Amphibian abundance and detection trends during a large flood in a semi-arid floodplain wetland

Herpetological Conservation and Biology

Volumn 11, Issue 3, 2016, Pages 408-425

  Ocock, Joanne F ^a   Kingsford, Richard T ^a   Penman, Trent D ^b   Rowley, Jodi J L ^a,c  

^a UNIVERSITY OF NEW SOUTH WALES   (Australia)

^b UNIVERSITY OF WOLLONGONG   (Australia)

^c AUSTRALIAN MUSEUM   (Australia)

Author keywords

Abundance modeling; Australia; Environmental flows; Hylidae; Limnodynastidae; Macquarie marshes; Mytobatrachidae; River regulation

Indexed keywords

EID: 85018240830     PISSN: 21510733     EISSN: 19317603     Source Type: Journal    
DOI: None     Document Type: Article

References (65)

1. Altig, R., M.R. Whiles, and C.L. Taylor. 2007. What do tadpoles really eat? Assessing the trophic status of an understudied and imperiled group of consumers in freshwater habitats. Freshwater Biology 52: 386–395.
2. Amey, A.P., and G.C. Grigg. 1995. Lipid-reduced evaporative water loss in two arboreal hylid frogs. Comparative Biochemistry and Physiology Part A: Physiology 111: 283–291.
3. Anstis, M. 2013. Tadpoles and Frogs of Australia. New Holland Publishers, London, UK.
4. Arthington, A.H. 2012. Environmental flows: saving rivers in the third millennium. University of California Press, Berkeley and Los Angeles, California, USA.
5. Arthur, A D., J.R. W. Reid, R.T. Kingsford, H.M. McGinness, K.A. Ward, and M.J. Harper. 2012. Breeding flow thresholds of colonial breeding waterbirds in the Murray-Darling Basin, Australia. Wetlands 32: 257–265.
6. Baber, M.J., E. Fleishman, K.J. Babbitt, and T.L. Tarr. 2004. The relationship between wetland hydroperiod and nestedness patterns in assemblages of larval amphibians and predatory macroinvertebrates. Oikos 107: 16–27.
7. Balcombe, S.R., J.S. Lobegeiger, S.M. Marshall, J.C. Marshall, D. Ly, and D.N. Jones. 2012. Fish body condition and recruitment success reflect antecedent flows in an Australian dryland river. Fisheries Science 78: 841–847.
8. Booth, D.T. 2006. Effect of soil type on burrowing behavior and cocoon formation in the Green-striped Burrowing Frog, Cyclorana alboguttata. Canadian Journal of Zoology-Revue Canadienne De Zoologie 84: 832–838.
9. Boulton, A.J., F. Sheldon, and K.M. Jenkins. 2006. Natural disturbance and aquatic invertebrates in desert rivers. Pp. 133–153 In Ecology of Desert Rivers. Kingsford, R.T. (Ed.). Cambridge University Press, Cambridge, England.
10. Brock, M.A., S.J. Capon, and J.L. Porter. 2006. Disturbance of plant communities dependent on desert rivers. Pp. 100–132 In Ecology of Desert Rivers. Kingsford, R.T. (Ed.). Cambridge University Press, Cambridge, England.
11. Brooker, M., and J. Wombey. 1986. Some observations on the herpetofauna of the Macquarie Marshes region, NSW, with special reference to Chelidae. Australian Zoologist 23: 1–4.
12. Bunn, S.E., M.C. Thoms, S.K. Hamilton, and S.J. Capon. 2006. Flow variability in dryland rivers: boom, bust and the bits in between. River Research and Applications 22: 179–186.
13. Burnham, K.P., and D. Anderson. 2002. Model Selection and Multi-model Inference: A Practical Information-theoretic Approach. 2nd Edition. Springer, New York, New York, USA.
14. Canessa, S., G.W. Heard, K.M. Parris, and M.A. McCarthy. 2012. Integrating variability in detection probabilities when designing wildlife surveys: a case study of amphibians from south-eastern Australia. Biodiversity and Conservation 21: 729–744.
15. Cartledge, V.A., P.C. Withers, K.A. McMaster, G.G. Thompson, and S.D. Bradshaw. 2006. Water balance of field-excavated aestivating Australian desert frogs, the cocoon-forming Neobatrachus aquilonius and the non-cocooning Notaden nichollsi (Amphibia: Myobatrachidae). Journal of Experimental Biology 209: 3309–3321.
16. Chan-McLeod, A.C.A. 2003. Factors affecting the permeability of clearcuts to Red-legged Frogs. Journal of Wildlife Management 67: 663–671.
17. Dayton, G.H., R.E. Jung, and S. Droege. 2004. Large-scale habitat associations of four desert anurans in Big Bend National Park, Texas. Journal of Herpetology 38: 619–627.
