-
1
-
-
84874263817
-
Abrupt emergence of a single dominant multidrug-resistant strain of Escherichia coli
-
Johnson JR, Tchesnokova V, Johnston B, Clabots C, Roberts PL, Billig M, Riddell K, Rogers P, Qin X, Butler-Wu S, Price LB, Aziz M, Nicolas-Chanoine MH, Debroy C, Robicsek A, Hansen G, Urban C, Platell J, Trott DJ, Zhanel G, Weissman SJ, Cookson BT, Fang FC, Limaye AP, Scholes D, Chattopadhyay S, Hooper DC, Sokurenko EV. 2013. Abrupt emergence of a single dominant multidrug-resistant strain of Escherichia coli. J Infect Dis 207:919-928. http://dx.doi.org/10.1093/ infdis/jis933
-
(2013)
J Infect Dis
, vol.207
, pp. 919-928
-
-
Johnson, J.R.1
Tchesnokova, V.2
Johnston, B.3
Clabots, C.4
Roberts, P.L.5
Billig, M.6
Riddell, K.7
Rogers, P.8
Qin, X.9
Butler-Wu, S.10
Price, L.B.11
Aziz, M.12
Nicolas-Chanoine, M.H.13
Debroy, C.14
Robicsek, A.15
Hansen, G.16
Urban, C.17
Platell, J.18
Trott, D.J.19
Zhanel, G.20
Weissman, S.J.21
Cookson, B.T.22
Fang, F.C.23
Limaye, A.P.24
Scholes, D.25
Chattopadhyay, S.26
Hooper, D.C.27
Sokurenko, E.V.28
more..
-
2
-
-
84903616595
-
Escherichia coli ST131, an intriguing clonal group
-
Nicolas-Chanoine MH, Bertrand X, Madec JY. 2014. Escherichia coli ST131, an intriguing clonal group. Clin Microbiol Rev 27:543-574. http:// dx.doi.org/10.1128/CMR.00125-13
-
(2014)
Clin Microbiol Rev
, vol.27
, pp. 543-574
-
-
Nicolas-Chanoine, M.H.1
Bertrand, X.2
Madec, J.Y.3
-
3
-
-
84930244320
-
The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrugresistant Enterobacteriaceae
-
Mathers AJ, Peirano G, Pitout JD. 2015. The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrugresistant Enterobacteriaceae. Clin Microbiol Rev 28:565-591. http:// dx.doi.org/10.1128/CMR.00116-14
-
(2015)
Clin Microbiol Rev
, vol.28
, pp. 565-591
-
-
Mathers, A.J.1
Peirano, G.2
Pitout, J.D.3
-
4
-
-
85017113272
-
Molecular characterization of the multidrug resistant Escherichia coli ST131 clone
-
Schembri MA, Zakour NL, Phan MD, Forde BM, Stanton-Cook M, Beatson SA. 2015. Molecular characterization of the multidrug resistant Escherichia coli ST131 clone. Pathogens 4:422-430. http://dx.doi.org/ 10.3390/pathogens4030422
-
(2015)
Pathogens
, vol.4
, pp. 422-430
-
-
Schembri, M.A.1
Zakour, N.L.2
Phan, M.D.3
Forde, B.M.4
Stanton-Cook, M.5
Beatson, S.A.6
-
5
-
-
84891591168
-
The epidemic of extended-spectrum-beta-lactamaseproducing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx
-
Price LB, Johnson JR, Aziz M, Clabots C, Johnston B, Tchesnokova V, Nordstrom L, Billig M, Chattopadhyay S, Stegger M, Andersen PS, Pearson T, Riddell K, Rogers P, Scholes D, Kahl B, Keim P, Sokurenko EV. 2013. The epidemic of extended-spectrum-beta-lactamaseproducing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx. mBio 4:e00377-13. http://dx.doi.org/10.1128/ mBio.00377-13
-
(2013)
mBio
, vol.4
-
-
Price, L.B.1
Johnson, J.R.2
Aziz, M.3
Clabots, C.4
Johnston, B.5
Tchesnokova, V.6
Nordstrom, L.7
Billig, M.8
Chattopadhyay, S.9
Stegger, M.10
Andersen, P.S.11
Pearson, T.12
Riddell, K.13
Rogers, P.14
Scholes, D.15
Kahl, B.16
Keim, P.17
Sokurenko, E.V.18
-
6
-
-
84965137942
-
Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131
-
Stoesser N, Sheppard AE, Pankhurst L, De Maio N, Moore CE, Sebra R, Turner P, Anson LW, Kasarskis A, Batty EM, Kos V, Wilson DJ, Phetsouvanh R, Wyllie D, Sokurenko E, Manges AR, Johnson TJ, Price LB, Peto TE, Johnson JR, Didelot X, Walker AS, Crook DW. 2016. Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131. mBio 7:e02162-15. http://dx.doi.org/10.1128/ mBio.02162-15
-
(2016)
mBio
, vol.7
-
-
Stoesser, N.1
Sheppard, A.E.2
Pankhurst, L.3
De Maio, N.4
Moore, C.E.5
Sebra, R.6
Turner, P.7
Anson, L.W.8
Kasarskis, A.9
Batty, E.M.10
Kos, V.11
Wilson, D.J.12
Phetsouvanh, R.13
Wyllie, D.14
Sokurenko, E.15
Manges, A.R.16
Johnson, T.J.17
Price, L.B.18
Peto, T.E.19
Johnson, J.R.20
Didelot, X.21
Walker, A.S.22
Crook, D.W.23
more..
