Complete genome sequence of Mannheimia haemolytica strain 42548 from a case of bovine respiratory disease

Genome Announcements

Volumn 1, Issue 3, 2013, Pages

  Eidam, Christopher ^a   Poehlein, Anja ^b   Michael, Geovana Brenner ^a   Kadlec, Kristina ^a   Liesegang, Heiko ^b   Brzuszkiewicz, Elzbieta ^b   Daniel, Rolf ^b   Sweeney, Michael T ^c   Murray, Robert W ^c   Watts, Jeffrey L ^c   Schwarz, Stefan ^a  

^a FEDERAL RESEARCH INSTITUTE FOR ANIMAL HEALTH   (Germany)

^b UNIVERSITY OF GÖTTINGEN   (Germany)

^c ZOETIS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84997610834     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00318-13     Document Type: Article

References (15)

1. Griffin D. 1997. Economic impact associated with respiratory disease in beef cattle. Vet. Clin. North Am. Food Anim. Pract. 13:367-377.
2. Edwards TA. 2010. Control methods for bovine respiratory disease for feedlot cattle. Vet. Clin. North Am. Food Anim. Pract. 26:273-284.
3. Watts JL, Sweeney MT. 2010. Antimicrobial resistance in bovine respiratory disease pathogens: measures, trends, and impact on efficacy. Vet. Clin. North Am. Food Anim. Pract. 26:79-88.
4. Michael GB, Kadlec K, Sweeney MT, Brzuszkiewicz E, Liesegang H, Daniel R, Murray RW, Watts JL, Schwarz S. 2012. ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: analysis of the regions that comprise 12 antimicrobial resistance genes. J. Antimicrob. Chemother. 67:84-90.
5. Michael GB, Kadlec K, Sweeney MT, Brzuszkiewicz E, Liesegang H, Daniel R, Murray RW, Watts JL, Schwarz S. 2012. ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: structure and transfer. J. Antimicrob. Chemother. 67:91-100.
6. Michael GB, Eidam C, Kadlec K, Meyer K, Sweeney MT, Murray RW, Watts JL, Schwarz S. 2012. Increased MICs of gamithromycin and tildipirosin in the presence of the genes erm(42) and msr(E)-mph(E) for bovine Pasteurella multocida and Mannheimia haemolytica. J. Antimicrob. Chemother. 67:1555-1557.
7. Sanger F, Nicklen S, Coulson AR. 1992. DNA sequencing with chainterminating inhibitors. 1977. Biotechnol. 24:104-108.
8. Staden R, Beal KF, Bonfield JK. 2000. The Staden package, 1998. Methods Mol. Biol. 132:115-130.
9. Tech M, Merkl R. 2003. YACOP: enhanced gene prediction obtained by a combination of existing methods. In Silico Biol. 3:441-451.
10. Aggarwal G, Ramaswamy R. 2002. Ab initio gene identification: prokaryote genome annotation with GeneScan and GLIMMER. J. Biosci. 27: 7-14.
11. Lagesen K, Hallin P, Rødland EA, Staerfeldt HH, Rognes T, Ussery DW. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
12. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
13. Zdobnov EM, Apweiler R. 2001. InterProScan-an integration platform for the signature-recognition methods in interpro. Bioinformatics 17: 847-848.
14. Markowitz VM, Mavromatis K, Ivanova NN, Chen IM, Chu K, Kyrpides NC. 2009. IMG er: a system for microbial genome annotation expert review and curation. Bioinformatics 25:2271-2278.
15. Makarova KS, Haft DH, Barrangou R, Brouns SJJ, Charpentier E, Horvath P, Moineau S, Mojica FJM, Wolf YI, Yakunin AF, van der Oost J, Koonin EV. 2011. Evolution and classification of the CRISPR-Cas systems. Nat. Rev. Microbiol. 9:467-477.