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Volumn 7, Issue 3, 2010, Pages

RNA recognition motifs involved in nuclear import of RNA-binding proteins

Author keywords

mRNA export; Nuclear localization signal; Ribonucleoprotein complex; RNA recognition motif; RNA binding protein; Trypanosoma

Indexed keywords


EID: 85011940040     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.7.3.12087     Document Type: Review
Times cited : (25)

References (37)
  • 1
    • 36749081534 scopus 로고    scopus 로고
    • Crossing the nuclear envelope: Hierarchical regulation of nucleocytoplasmic transport
    • Terry LJ, Shows EB, Wente SR. Crossing the nuclear envelope: hierarchical regulation of nucleocytoplasmic transport. Science 2007; 318:1412-6.
    • (2007) Science , vol.318 , pp. 1412-1416
    • Terry, L.J.1    Shows, E.B.2    Wente, S.R.3
  • 2
    • 34247135913 scopus 로고    scopus 로고
    • Classical nuclear localization signals: Definition, function and interaction with importin alpha
    • Lange A, Mills RE, Lange CJ, Stewart M, Devine SE, Corbett AH. Classical nuclear localization signals: definition, function and interaction with importin alpha. J Biol Chem 2007; 282:5101-5.
    • (2007) J Biol Chem , vol.282 , pp. 5101-5105
    • Lange, A.1    Mills, R.E.2    Lange, C.J.3    Stewart, M.4    Devine, S.E.5    Corbett, A.H.6
  • 3
    • 0028930155 scopus 로고
    • A nuclear localization domain in the hnRNP A1 protein
    • Siomi H, Dreyfuss G. A nuclear localization domain in the hnRNP A1 protein. J Cell Biol 1995; 129:551-60.
    • (1995) J Cell Biol , vol.129 , pp. 551-560
    • Siomi, H.1    Dreyfuss, G.2
  • 4
    • 0032431026 scopus 로고    scopus 로고
    • HNS, a nuclear-cytoplasmic shuttling sequence in HuR
    • Fan XC, Steitz JA. HNS, a nuclear-cytoplasmic shuttling sequence in HuR. Proc Natl Acad Sci USA 1998; 95:15293-8.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 15293-15298
    • Fan, X.C.1    Steitz, J.A.2
  • 5
    • 71749108548 scopus 로고    scopus 로고
    • An RNA recognition motif mediates the nucleocytoplasmic transport of a trypanosome RNA-binding protein
    • Cassola A, Frasch AC. An RNA recognition motif mediates the nucleocytoplasmic transport of a trypanosome RNA-binding protein. J Biol Chem 2009; 284:35015-28.
    • (2009) J Biol Chem , vol.284 , pp. 35015-35028
    • Cassola, A.1    Frasch, A.C.2
  • 6
    • 30544447679 scopus 로고    scopus 로고
    • Identification of the sequence determinants mediating the nucleo-cytoplasmic shuttling of TIAR and TIA-1 RNA-binding proteins
    • Zhang T, Delestienne N, Huez G, Kruys V, Gueydan C. Identification of the sequence determinants mediating the nucleo-cytoplasmic shuttling of TIAR and TIA-1 RNA-binding proteins. J Cell Sci 2005; 118:5453-63.
    • (2005) J Cell Sci , vol.118 , pp. 5453-5463
    • Zhang, T.1    Delestienne, N.2    Huez, G.3    Kruys, V.4    Gueydan, C.5
  • 7
    • 0032538933 scopus 로고    scopus 로고
    • Nuclear import and the evolution of a multifunctional RNA-binding protein
    • Rosenblum JS, Pemberton LF, Bonifaci N, Blobel G. Nuclear import and the evolution of a multifunctional RNA-binding protein. J Cell Biol 1998; 143:887-99.
    • (1998) J Cell Biol , vol.143 , pp. 887-899
    • Rosenblum, J.S.1    Pemberton, L.F.2    Bonifaci, N.3    Blobel, G.4
  • 8
    • 0032557655 scopus 로고    scopus 로고
    • The human poly(A)-binding protein 1 shuttles between the nucleus and the cytoplasm