-
7
-
-
84965125519
-
Sequential acquisition of virulence and fluoroquinolone resistance has shaped the evolution of Escherichia coli ST131
-
Ben Zakour NL, Alsheikh-Hussain AS, Ashcroft MM, Khanh Nhu NT, Roberts LW, Stanton-Cook M, Schembri MA, Beatson SA. 2016. Sequential acquisition of virulence and fluoroquinolone resistance has shaped the evolution of Escherichia coli ST131. mBio 7:e00347-16. http:// dx.doi.org/10.1128/mBio.00347-16
-
(2016)
mBio
, vol.7
-
-
Ben Zakour, N.L.1
Alsheikh-Hussain, A.S.2
Ashcroft, M.M.3
Khanh Nhu, N.T.4
Roberts, L.W.5
Stanton-Cook, M.6
Schembri, M.A.7
Beatson, S.A.8
-
8
-
-
84929497327
-
Molecular characterization of a multidrug resistance IncF plasmid from the globally disseminated Escherichia coli ST131 clone
-
Phan MD, Forde BM, Peters KM, Sarkar S, Hancock S, Stanton-Cook M, Ben Zakour NL, Upton M, Beatson SA, Schembri MA. 2015. Molecular characterization of a multidrug resistance IncF plasmid from the globally disseminated Escherichia coli ST131 clone. PLoS One 10: e0122369. http://dx.doi.org/10.1371/journal.pone.0122369
-
(2015)
PLoS One
, vol.10
-
-
Phan, M.D.1
Forde, B.M.2
Peters, K.M.3
Sarkar, S.4
Hancock, S.5
Stanton-Cook, M.6
Ben Zakour, N.L.7
Upton, M.8
Beatson, S.A.9
Schembri, M.A.10
-
9
-
-
84982150789
-
Complete nucleotide sequences of bla(CTX-M)-harboring IncF plasmids from communityassociated Escherichia coli strains in the United States
-
Li JJ, Spychala CN, Hu F, Sheng JF, Doi Y. 2015. Complete nucleotide sequences of bla(CTX-M)-harboring IncF plasmids from communityassociated Escherichia coli strains in the United States. Antimicrob Agents Chemother 59:3002-3007. http://dx.doi.org/10.1128/AAC.04772-14
-
(2015)
Antimicrob Agents Chemother
, vol.59
, pp. 3002-3007
-
-
Li, J.J.1
Spychala, C.N.2
Hu, F.3
Sheng, J.F.4
Doi, Y.5
-
10
-
-
84919629934
-
-
PLoS Genet 10 :e1004766. h t t p: / / d x . d o i . o r g / 1 0 . 1 3 7 1 / journal.pgen.1004766
-
Lanza VF, de Toro M, Garcillán-Barcia MP, Mora A, Blanco J, Coque TM, de la Cruz F. 2014. Plasmid flux in Escherichia coli ST131 sublineages, analyzed by plasmid constellation network (PLACNET), a new method for plasmid reconstruction from whole genome sequences. PLoS Genet 1 0 :e1004766. h t t p: / / d x . d o i . o r g / 1 0 . 1 3 7 1 / journal.pgen.1004766
-
(2014)
Plasmid flux in Escherichia coli ST131 sublineages, analyzed by plasmid constellation network (PLACNET), a new method for plasmid reconstruction from whole genome sequences
-
-
Lanza, V.F.1
de Toro, M.2
Garcillán-Barcia, M.P.3
Mora, A.4
Blanco, J.5
Coque, T.M.6
de la Cruz, F.7
-
11
-
-
84937640527
-
Effect of plasmids harbouring blaCTX-M on the virulence and fitness of Escherichia coli ST131 isolates
-
Shin J, Ko KS. 2015. Effect of plasmids harbouring blaCTX-M on the virulence and fitness of Escherichia coli ST131 isolates. Int J Antimicrob Agents 46:214-218. http://dx.doi.org/10.1016/j.ijantimicag.2015.04.012
-
(2015)
Int J Antimicrob Agents
, vol.46
, pp. 214-218
-
-
Shin, J.1
Ko, K.S.2
-
12
-
-
85007452944
-
Complete genome sequence of a carbapenem-resistant extraintestinal pathogenic Escherichia coli strain belonging to the sequence type 131 H30R subclade
-
