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Volumn 8, Issue , 2014, Pages

Genotype imputation accuracy with different reference panels in admixed populations

Author keywords

[No Author keywords available]

Indexed keywords

AFRICAN; ASIAN; CHROMOSOME 3; CONFERENCE PAPER; EUROPEAN; GENETIC ANALYSIS; GENETIC VARIATION; GENOTYPING TECHNIQUE; HUMAN; MEXICAN AMERICAN; NEXT GENERATION SEQUENCING; SINGLE NUCLEOTIDE POLYMORPHISM; WHOLE GENOME SEQUENCING;

EID: 85018193345     PISSN: None     EISSN: 17536561     Source Type: Journal    
DOI: 10.1186/1753-6561-8-S1-S64     Document Type: Conference Paper
Times cited : (15)

References (12)
  • 1
    • 77958102016 scopus 로고    scopus 로고
    • Statistical analysis strategies for association studies involving rare variants
    • 10.1038/nrg2867 3743540 1:CAS:528:DC%2BC3cXhtlShsLvI 20940738
    • Bansal V, Libiger O, Torkamani A, Schork NJ: Statistical analysis strategies for association studies involving rare variants. Nat Rev Genet. 2010, 11: 773-785. 10.1038/nrg2867.
    • (2010) Nat Rev Genet , vol.11 , pp. 773-785
    • Bansal, V.1    Libiger, O.2    Torkamani, A.3    Schork, N.J.4
  • 2
    • 79956314887 scopus 로고    scopus 로고
    • Genotype and SNP calling from next-generation sequencing data
    • 10.1038/nrg2986 3593722 1:CAS:528:DC%2BC3MXmtFymsL4%3D 21587300
    • Nielsen R, Paul JS, Albrechtsen A, Song YS: Genotype and SNP calling from next-generation sequencing data. Nat Rev Genet. 2011, 12: 443-451. 10.1038/nrg2986.
    • (2011) Nat Rev Genet , vol.12 , pp. 443-451
    • Nielsen, R.1    Paul, J.S.2    Albrechtsen, A.3    Song, Y.S.4
  • 3
    • 77953808087 scopus 로고    scopus 로고
    • Genotype imputation for genome-wide association studies
    • 10.1038/nrg2796 1:CAS:528:DC%2BC3cXovVekurs%3D 20517342
    • Marchini J, Howie B: Genotype imputation for genome-wide association studies. Nat Rev Genet. 2010, 11: 499-511. 10.1038/nrg2796.
    • (2010) Nat Rev Genet , vol.11 , pp. 499-511
    • Marchini, J.1    Howie, B.2
  • 4
    • 67651222400 scopus 로고    scopus 로고
    • A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
    • 10.1371/journal.pgen.1000529 2689936 19543373
    • Howie BN, Donnelly P, Marchini J: A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet. 2009, 5: e1000529-10.1371/journal.pgen.1000529.
    • (2009) PLoS Genet , vol.5 , pp. e1000529
    • Howie, B.N.1    Donnelly, P.2    Marchini, J.3
  • 5
    • 84863845193 scopus 로고    scopus 로고
    • Genotype imputation with thousands of genomes
    • 2011
    • Howie B, Marchini J, Stephens M: Genotype imputation with thousands of genomes. G3 (Bethesda). 2011, 1: 457-470. 2011.
    • (2011) G3 (Bethesda) , vol.1 , pp. 457-470
    • Howie, B.1    Marchini, J.2    Stephens, M.3
  • 6
    • 62649089065 scopus 로고    scopus 로고
    • Genotype-imputation accuracy across worldwide human populations
    • 10.1016/j.ajhg.2009.01.013 2668016 1:CAS:528:DC%2BD1MXisFCrtL0%3D 19215730
    • Huang L, Li Y, Singleton AB, Hardy JA, Abecasis G, Rosenberg NA, Scheet P: Genotype-imputation accuracy across worldwide human populations. Am J Hum Genet. 2009, 84: 235-250. 10.1016/j.ajhg.2009.01.013.
    • (2009) Am J Hum Genet , vol.84 , pp. 235-250
    • Huang, L.1    Li, Y.2    Singleton, A.B.3    Hardy, J.A.4    Abecasis, G.5    Rosenberg, N.A.6    Scheet, P.7
  • 8
    • 84864383723 scopus 로고    scopus 로고
    • Practical consideration of genotype imputation: Sample size, window size, reference choice, and untyped rate
    • 10.4310/SII.2011.v4.n3.a8 3269888 22308193
    • Zhang B, Zhi D, Zhang K, Gao G, Limdi NA, Liu N: Practical consideration of genotype imputation: sample size, window size, reference choice, and untyped rate. Stat Interface. 2011, 4: 339-352. 10.4310/SII.2011.v4.n3.a8.
    • (2011) Stat Interface , vol.4 , pp. 339-352
    • Zhang, B.1    Zhi, D.2    Zhang, K.3    Gao, G.4    Limdi, N.A.5    Liu, N.6
  • 10
    • 85018473804 scopus 로고    scopus 로고
    • PLINK
    • PLINK. [ http://pngu.mgh.harvard.edu/purcell/plink/ ]
  • 12
    • 85018460352 scopus 로고    scopus 로고
    • GTOOL
    • GTOOL. [ http://www.well.ox.ac.uk/~cfreeman/software/gwas/gtool.html ]


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.