    • Afonina E, Stauber R, Pavlakis GN. The human poly(A)-binding protein 1 shuttles between the nucleus and the cytoplasm. J Biol Chem 1998; 273:13015-21.
    • (1998) J Biol Chem , vol.273 , pp. 13015-13021
    • Afonina, E.1    Stauber, R.2    Pavlakis, G.N.3
  • 9
    • 15444366645 scopus 로고    scopus 로고
    • Yeast poly(A)-binding protein Pab1 shuttles between the nucleus and the cytoplasm and functions in mRNA export
    • Brune C, Munchel SE, Fischer N, Podtelejnikov AV, Weis K. Yeast poly(A)-binding protein Pab1 shuttles between the nucleus and the cytoplasm and functions in mRNA export. Rna 2005; 11:517-31.
    • (2005) Rna , vol.11 , pp. 517-531
    • Brune, C.1    Munchel, S.E.2    Fischer, N.3    Podtelejnikov, A.V.4    Weis, K.5
  • 10
    • 18544377013 scopus 로고    scopus 로고
    • The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression
    • Maris C, Dominguez C, Allain FH. The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression. Febs J 2005; 272:2118-31.
    • (2005) Febs J , vol.272 , pp. 2118-2131
    • Maris, C.1    Dominguez, C.2    Allain, F.H.3
  • 11
    • 0028129989 scopus 로고
    • Conserved structures and diversity of functions of RNA-binding proteins
    • Burd CG, Dreyfuss G. Conserved structures and diversity of functions of RNA-binding proteins. Science 1994; 265:615-21.
    • (1994) Science , vol.265 , pp. 615-621
    • Burd, C.G.1    Dreyfuss, G.2
  • 13
    • 18444383371 scopus 로고    scopus 로고
    • Protein families and RNA recognition
    • Chen Y, Varani G. Protein families and RNA recognition. Febs J 2005; 272:2088-97.
    • (2005) Febs J , vol.272 , pp. 2088-2097
    • Chen, Y.1    Varani, G.2
  • 14
    • 33750222859 scopus 로고    scopus 로고
    • Sequence-specific binding of single-stranded RNA: Is there a code for recognition?
    • Auweter SD, Oberstrass FC, Allain FH. Sequence-specific binding of single-stranded RNA: is there a code for recognition? Nucleic Acids Res 2006; 34:4943-59.
    • (2006) Nucleic Acids Res , vol.34 , pp. 4943-4959
    • Auweter, S.D.1    Oberstrass, F.C.2    Allain, F.H.3
  • 15
    • 0037384759 scopus 로고    scopus 로고
    • RNA-binding proteins and mRNA turnover in trypanosomes
    • D'Orso I, De Gaudenzi JG, Frasch AC. RNA-binding proteins and mRNA turnover in trypanosomes. Trends Parasitol 2003; 19:151-5.
    • (2003) Trends Parasitol , vol.19 , pp. 151-155
    • D'Orso, I.1    De Gaudenzi, J.G.2    Frasch, A.C.3
  • 17
    • 0033636996 scopus 로고    scopus 로고
    • The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing
    • Forch P, Puig O, Kedersha N, Martinez C, Granneman S, Seraphin B, et al. The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing. Mol Cell 2000; 6:1089-98.
    • (2000) Mol Cell , vol.6 , pp. 1089-1098
    • Forch, P.1    Puig, O.2    Kedersha, N.3    Martinez, C.4    Granneman, S.5    Seraphin, B.6
  • 18
    • 0042971860 scopus 로고    scopus 로고
    • U1 snRNP-dependent function of TIAR in the regulation of alternative RNA processing of the human calcitonin/CGRP pre-mRNA
    • Zhu H, Hasman RA, Young KM, Kedersha NL, Lou H. U1 snRNP-dependent function of TIAR in the regulation of alternative RNA processing of the human calcitonin/CGRP pre-mRNA. Mol Cell Biol 2003; 23:5959-71.
    • (2003) Mol Cell Biol , vol.23 , pp. 5959-5971
    • Zhu, H.1    Hasman, R.A.2    Young, K.M.3    Kedersha, N.L.4    Lou, H.5
  • 20
    • 12544258221 scopus 로고    scopus 로고
    • Translational control of beta2-adrenergic receptor mRNA by T-cell-restricted intracellular antigen-related protein