Johnson TJ, Hargreaves M, Shaw K, Snippes P, Lynfield R, Aziz M, Price LB. 2015. Complete genome sequence of a carbapenem-resistant extraintestinal pathogenic Escherichia coli strain belonging to the sequence type 131 H30R subclade. Genome Announc 3:e00272-15. http:// dx.doi.org/10.1128/genomeA.00272-15
-
(2015)
Genome Announc
, vol.3
-
-
Johnson, T.J.1
Hargreaves, M.2
Shaw, K.3
Snippes, P.4
Lynfield, R.5
Aziz, M.6
Price, L.B.7
-
13
-
-
84999723822
-
Complete genome sequence of the epidemic and highly virulent CTX-M-15-producing H30-Rx subclone of Escherichia coli ST131
-
Andersen PS, Stegger M, Aziz M, Contente-Cuomo T, Gibbons HS, Keim P, Sokurenko EV, Johnson JR, Price LB. 2013. Complete genome sequence of the epidemic and highly virulent CTX-M-15-producing H30-Rx subclone of Escherichia coli ST131. Genome Announc 1:e00988-13. http://dx.doi.org/10.1128/genomeA.00988-13
-
(2013)
Genome Announc
, vol.1
-
-
Andersen, P.S.1
Stegger, M.2
Aziz, M.3
Contente-Cuomo, T.4
Gibbons, H.S.5
Keim, P.6
Sokurenko, E.V.7
Johnson, J.R.8
Price, L.B.9
-
14
-
-
77955289397
-
Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences
-
Smet A, Van Nieuwerburgh F, Vandekerckhove TT, Martel A, Deforce D, Butaye P, Haesebrouck F. 2010. Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences. PLoS One 5:e11202. http://dx.doi.org/10.1371/journal.pone.0011202
-
(2010)
PLoS One
, vol.5
-
-
Smet, A.1
Van Nieuwerburgh, F.2
Vandekerckhove, T.T.3
Martel, A.4
Deforce, D.5
Butaye, P.6
Haesebrouck, F.7
-
15
-
-
70349315444
-
Complete nucleotide sequences of plasmids pEK204, pEK499, and pEK516, encoding CTX-M enzymes in three major Escherichia coli lineages from the United Kingdom, all belonging to the international O25:H4-ST131 clone
-
Woodford N, Carattoli A, Karisik E, Underwood A, Ellington MJ, Livermore DM. 2009. Complete nucleotide sequences of plasmids pEK204, pEK499, and pEK516, encoding CTX-M enzymes in three major Escherichia coli lineages from the United Kingdom, all belonging to the international O25:H4-ST131 clone. Antimicrob Agents Chemother 53: 4472-4482. http://dx.doi.org/10.1128/AAC.00688-09
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 4472-4482
-
-
Woodford, N.1
Carattoli, A.2
Karisik, E.3
Underwood, A.4
Ellington, M.J.5
Livermore, D.M.6
-
16
-
-
84925470770
-
The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone
-
Forde BM, Ben Zakour NL, Stanton-Cook M, Phan MD, Totsika M, Peters KM, Chan KG, Schembri MA, Upton M, Beatson SA. 2014. The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone. PLoS One 9:e104400. http://dx.doi.org/ 10.1371/journal.pone.0104400
-
(2014)
PLoS One
, vol.9
-
-
Forde, B.M.1
Ben Zakour, N.L.2
Stanton-Cook, M.3
Phan, M.D.4
Totsika, M.5
Peters, K.M.6
Chan, K.G.7
Schembri, M.A.8
Upton, M.9
Beatson, S.A.10
-
17
-
-
33645827531
-
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach
-
Chen SL, Hung CS, Xu J, Reigstad CS, Magrini V, Sabo A, Blasiar D, Bieri T, Meyer RR, Ozersky P, Armstrong JR, Fulton RS, Latreille JP, Spieth J, Hooton TM, Mardis ER, Hultgren SJ, Gordon JI. 2006. Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. Proc Natl Acad Sci U S A 103:5977-5982. http://dx.doi.org/10.1073/ pnas.0600938103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 5977-5982
-
-
Chen, S.L.1
Hung, C.S.2
Xu, J.3
Reigstad, C.S.4
Magrini, V.5
Sabo, A.6
Blasiar, D.7
Bieri, T.8
Meyer, R.R.9
Ozersky, P.10
Armstrong, J.R.11
Fulton, R.S.12
Latreille, J.P.13
Spieth, J.14
Hooton, T.M.15
