A fast approximate algorithm for mapping long reads to large reference databases

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 10229 LNCS, Issue , 2017, Pages 66-81

  Jain, Chirag ^a,b   Dilthey, Alexander ^b   Koren, Sergey ^b   Aluru, Srinivas ^a   Phillippy, Adam M ^b  

^a GEORGIA INSTITUTE OF TECHNOLOGY   (United States)

^b NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

Jaccard; Long read mapping; MinHash; Minimizers; Nanopore; PacBio; Sketching; Winnowing

Indexed keywords

ALIGNMENT; CONFORMAL MAPPING; ESTIMATION; MOLECULAR BIOLOGY; NANOPORES; SCALABILITY;

JACCARD; MINHASH; MINIMIZERS; PACBIO; READ MAPPINGS; SKETCHING; WINNOWING;

MAPPING;

EID: 85018448144     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-319-56970-3_5     Document Type: Conference Paper

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