Complete genome sequence of Mycobacterium massiliense clinical strain Asan 50594, belonging to the type II genotype

Genome Announcements

Volumn 1, Issue 4, 2013, Pages

  Kim, Byoung Jun ^a   Kim, Bo Ram ^a   Hong, Seok Hyun ^a   Seok, Seung Hyeok ^a   Kook, Yoon Hoh ^a   Kim, Bum Joon ^a  

^a Seoul National University College of Medicine   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84997701158     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00429-13     Document Type: Article

References (13)

1. Petrini B. 2006. Mycobacterium abscessus: an emerging rapid-growing potential pathogen. APMIS 114:319-328.
2. Choi G-E, Jo Y, Shin SJ. 2012. Current understanding of Mycobacterium abscessus infection. J. Bacteriol. Virol. 42:17-28.
3. Koh WJ, Kwon OJ, Jeon K, Kim TS, Lee KS, Park YK, Bai GH. 2006. Clinical significance of nontuberculous mycobacteria isolated from respiratory specimens in Korea. Chest 129:341-348.
4. Adekambi T, Berger P, Raoult D, Drancourt M. 2006. rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov. Int. J. Syst. Evol. Microbiol. 56:133-143.
5. Adékambi T, Reynaud-Gaubert M, Greub G, Gevaudan MJ, La Scola B, Raoult D, Drancourt M. 2004. Amoebal coculture of "Mycobacterium massiliense" sp. nov. from the sputum of a patient with hemoptoic pneumonia. J. Clin. Microbiol. 42:5493-5501.
6. Kim HY, Yun YJ, Park CG, Lee DH, Cho YK, Park BJ, Joo SI, Kim EC, Hur YJ, Kim BJ, Kook YH. 2007. Outbreak of Mycobacterium massiliense infection associated with intramuscular injections. J. Clin. Microbiol. 45:3127-3130.
7. Kim HS, Lee KS, Koh WJ, Jeon K, Lee EJ, Kang H, Ahn J. 2012. Serial CT findings of Mycobacterium massiliense pulmonary disease compared with Mycobacterium abscessus disease after treatment with antibiotic therapy. Radiology 263:260-270.
8. Mitra S, Tapadar SR, Banerjee D, Bhattacharjee S, Dey S, Kundu S. 2012. Pulmonary disease due to Mycobacterium massiliense. Indian J. Chest Dis. Allied Sci. 54:53-57.
9. Kim BJ, Yi SY, Shim TS, Do SY, Yu HK, Park YG, Kook YH, Kim BJ. 2012. Discovery of a novel hsp65 genotype within Mycobacterium massiliense associated with the rough colony morphology. PLoS One 7:e38420. doi:10.1371/journal.pone.0038420.
10. Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. 2008. TheRASTserver: rapid annotations using subsystems technology.BMC Genomics 9:75. doi:10.1186/1471-2164-9-75.
11. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
12. Lagesen K, Hallin P, Rodland EA, Staerfeldt HH, Rognes T, Ussery DW. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
13. Carver T, Berriman M, Tivey A, Patel C, Bohme U, Barrell BG, Parkhill J, Rajandream MA. 2008. Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. Bioinformatics 24: 2672-2676.