Draft genome sequence of Haemophilus parasuis gx033, a serotype 4 strain isolated from the swine lower respiratory tract

Genome Announcements

Volumn 1, Issue 3, 2013, Pages

  Li, Jun ^a,b   Peng, Hao ^a,b,c   Xu, Li Gan ^a,b   Xie, Yu Zhou ^a,b   Xuan, Xiong Biao ^a,b   Ma, Chun Xia ^a,b   Hu, Shuai ^a,b   Chen, Ze Xiang ^a,b   Yang, Wei ^a,b   Xie, Yong Ping ^a,b   Pan, Yan ^a,b   Tao, Li ^a,b  

^a Guangxi Veterinary Research Institute   (China)

^b Guangxi Key Laboratory of Animal Vaccines and Diagnostics   (China)

^c GUANGXI UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84997674080     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00224-13     Document Type: Article

References (14)

1. Oliveira S, Pijoan C. 2004. Haemophilus parasuis: new trends in diagnosis, epidemiology and control. Vet. Microbiol. 68:71-75.
2. Vanier G, Szczotka A, Friedl P, Lacouture S, Jacques M, Gottschalk M. 2006. Haemophilus parasuis invades porcine brain microvascular endothelial cells. Microbiology 152:135-142.
3. Tadjine M, Mittal KR, Bourdon S, Gottschalk M. 2004. Development of a new serological test for serotyping Haemophilus parasuis isolates and determination of their prevalence in North America. J. Clin. Microbiol. 42:839-840.
4. Cai X, Chen H, Blackall PJ, Yin Z, Wang L, Liu Z, Jin M. 2005. Serological characterization of Haemophilus parasuis isolates from China. Vet. Microbiol. 111:231-236.
5. Bentley DR, Balasubramanian S, Swerdlow HP, Smith GP, Milton J, Brown CG, Hall KP, Evers DJ, Barnes CL, Bignell HR, Boutell JM, Bryant J, Carter RJ, Keira Cheetham R, Cox AJ, Ellis DJ, Flatbush MR, Gormley NA, Humphray SJ, Irving LJ, Karbelashvili MS, Kirk SM, Li H, Liu X, Maisinger KS, Murray LJ, Obradovic B, Ost T, Parkinson ML, Pratt MR, Rasolonjatovo IM, Reed MT, Rigatti R, Rodighiero C, Ross MT, Sabot A, Sankar SV, Scally A, Schroth GP, Smith ME, Smith VP, Spiridou A, Torrance PE, Tzonev SS, Vermaas EH, Walter K, Wu X, Zhang L, Alam MD, Anastasi C, et al. 2008. Accurate whole human genome sequencing using reversible terminator chemistry. Nature 456: 53-59.
6. Ding R, Li Y, Qian C, Wu X. 2011. Draft genome sequence of Paenibacillus elgii B69, a strain with broad antimicrobial activity. J. Bacteriol. 193:4537.
7. Li R, Zhu H, Ruan J, Qian W, Fang X, Shi Z, Li Y, Li S, Shan G, Kristiansen K, Li S, Yang H, Wang J, Wang J. 2010. De novo assembly of human genomes with massively parallel short read sequencing. Genome Res. 20:265-272.
8. Delcher AL, Bratke KA, Powers EC, Salzberg SL. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
9. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
10. Lagesen K, Hallin P, Rødland EA, Staerfeldt HH, Rognes T, Ussery DW. 2007. RNammer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
11. Tatusov RL, Galperin MY, Natale DA, Koonin EV. 2000. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 28:33-36.
12. Kanehisa M, Goto S, Kawashima S, Okuno Y, Hattori M. 2004. The KEGG resource for deciphering the genome. Nucleic Acids Res. 32: D277-D280.
13. Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL. 2008. GenBank. Nucleic Acids Res. 36:D25-D30.
14. Watson AA, Alm RA, Mattick JS. 1996. Identification of a gene, pilF, required for type 4 fimbrial biogenesis and twitching motility in Pseudomonas aeruginosa. Gene 180:49-56.