18. Dostine, P.L., S.J. Reynolds, A.D. Griffiths, and G.R. Gillespie. 2013. Factors influencing detection probabilities of frogs in the monsoonal tropics of northern Australia: implications for the design of monitoring studies. Wildlife Research 40: 393–402.
19. Eskew, E.A., S.J. Price, and M.E. Dorcas. 2012. Effects of river-flow regulation on anuran occupancy and abundance in riparian zones. Conservation Biology 26: 504–512.
20. Fiske, I.J., and R.B. Chandler. 2011. Unmarked: an R package for fitting hierarchical models of wildlife occurrence and abundance. Journal of Statistical Software 43: 1–23.
21. Frost, D. 2015. Amphibian Species of the World: an Online Reference. Version 6.0 (April 2015). Electronic Database accessible at http://research.amnh.org/herpetology/amphibia/index.html.American Museum of Natural History, New York, New York, USA.
22. Gu, W.D., and R.K. Swihart. 2004. Absent or undetected? Effects of non-detection of species occurrence on wildlife-habitat models. Biological Conservation 116: 195–203.
23. Haining, R.P. 2003. Spatial Data Analysis. Cambridge University Press, Cambridge, UK.
24. Hanski, I. 1998. Metapopulation dynamics. Nature 396: 41–49.
25. Indermaur, L., B.R. Schmidt, K. Tockner, and M. Schaub. 2010. Spatial variation in abiotic and biotic factors in a floodplain determine anuran body size and growth rate at metamorphosis. Oecologia 163: 637–649.
26. Joseph, L.N., C. Elkin, T.G. Martin, and H.P. Possingham. 2009. Modeling abundance using N-mixture models: the importance of considering ecological mechanisms. Ecological Applications 19: 631–642.
27. Kingsford, R.T. 2000. Ecological impacts of dams, water diversions and river management on floodplain wetlands in Australia. Austral Ecology 25: 109–127.
28. Kingsford, R.T., and R.F. Thomas. 1995. The Macquarie Marshes in arid Australia and their waterbirds-a 50-year history of decline. Environmental Management 19: 867–878.
29. Kingsford, R.T., A.L. Curtin, and J. Porter. 1999. Water flows on Cooper Creek in arid Australia determine ‘boom’ and ‘bust’ periods for waterbirds. Biological Conservation 88: 231–248.
30. Kingsford, R.T., A. Georges, and P.J. Unmack. 2006. Vertebrates of desert rivers: meeting the challenges of temporal and spatial unpredictability. Pp. 154–200 In Ecology of Desert Rivers. Kingsford, R.T. (Ed.). Cambridge University Press, Cambridge, United Kingdom.
31. Kupferberg, S.J., W.J. Palen, A.J. Lind, S. Bobzien, A. Catenazzi, J. Drennan, and M. E. Power. 2012. Effects of flow regimes altered by dams on survival, population declines, and range-wide losses of California river-breeding frogs. Conservation Biology 26: 513–524.
32. Lee, A.K., and E.H. Mercer. 1967. Cocoon surrounding desert-dwelling frogs. Science 157: 87–89.
33. Lytle, D.A. 2001. Disturbance regimes and life-history evolution. American Naturalist 157: 525–536.
34. MacKenzie, D.I., J.D. Nichols, G.B. Lachman, S. Droege, J. Andrew Royle, and C.A. Langtimm. 2002. Estimating site occupancy rates when detection probabilities are less than one. Ecology 83: 2248–2255.
35. Mazerolle, M.J., L.L. Bailey, W.L. Kendall, J.A. Royle, S.J. Converse, and J.D. Nichols. 2007. Making great leaps forward: accounting for detectability in herpetological field studies. Journal of Herpetology 41: 672–689.
36. McGinness, H.M., A.D. Arthur, K.A. Ward, and P.A. Ward. 2014. Floodplain amphibian abundance: responses to flooding and habitat type in Barmah Forest, Murray River, Australia. Wildlife Research 41: 149-162.
37. Mims, M.C., and J.D. Olden. 2012. Life history theory predicts fish assemblage response to hydrologic regimes. Ecology 93: 35–45.
38. Navas, C.A. 1996. The effect of temperature on the vocal activity of tropical anurans: a comparison of high and low-elevation species. Journal of Herpetology 30: 488–497.
39. Nilsson, C., C.A. Reidy, M. Dynesius, and C. Revenga. 2005. Fragmentation and flow regulation of the world’s large river systems. Science 308: 405–408.
40. O’Brien, R.M. 2007. A caution regarding rules of thumb for variance inflation factors. Quality & Quantity 41: 673-690.
41. Ocock, J.F., R.T. Kingsford, T.D. Penman, and J.J. Rowley. 2014. Frogs during the flood: differential behaviours of two amphibian species in a dryland floodplain wetland. Austral Ecology 39: 929–940.