Mardis, E.R.16
Hultgren, S.J.17
Gordon, J.I.18
-
18
-
-
84873525066
-
The IncF plasmid pRSB225 isolated from a municipal wastewater treatment plant's on-site preflooder combining antibiotic resistance and putative virulence functions is highly related to virulence plasmids identified in pathogenic E. coli isolates
-
Wibberg D, Szczepanowski R, Eikmeyer F, Pühler A, Schlüter A. 2013. The IncF plasmid pRSB225 isolated from a municipal wastewater treatment plant's on-site preflooder combining antibiotic resistance and putative virulence functions is highly related to virulence plasmids identified in pathogenic E. coli isolates. Plasmid 69:127-137. http:// dx.doi.org/10.1016/j.plasmid.2012.11.001
-
(2013)
Plasmid
, vol.69
, pp. 127-137
-
-
Wibberg, D.1
Szczepanowski, R.2
Eikmeyer, F.3
Pühler, A.4
Schlüter, A.5
-
19
-
-
67049133080
-
A module located at a chromosomal integration hot spot is responsible for the multidrug resistance of a reference strain from Escherichia coli clonal group A
-
Lescat M, Calteau A, Hoede C, Barbe V, Touchon M, Rocha E, Tenaillon O, Médigue C, Johnson JR, Denamur E. 2009. A module located at a chromosomal integration hot spot is responsible for the multidrug resistance of a reference strain from Escherichia coli clonal group A. Antimicrob Agents Chemother 53:2283-2288. http:// dx.doi.org/10.1128/AAC.00123-09
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 2283-2288
-
-
Lescat, M.1
Calteau, A.2
Hoede, C.3
Barbe, V.4
Touchon, M.5
Rocha, E.6
Tenaillon, O.7
Médigue, C.8
Johnson, J.R.9
Denamur, E.10
-
20
-
-
85009982924
-
Complete genome sequence of a CTX-M-15-producing Escherichia coli strain from the H30Rx subclone of sequence type 131 from a patient with recurrent urinary tract infections, closely related to a lethal urosepsis isolate from the patient's sister
-
Johnson TJ, Aziz M, Liu CM, Sokurenko E, Kisiela DI, Paul S, Andersen P, Johnson JR, Price LB. 2016. Complete genome sequence of a CTX-M-15-producing Escherichia coli strain from the H30Rx subclone of sequence type 131 from a patient with recurrent urinary tract infections, closely related to a lethal urosepsis isolate from the patient's sister. Genome Announc 4:e00334-16. http://dx.doi.org/10.1128/ genomeA.00334-16
-
(2016)
Genome Announc
, vol.4
-
-
Johnson, T.J.1
Aziz, M.2
Liu, C.M.3
Sokurenko, E.4
Kisiela, D.I.5
Paul, S.6
Andersen, P.7
Johnson, J.R.8
Price, L.B.9
-
21
-
-
77950269123
-
Virulence plasmid harbored by uropathogenic Escherichia coli functions in acute stages of pathogenesis
-
Cusumano CK, Hung CS, Chen SL, Hultgren SJ. 2010. Virulence plasmid harbored by uropathogenic Escherichia coli functions in acute stages of pathogenesis. Infect Immun 78:1457-1467. http://dx.doi.org/ 10.1128/IAI.01260-09
-
(2010)
Infect Immun
, vol.78
, pp. 1457-1467
-
-
Cusumano, C.K.1
Hung, C.S.2
Chen, S.L.3
Hultgren, S.J.4
-
22
-
-
30744441214
-
DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains
-
Johnson TJ, Siek KE, Johnson SJ, Nolan LK. 2006. DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains. J Bacteriol 188:745-758. http://dx.doi.org/10.1128/JB.188.2.745-758.2006
-
(2006)
J Bacteriol
, vol.188
, pp. 745-758
-
-
Johnson, T.J.1
Siek, K.E.2
Johnson, S.J.3
Nolan, L.K.4
-
23
-
-
0037422561
-
Identification of pathogenspecific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain
