Cole, J.R.1
Wang, Q.2
Fish, J.A.3
Chai, B.4
McGarrell, D.M.5
Sun, Y.6
Brown, C.T.7
Porras-Alfaro, A.8
Kuske, C.R.9
Tiedje, J.M.10
-
7
-
-
79952006773
-
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
-
Haas, B.J., Gevers, D., Earl, A.M., Feldgarden, M., Ward, D.V., Giannoukos, G., et al. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res. 21 (2011), 494–504, 10.1101/gr.112730.110.
-
(2011)
Genome Res.
, vol.21
, pp. 494-504
-
-
Haas, B.J.1
Gevers, D.2
Earl, A.M.3
Feldgarden, M.4
Ward, D.V.5
Giannoukos, G.6
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