Complete genome of Bacillus pumilus siphophage Glittering

Genome Announcements

Volumn 1, Issue 6, 2013, Pages

  Matthew, Solomon P ^a   Decker, Skyelar L ^b   Chamakura, Karthik R ^a   Kuty Everett, Gabriel F ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

^b JAMES MADISON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84999788915     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00856-13     Document Type: Article

References (12)

1. Joo GJ, Kim YM, Lee IJ, Song KS, Rhee IK. 2004. Growth promotion of red pepper plug seedlings and the production of gibberellins by Bacillus cereus, Bacillus macroides and Bacillus pumilus. Biotechnol. Lett. 26: 487-491.
2. Yi HS, Yang JW, Ryu CM. 2013. ISR meets SAR outside: additive action of the endophyte Bacillus pumilus INR7 and the chemical inducer, benzothiadiazole, on induced resistance against bacterial spot in field-grown pepper. Front. Plant Sci. 4:122.
3. Islam MR, Jeong YT, Lee YS, Song CH. 2012. Isolation and identification of antifungal compounds from Bacillus subtilis C9 inhibiting the growth of plant pathogenic fungi. Mycobiology 40:59-66.
4. From C, Hormazabal V, Granum PE. 2007. Food poisoning associated with pumilacidin-producing Bacillus pumilus in rice. Int. J. Food Microbiol. 115:319-324.
5. Tena D, Martinez-Torres JA, Perez-Pomata MT, Sáez-Nieto JA, Rubio V, Bisquert J. 2007. Cutaneous infection due to Bacillus pumilus: report of 3 cases. Clin. Infect. Dis. 44:e40-e42. doi:10.1086/511077.
6. Lorenz L, Lins B, Barrett J, Montgomery A, Trapani S, Schindler A, Christie GE, Cresawn SG, Temple L. 2013. Genomic characterization of six novel Bacillus pumilus bacteriophages. Virology 444:374-383.
7. Besemer J, Lomsadze A, Borodovsky M. 2001. GeneMarkS: a selftraining method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions. Nucleic Acids Res. 29:2607-2618.
8. Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL. 2009. BLAST+: architecture and applications. BMC Bioinformatics 10:421. doi:10.1186/1471-2105-10-421.
9. Hunter S, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Das U, Daugherty L, Duquenne L, Finn RD, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Laugraud A, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Mulder N, Natale D, Orengo C, Quinn AF, Selengut JD, Sigrist CJ, Thimma M, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C. 2009. InterPro: the integrative protein signature database. Nucleic Acids Res. 37:D211-D215. doi:10.1093/nar/gkn785.
10. Cornelissen A, Ceyssens PJ, T'Syen J, Van Praet H, Noben JP, Shaburova OV, Krylov VN, Volckaert G, Lavigne R. 2011. The T7-related Pseudomonas putida phage phi15 displays virion-associated biofilm degradation properties. PLoS One 6:e18597. doi:10.1371/journal.pone.00185 97.
11. Graham JE, Sivanathan V, Sherratt DJ, Arciszewska LK. 2010. FtsK translocation on DNA stops at XerCD-dif. Nucleic Acids Res. 38:72-81.
12. Marquis KA, Burton BM, Nollmann M, Ptacin JL, Bustamante C, Ben-Yehuda S, Rudner DZ. 2008. SpoIIIE strips proteins offthe DNA during chromosome translocation. Genes Dev. 22:1786-1795.