-
Dozois CM, Daigle F, Curtiss R III. 2003. Identification of pathogenspecific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain. Proc Natl Acad Sci U S A 100:247-252. http:// dx.doi.org/10.1073/pnas.232686799
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 247-252
-
-
Dozois, C.M.1
Daigle, F.2
Curtiss, R.3
-
24
-
-
84936970574
-
Insertion sequence IS26 reorganizes plasmids in clinically isolated multidrug-resistant bacteria by replicative transposition
-
He S, Hickman AB, Varani AM, Siguier P, Chandler M, Dekker JP, Dyda F. 2015. Insertion sequence IS26 reorganizes plasmids in clinically isolated multidrug-resistant bacteria by replicative transposition. mBio 6:e00762. http://dx.doi.org/10.1128/mBio.00762-15
-
(2015)
mBio
, vol.6
-
-
He, S.1
Hickman, A.B.2
Varani, A.M.3
Siguier, P.4
Chandler, M.5
Dekker, J.P.6
Dyda, F.7
-
25
-
-
27644465186
-
DNA sequence and comparative genomics of pAPEC-O2-R, an avian pathogenic Escherichia coli transmissible R plasmid
-
Johnson TJ, Siek KE, Johnson SJ, Nolan LK. 2005. DNA sequence and comparative genomics of pAPEC-O2-R, an avian pathogenic Escherichia coli transmissible R plasmid. Antimicrob Agents Chemother 49: 4681-4688. http://dx.doi.org/10.1128/AAC.49.11.4681-4688.2005
-
(2005)
Antimicrob Agents Chemother
, vol.49
, pp. 4681-4688
-
-
Johnson, T.J.1
Siek, K.E.2
Johnson, S.J.3
Nolan, L.K.4
-
26
-
-
33847231339
-
Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship
-
De Gelder L, Ponciano JM, Joyce P, Top EM. 2007. Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship. Microbiology 153:452-463. http://dx.doi.org/10.1099/ mic.0.2006/001784-0
-
(2007)
Microbiology
, vol.153
, pp. 452-463
-
-
De Gelder, L.1
Ponciano, J.M.2
Joyce, P.3
Top, E.M.4
-
27
-
-
84964317828
-
Carriage of extended-spectrum betalactamase-plasmids does not reduce fitness but enhances virulence in some strains of pandemic E. coli lineages
-
Schaufler K, Semmler T, Pickard DJ, de Toro M, de la Cruz F, Wieler LH, Ewers C, Guenther S. 2016. Carriage of extended-spectrum betalactamase-plasmids does not reduce fitness but enhances virulence in some strains of pandemic E. coli lineages. Front Microbiol 7:336. http:// dx.doi.org/10.3389/fmicb.2016.00336
-
(2016)
Front Microbiol
, vol.7
, pp. 336
-
-
Schaufler, K.1
Semmler, T.2
Pickard, D.J.3
de Toro, M.4
de la Cruz, F.5
Wieler, L.H.6
Ewers, C.7
Guenther, S.8
-
28
-
-
84879017399
-
The comprehensive antibiotic resistance database
-
McArthur AG, Waglechner N, Nizam F, Yan A, Azad MA, Baylay AJ, Bhullar K, Canova MJ, De Pascale G, Ejim L, Kalan L, King AM, Koteva K, Morar M, Mulvey MR, O'Brien JS, Pawlowski AC, Piddock LJ, Spanogiannopoulos P, Sutherland AD, Tang I, Taylor PL, Thaker M, Wang W, Yan M, Yu T, Wright GD. 2013. The comprehensive antibiotic resistance database. Antimicrob Agents Chemother 57: 3348-3357. http://dx.doi.org/10.1128/AAC.00419-13
-
(2013)
Antimicrob Agents Chemother
, vol.57
, pp. 3348-3357
-
-
McArthur, A.G.1
Waglechner, N.2
Nizam, F.3
Yan, A.4
Azad, M.A.5
Baylay, A.J.6
Bhullar, K.7
Canova, M.J.8
De Pascale, G.9
Ejim, L.10
Kalan, L.11
King, A.M.12
Koteva, K.13
Morar, M.14
Mulvey, M.R.15
O'Brien, J.S.16
Pawlowski, A.C.17
Piddock, L.J.18
Spanogiannopoulos, P.19
Sutherland, A.D.20
Tang, I.21
Taylor, P.L.22
Thaker, M.23
Wang, W.24
Yan, M.25
Yu, T.26
Wright, G.D.27
more..