    • Kandasamy K, Joseph K, Subramaniam K, Raymond JR, Tholanikunnel BG. Translational control of beta2-adrenergic receptor mRNA by T-cell-restricted intracellular antigen-related protein. J Biol Chem 2005; 280:1931-43.
    • (2005) J Biol Chem , vol.280 , pp. 1931-1943
    • Kandasamy, K.1    Joseph, K.2    Subramaniam, K.3    Raymond, J.R.4    Tholanikunnel, B.G.5
  • 21
    • 0034254553 scopus 로고    scopus 로고
    • TIA-1 is a translational silencer that selectively regulates the expression of TNFalpha
    • Piecyk M, Wax S, Beck AR, Kedersha N, Gupta M, Maritim B, et al. TIA-1 is a translational silencer that selectively regulates the expression of TNFalpha. EMBO J 2000; 19:4154-63.
    • (2000) EMBO J , vol.19 , pp. 4154-4163
    • Piecyk, M.1    Wax, S.2    Beck, A.R.3    Kedersha, N.4    Gupta, M.5    Maritim, B.6
  • 22
    • 0033611157 scopus 로고    scopus 로고
    • RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2alpha to the assembly of mammalian stress granules
    • Kedersha NL, Gupta M, Li W, Miller I, Anderson P. RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2alpha to the assembly of mammalian stress granules. J Cell Biol 1999; 147:1431-42.
    • (1999) J Cell Biol , vol.147 , pp. 1431-1442
    • Kedersha, N.L.1    Gupta, M.2    Li, W.3    Miller, I.4    Anderson, P.5
  • 23
    • 33645824089 scopus 로고    scopus 로고
    • Evidence that poly(A) binding protein C1 binds nuclear pre-mRNA poly(A) tails
    • Hosoda N, Lejeune F, Maquat LE. Evidence that poly(A) binding protein C1 binds nuclear pre-mRNA poly(A) tails. Mol Cell Biol 2006; 26:3085-97.
    • (2006) Mol Cell Biol , vol.26 , pp. 3085-3097
    • Hosoda, N.1    Lejeune, F.2    Maquat, L.E.3
  • 24
    • 2442482777 scopus 로고    scopus 로고
    • Structure and function of poly(A) binding proteins
    • Kuhn U, Wahle E. Structure and function of poly(A) binding proteins. Biochim Biophys Acta 2004; 1678:67-84.
    • (2004) Biochim Biophys Acta , vol.1678 , pp. 67-84
    • Kuhn, U.1    Wahle, E.2
  • 25
    • 0029871812 scopus 로고    scopus 로고
    • Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae
    • Caponigro G, Parker R. Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae. Microbiol Rev 1996; 60:233-49.
    • (1996) Microbiol Rev , vol.60 , pp. 233-249
    • Caponigro, G.1    Parker, R.2
  • 26
    • 0030731419 scopus 로고    scopus 로고
    • Starting at the beginning, middle and end: Translation initiation in eukaryotes
    • Sachs AB, Sarnow P, Hentze MW. Starting at the beginning, middle and end: translation initiation in eukaryotes. Cell 1997; 89:831-8.
    • (1997) Cell , vol.89 , pp. 831-838
    • Sachs, A.B.1    Sarnow, P.2    Hentze, M.W.3
  • 27
    • 4444361092 scopus 로고    scopus 로고
    • Multiple domains control the subcellular localization and activity of ETR-3, a regulator of nuclear and cytoplasmic RNA processing events
    • Ladd AN, Cooper TA. Multiple domains control the subcellular localization and activity of ETR-3, a regulator of nuclear and cytoplasmic RNA processing events. J Cell Sci 2004; 117:3519-29.
    • (2004) J Cell Sci , vol.117 , pp. 3519-3529
    • Ladd, A.N.1    Cooper, T.A.2
  • 28
    • 33744980908 scopus 로고    scopus 로고
    • Mammalian CELF/Bruno-like RNA-binding proteins: Molecular characteristics and biological functions
    • Barreau C, Paillard L, Mereau A, Osborne HB. Mammalian CELF/Bruno-like RNA-binding proteins: molecular characteristics and biological functions. Biochimie 2006; 88:515-25.