42. Pellet, J., and B.R. Schmidt. 2005. Monitoring distributions using call surveys: estimating site occupancy, detection probabilities and inferring absence. Biological Conservation 123: 27–35.
43. R Core Team. (2014). R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. Available at http://www.R-project.org.
44. Read, J.L. 1999. Abundance and recruitment patterns of the Trilling Frog (Neobatrachus centralis) in the Australian arid zone. Australian Journal of Zoology 47: 393–404.
45. Ren, S.Q., R.T. Kingsford, and R.F. Thomas. 2010. Modelling flow to and inundation of the Macquarie Marshes in arid Australia. Environmetrics 21: 549–561.
46. Roberts, J.D., and F. Marston. 2000. Water Regime of Wetland and Floodplain Plants in the Murray-Darling Basin: A Source Book of Ecological Knowledge. CSIRO Publishing, Canberra, Australian Captial Territory, Australia.
47. Royle, J.A. 2004. N-mixture models for estimating population size from spatially replicated counts. Biometrics 60: 108–115.
48. Royle, J.A., and R. Dorazio. 2008. Hierarchical Modeling and Inference in Ecology: The Analysis of Data from Populations, Metapopulations and Communities. Elsevier, Boston, Massachusetts, USA.
49. Royle, J.A., M. Kéry, R. Gautier, and H. Schmid. 2007. Hierarchical spatial models of abundance and occurrence from imperfect survey data. Ecological Monographs 77: 465–481.
50. Semlitsch, R.D., and J.R. Bodie. 2003. Biological criteria for buffer zones around wetlands and riparian habitats for amphibians and reptiles. Conservation Biology 17: 1219–1228.
51. Shelley, D. 2005. Flora and fauna of the Macquarie Marshes region. Department of Infrastruture, Planning and Natural Resources, Dubbo, New South Wales, Australia.
52. Slatyer, C., D. Rosauer, and F. Lemckert. 2007. An assessment of endemism and species richness patterns in the Australian Anura. Journal of Biogeography 34: 583–596.
53. Stromberg, J.C., P.B. Shafroth, and A.F. Hazelton. 2012. Legacies of flood reduction on a dryland river. River Research and Applications 28: 143–159.
54. Thomas, R.F., R.T. Kingsford, Y. Lu, and S.J. Hunter. 2011. Landsat mapping of annual inundation (1979–2006) of the Macquarie Marshes in semi-arid Australia. International Journal of Remote Sensing 32: 4545–4569.
55. Thomas, R.F., R.T. Kingsford, Y. Lu, S.J. Cox, N.C. Sims, and S.J. Hunter. 2015. Mapping inundation in the heterogeneous floodplain wetlands of the Macquarie Marshes, using Landsat Thematic Mapper. Journal of Hydrology 524: 194–213.
56. Threlfall, C., B. Law, T. Penman, and P.B. Banks. 2011. Ecological processes in urban landscapes: mechanisms influencing the distribution and activity of insectivorous bats. Ecography 34: 814–826.
57. Tockner, K., I. Klaus, C. Baumgartner, and J.V. Ward. 2006. Amphibian diversity and nestedness in a dynamic floodplain river (Tagliamento, NE-Italy). Hydrobiologia 565: 121–133.
58. Tracy, C.R., K.A. Christian, and C.R. Tracy. 2010. Not just small, wet, and cold: effects of body size and skin resistance on thermoregulation and arboreality of frogs. Ecology 91: 1477–1484.
59. Walker, K.F., F. Sheldon, and J.T. Puckridge. 1995. A perspective on dryland river ecosystems. Regulated Rivers-Research & Management 11: 85–104.
60. Wassens, S., and M. Maher. 2011. River regulation influences the composition and distribution of inland frog communities. River Research and Applications 27: 238–246.
61. Wassens, S., R.J. Watts, A. Jansen, and D. Roshier. 2008. Movement patterns of Southern Bell Frogs (Litoria raniformis) in response to flooding. Wildlife Research 35: 50–58.
62. Wells, K.D. 2007. The Ecology and Behaviour of Amphibians. University of Chicago, USA.
63. Wilson, R. 1992. Vegetation Map of the Macquarie Marshes. NSW National Parks and Wildlife Service, Sydney, New South Wales, Australia.
64. Withers, P.C. 1995. Cocoon formation and structure in the aestivating Australian desert frogs, Neobatrachus and Cyclorana. Australian Journal of Zoology 43: 429–441.
65. Young, J.E., K.A. Christian, S. Donnellan, C.R. Tracy, and D. Parry. 2005. Comparative analysis of cutaneous evaporative water loss in frogs demonstrates correlation with ecological habits. Physiological and Biochemical Zoology 78: 847–856