-
29
-
-
84903160552
-
In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing
-
Carattoli A, Zankari E, García-Fernández A, Voldby Larsen M, Lund O, Villa L, Møller Aarestrup F, Hasman H. 2014. In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing. Antimicrob Agents Chemother 58:3895-3903. http:// dx.doi.org/10.1128/AAC.02412-14
-
(2014)
Antimicrob Agents Chemother
, vol.58
, pp. 3895-3903
-
-
Carattoli, A.1
Zankari, E.2
García-Fernández, A.3
Voldby Larsen, M.4
Lund, O.5
Villa, L.6
Møller Aarestrup, F.7
Hasman, H.8
-
30
-
-
84861334159
-
Comparing thousands of circular genomes using the CGView comparison tool
-
Grant JR, Arantes AS, Stothard P. 2012. Comparing thousands of circular genomes using the CGView comparison tool. BMC Genomics 13:202. http://dx.doi.org/10.1186/1471-2164-13-202
-
(2012)
BMC Genomics
, vol.13
, pp. 202
-
-
Grant, J.R.1
Arantes, A.S.2
Stothard, P.3
-
31
-
-
3543051830
-
Mauve: multiple alignment of conserved genomic sequence with rearrangements
-
Darling AC, Mau B, Blattner FR, Perna NT. 2004. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res 14:1394-1403. http://dx.doi.org/10.1101/gr.2289704
-
(2004)
Genome Res
, vol.14
, pp. 1394-1403
-
-
Darling, A.C.1
Mau, B.2
Blattner, F.R.3
Perna, N.T.4
-
32
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
33
-
-
0028924342
-
A general method for detecting and sizing large plasmids
-
Barton BM, Harding GP, Zuccarelli AJ. 1995. A general method for detecting and sizing large plasmids. Anal Biochem 226:235-240. http:// dx.doi.org/10.1006/abio.1995.1220
-
(1995)
Anal Biochem
, vol.226
, pp. 235-240
-
-
Barton, B.M.1
Harding, G.P.2
Zuccarelli, A.J.3
-
34
-
-
84861142358
-
Transcriptome mapping of pAR060302, a blaCMY-2-positive broad-host-range IncA/C plasmid
-
Lang KS, Danzeisen JL, Xu W, Johnson TJ. 2012. Transcriptome mapping of pAR060302, a blaCMY-2-positive broad-host-range IncA/C plasmid. Appl Environ Microbiol 78:3379-3386. http://dx.doi.org/10.1128/ AEM.07199-11
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 3379-3386
-
-
Lang, K.S.1
Danzeisen, J.L.2
Xu, W.3
Johnson, T.J.4
-
35
-
-
67649910490
-
Epidemic clonal groups of Escherichia coli as a cause of antimicrobial-resistant urinary tract infections in Canada, 2002 to 2004
-
Johnson JR, Menard M, Johnston B, Kuskowski MA, Nichol K, Zhanel GG. 2009. Epidemic clonal groups of Escherichia coli as a cause of antimicrobial-resistant urinary tract infections in Canada, 2002 to 2004. Antimicrob Agents Chemother 53:2733-2739. http://dx.doi.org/ 10.1128/AAC.00297-09
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 2733-2739
-
-
Johnson, J.R.1
Menard, M.2
Johnston, B.3
Kuskowski, M.A.4
Nichol, K.5
Zhanel, G.G.6
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