-
1
-
-
78149272458
-
Genomic and functional adaptation in surface ocean planktonic prokaryotes
-
Yooseph S, Nealson KH, Rusch DB, McCrow JP, Dupont CL, Kim M, Johnson J, Montgomery R, Ferriera S, Beeson K, Williamson SJ, Tovchigrechko A, Allen AE, Zeigler LA, Sutton G, Eisenstadt E, Rogers YH, Friedman R, Frazier M, Venter JC. 2010. Genomic and functional adaptation in surface ocean planktonic prokaryotes. Nature 468:60-66. http://dx.doi.org/10.1038/nature09530.
-
(2010)
Nature
, vol.468
, pp. 60-66
-
-
Yooseph, S.1
Nealson, K.H.2
Rusch, D.B.3
McCrow, J.P.4
Dupont, C.L.5
Kim, M.6
Johnson, J.7
Montgomery, R.8
Ferriera, S.9
Beeson, K.10
Williamson, S.J.11
Tovchigrechko, A.12
Allen, A.E.13
Zeigler, L.A.14
Sutton, G.15
Eisenstadt, E.16
Rogers, Y.H.17
Friedman, R.18
Frazier, M.19
Venter, J.C.20
more..
-
2
-
-
0004265596
-
-
John Wiley and Sons, New York, NY
-
Ausubel FM, Brent R, Kingston RE, Moore DD, Smith JA, Seidman JG, Struhl K. 1987. Current protocols in molecular biology. John Wiley and Sons, New York, NY.
-
(1987)
Current protocols in molecular biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Smith, J.A.5
Seidman, J.G.6
Struhl, K.7
-
3
-
-
43149115851
-
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829. http://dx.doi.org/10.1101/gr.074492.107.
-
(2008)
Genome Res
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
4
-
-
0034665853
-
Bacterial rhodopsin: evidence for a new type of phototrophy in the sea
-
Béjà O, Aravind L, Koonin EV, Suzuki MT, Hadd A, Nguyen LP, Jovanovich SB, Gates CM, Feldman RA, Spudich JL, Spudich EN, DeLong EF. 2000. Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. Science 289:1902-1906. http://dx.doi.org/10.1126/science.289.5486.1902.
-
(2000)
Science
, vol.289
, pp. 1902-1906
-
-
Béjà, O.1
Aravind, L.2
Koonin, E.V.3
Suzuki, M.T.4
Hadd, A.5
Nguyen, L.P.6
Jovanovich, S.B.7
Gates, C.M.8
Feldman, R.A.9
Spudich, J.L.10
Spudich, E.N.11
DeLong, E.F.12
-
5
-
-
0038391981
-
Diversification and spectral tuning in marine proteorhodopsins
-
Man D, Wang W, Sabehi G, Aravind L, Post AF, Massana R, Spudich EN, Spudich JL, Béjà O. 2003. Diversification and spectral tuning in marine proteorhodopsins. EMBO J. 22:1725-1731. http://dx.doi.org/10.1 093/emboj/cdg183.
-
(2003)
EMBO J
, vol.22
, pp. 1725-1731
-
-
Man, D.1
Wang, W.2
Sabehi, G.3
Aravind, L.4
Post, A.F.5
Massana, R.6
Spudich, E.N.7
Spudich, J.L.8
Béjà, O.9
-
6
-
-
43849084187
-
Proteorhodopsins: an array of physiological roles?
-
Fuhrman JA, Schwalbach MS, Stingl U. 2008. Proteorhodopsins: an array of physiological roles? Nat. Rev. Microbiol. 6:488-494. http://dx.doi.org/10.1038/nrmicro1893.
-
(2008)
Nat. Rev. Microbiol
, vol.6
, pp. 488-494
-
-
Fuhrman, J.A.1
Schwalbach, M.S.2
Stingl, U.3
-
7
-
-
33846238031
-
Light stimulates growth of proteorhodopsin-containing marine Flavobacteria
-
Gómez-Consarnau L, González JM, Coll-Lladó M, Gourdon P, Pascher T, Neutze R, Pedrós-Alió C, Pinhassi J. 2007. Light stimulates growth of proteorhodopsin-containing marine Flavobacteria. Nature 445:210-213. http://dx.doi.org/10.1038/nature05381.
-
(2007)
Nature
, vol.445
, pp. 210-213
-
-
Gómez-Consarnau, L.1
González, J.M.2
Coll-Lladó, M.3
Gourdon, P.4
Pascher, T.5
Neutze, R.6
Pedrós-Alió, C.7
Pinhassi, J.8
-
8
-
-
80052964043
-
Light-induced transcriptional responses associated with proteorhodopsin-enhanced growth in a marine flavobacterium
-
Kimura H, Young CR, Martinez A, DeLong EF. 2011. Light-induced transcriptional responses associated with proteorhodopsin-enhanced growth in a marine flavobacterium. ISME J 5:1641-1651. http://dx.doi.org/10.1038/ismej.2011.36.
-
(2011)
ISME J
, vol.5
, pp. 1641-1651
-
-
Kimura, H.1
Young, C.R.2
Martinez, A.3
DeLong, E.F.4
-
9
-
-
84874611826
-
Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein
-
Riedel T, Gómez-Consarnau L, Tomasch J, Martin M, Jarek M, González JM, Spring S, Rohlfs M, BrinkhoffT, Cypionka H, Göker M, Fiebig A, Klein J, Goesmann A, Fuhrman JA, Wagner-Döbler I. 2013. Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein. PLoS One 8:e57487. http://dx.doi.org/10.1371/journal.pone.0057487.
-
(2013)
PLoS One
, vol.8
-
-
Riedel, T.1
Gómez-Consarnau, L.2
Tomasch, J.3
Martin, M.4
Jarek, M.5
González, J.M.6
Spring, S.7
Rohlfs, M.8
Brinkhoff, T.9
Cypionka, H.10
Göker, M.11
Fiebig, A.12
Klein, J.13
Goesmann, A.14
Fuhrman, J.A.15
Wagner-Döbler, I.16
-
10
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410. http://dx.doi.org/10.10 16/S0022-2836(05)80360-2.
-
(1990)
J. Mol. Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
11
-
-
34247488726
-
The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin
-
Stingl U, Desiderio RA, Cho JC, Vergin KL, Giovannoni SJ. 2007. The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin. Appl. Environ. Microbiol. 73:2290-2296. http://dx.doi.org/10.1128/AEM.02559-06.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 2290-2296
-
-
Stingl, U.1
Desiderio, R.A.2
Cho, J.C.3
Vergin, K.L.4
Giovannoni, S.J.5
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