메뉴 건너뛰기




Volumn 3, Issue 4, 2015, Pages

Metagenomic assembly and draft genome sequence of an uncharacterized Prevotella sp. from Nelore rumen

Author keywords

[No Author keywords available]

Indexed keywords


EID: 85006757761     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00723-15     Document Type: Article
Times cited : (7)

References (11)
  • 1
    • 78049413631 scopus 로고    scopus 로고
    • Prevotella saccharolytica sp. nov., isolated from the human oral cavity
    • Downes J, Tanner AC, Dewhirst FE, Wade WG. 2010. Prevotella saccharolytica sp. nov., isolated from the human oral cavity. Int J Syst Evol Microbiol 60:2458-2461. http://dx.doi.org/10.1099/ijs.0.014720-0.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 2458-2461
    • Downes, J.1    Tanner, A.C.2    Dewhirst, F.E.3    Wade, W.G.4
  • 3
    • 34548147748 scopus 로고    scopus 로고
    • Prevotella paludivivens sp. nov., a novel strictly anaerobic, Gram-negative, hemicellulosedecomposing bacterium isolated from plant residue and rice roots in irrigated rice-field soil
    • Ueki A, Akasaka H, Satoh A, Suzuki D, Ueki K. 2007. Prevotella paludivivens sp. nov., a novel strictly anaerobic, Gram-negative, hemicellulosedecomposing bacterium isolated from plant residue and rice roots in irrigated rice-field soil. Int J Syst Evol Microbiol 57:1803-1809. http://dx.doi.org/10.1099/ijs.0.64914-0.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1803-1809
    • Ueki, A.1    Akasaka, H.2    Satoh, A.3    Suzuki, D.4    Ueki, K.5
  • 4
    • 0002032609 scopus 로고
    • Bacteroides ruminicola n. sp. and Succinimonas amylolytica; the new genus and species; species of succinic acid-producing anaerobic bacteria of the bovine rumen
    • Bryant MP, Small N, Bouma C, Chu H. 1958. Bacteroides ruminicola n. sp. and Succinimonas amylolytica; the new genus and species; species of succinic acid-producing anaerobic bacteria of the bovine rumen. J Bacteriol 76:15-23.
    • (1958) J Bacteriol , vol.76 , pp. 15-23
    • Bryant, M.P.1    Small, N.2    Bouma, C.3    Chu, H.4
  • 5
    • 0023773371 scopus 로고
    • Esterase activities in Butyriv ibrio fibrisolvens strains
    • Hespell RB, O'Bryan-Shah PJ. 1988. Esterase activities in Butyriv ibrio fibrisolvens strains. Appl Environ Microbiol 54:1917-1922.
    • (1988) Appl Environ Microbiol , vol.54 , pp. 1917-1922
    • Hespell, R.B.1    O'Bryan-Shah, P.J.2
  • 6
    • 78149466996 scopus 로고    scopus 로고
    • Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche
    • Purushe J, Fouts DE, Morrison M, White BA, Mackie RI, North American Consortium for Rumen Bacteria, Coutinho PM, Henrissat B, Nelson KE. 2010. Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche. Microb Ecol 60:721-729. http://dx.doi.org/10.1007/s00248-010-9692-8.
    • (2010) Microb Ecol , vol.60 , pp. 721-729
    • Purushe, J.1    Fouts, D.E.2    Morrison, M.3    White, B.A.4    Mackie, R.I.5    Coutinho, P.M.6    Henrissat, B.7    Nelson, K.E.8
  • 7
    • 84861760530 scopus 로고    scopus 로고
    • IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
    • Peng Y, Leung HC, Yiu SM, Chin FY. 2012. IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28:1420-1428. http://dx.doi.org/10.1093/bioinformatics/bts174.
    • (2012) Bioinformatics , vol.28 , pp. 1420-1428
    • Peng, Y.1    Leung, H.C.2    Yiu, S.M.3    Chin, F.Y.4
  • 8
    • 84925636192 scopus 로고    scopus 로고
    • MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
    • Wu Y.-W, Tang Y.-H, Tringe SG, Simmons BA, Singer SW. 2014. MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm. Microbiome 2:26. http://dx.doi.org/10.1186/2049-2618-2-26.
    • (2014) Microbiome , vol.2 , pp. 26
    • Wu, Y.-W.1    Tang, Y.-H.2    Tringe, S.G.3    Simmons, B.A.4    Singer, S.W.5
  • 11
    • 84864442502 scopus 로고    scopus 로고
    • dbCAN: a Web resource for automated carbohydrate-active enzyme annotation
    • Yin Y, Mao X, Yang J, Chen X, Mao F, Xu Y. 2012. dbCAN: a Web resource for automated carbohydrate-active enzyme annotation. Nucleic Acids Res 40:W445-W451. http://dx.doi.org/10.1093/nar/gks479.
    • (2012) Nucleic Acids Res , vol.40 , pp. W445-W451
    • Yin, Y.1    Mao, X.2    Yang, J.3    Chen, X.4    Mao, F.5    Xu, Y.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.