    • (2006) Biochimie , vol.88 , pp. 515-525
    • Barreau, C.1    Paillard, L.2    Mereau, A.3    Osborne, H.B.4
  • 29
    • 37549042839 scopus 로고    scopus 로고
    • Cancer-causing mutations in a novel transcription-dependent nuclear export motif of VHL abrogate oxygen-dependent degradation of hypoxia-inducible factor
    • Khacho M, Mekhail K, Pilon-Larose K, Payette J, Lee S. Cancer-causing mutations in a novel transcription-dependent nuclear export motif of VHL abrogate oxygen-dependent degradation of hypoxia-inducible factor. Mol Cell Biol 2008; 28:302-14.
    • (2008) Mol Cell Biol , vol.28 , pp. 302-314
    • Khacho, M.1    Mekhail, K.2    Pilon-Larose, K.3    Payette, J.4    Lee, S.5
  • 30
    • 0035860828 scopus 로고    scopus 로고
    • TcUBP-1, a developmentally regulated U-rich RNA-binding protein involved in selective mRNA destabilization in trypanosomes
    • D'Orso I, Frasch AC. TcUBP-1, a developmentally regulated U-rich RNA-binding protein involved in selective mRNA destabilization in trypanosomes. J Biol Chem 2001; 276:34801-9.
    • (2001) J Biol Chem , vol.276 , pp. 34801-34809
    • D'Orso, I.1    Frasch, A.C.2
  • 31
    • 34447572786 scopus 로고    scopus 로고
    • Recruitment of mRNAs to cytoplasmic ribonucleoprotein granules in trypanosomes
    • Cassola A, De Gaudenzi JG, Frasch AC. Recruitment of mRNAs to cytoplasmic ribonucleoprotein granules in trypanosomes. Mol Microbiol 2007; 65:655-70.
    • (2007) Mol Microbiol , vol.65 , pp. 655-670
    • Cassola, A.1    De Gaudenzi, J.G.2    Frasch, A.C.3
  • 32
    • 0037184949 scopus 로고    scopus 로고
    • TcUBP-1, an mRNA destabilizing factor from trypanosomes, homodimerizes and interacts with novel AU-rich element- And Poly(A)- binding proteins forming a ribonucleoprotein complex
    • D'Orso I, Frasch AC. TcUBP-1, an mRNA destabilizing factor from trypanosomes, homodimerizes and interacts with novel AU-rich element- and Poly(A)- binding proteins forming a ribonucleoprotein complex. J Biol Chem 2002; 277:50520-8.
    • (2002) J Biol Chem , vol.277 , pp. 50520-50528
    • D'Orso, I.1    Frasch, A.C.2
  • 33
    • 0142247085 scopus 로고    scopus 로고
    • Trans and cis splicing in trypanosomatids: Mechanism, factors and regulation
    • Liang XH, Haritan A, Uliel S, Michaeli S. trans and cis splicing in trypanosomatids: mechanism, factors and regulation. Eukaryot Cell 2003; 2:830-40.
    • (2003) Eukaryot Cell , vol.2 , pp. 830-840
    • Liang, X.H.1    Haritan, A.2    Uliel, S.3    Michaeli, S.4
  • 34
    • 60549085443 scopus 로고    scopus 로고
    • Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes
    • Noe G, De Gaudenzi JG, Frasch AC. Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes. BMC Mol Biol 2008; 9:107.
    • (2008) BMC Mol Biol , vol.9 , pp. 107
    • Noe, G.1    De Gaudenzi, J.G.2    Frasch, A.C.3
  • 36
    • 14844355725 scopus 로고    scopus 로고
    • NMR Structural Study of TcUBP1, a Single RRM Domain Protein from Trypanosoma cruzi: Contribution of a beta Hairpin to RNA Binding
    • Volpon L, D'Orso I, Young CR, Frasch AC, Gehring K. NMR Structural Study of TcUBP1, a Single RRM Domain Protein from Trypanosoma cruzi: Contribution of a beta Hairpin to RNA Binding. Biochemistry 2005; 44:3708-17.
    • (2005) Biochemistry , vol.44 , pp. 3708-3717
    • Volpon, L.1    D'Orso, I.2    Young, C.R.3    Frasch, A.C.4    Gehring, K.5


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