Draft genome sequence of Bacillus atrophaeus UCMB-5137, a plant growth-promoting rhizobacterium

Genome Announcements

Volumn 1, Issue 3, 2013, Pages

  Chan, Wai Yin ^a   Dietel, Kristin ^b   Lapa, Svitlana V ^c   Avdeeva, Lilija V ^c   Borriss, Rainer ^b   Reva, Oleg N ^a  

^a UNIVERSITY OF PRETORIA   (South Africa)

^b ABiTEP   (Germany)

^c ZABOLOTNY INSTITUTE OF MICROBIOLOGY AND VIROLOGY   (Ukraine)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84997107096     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00233-13     Document Type: Article

References (10)

1. Borriss R. 2011. Use of plant-associated Bacillus strains as biofertilizers and biocontrol agents, p 41-76. In Maheshwari DK (ed), Bacteria in agrobiology: plant growth responses. Springer Verlag, Heidelberg, Germany.
2. Borriss R, Chen XH, Rueckert C, Blom J, Becker A, Baumgarth B, Fan B, Pukall R, Schumann P, Spröer C, Junge H, Vater J, Pühler A, Klenk HP. 2011. Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons. Int. J. Syst. Evol. Microbiol. 61:1786-1801.
3. Reva ON, Dixelius C, Meijer J, Priest FG. 2004. Taxonomic characterization and plant colonizing abilities of some bacteria related to Bacillus amyloliquefaciens and Bacillus subtilis. FEMS Microbiol. Ecol. 48: 249-259.
4. Safronova LA, Zelena LB, Klochko VV, Reva ON. 2012. Does the applicability of Bacillus strains in probiotics rely upon their taxonomy? Can. J. Microbiol. 58:212-219.
5. Lapa SV, Reva OM. 2005. Some properties of Bacillus subtilis strains active against rotting agents on strawberries and fruit. Mikrobiol. Z. 67:22-31.
6. Husemann P, Stoye J. 2010. r2cat: synteny plots and comparative assembly. Bioinformatics 26:570-571.
7. Lukashin AV, Borodovsky M. 1998. GeneMark.hmm: new solutions for gene finding. Nucleic Acids Res. 26:1107-1115.
8. Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
9. Gillespie JJ, Wattam AR, Cammer SA, Gabbard JL, Shukla MP, Dalay O, Driscoll T, Hix D, Mane SP, Mao C, Nordberg EK, Scott M, Schulman JR, Snyder EE, Sullivan DE, Wang C, Warren A, Williams KP, Xue T, Yoo HS, Zhang C, Zhang Y, Will R, Kenyon RW, Sobral BW. 2011. PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species. Infect. Immun. 79:4286-4298.
10. Buist G, Steen A, Kok J, Kuipers OP. 2008. LysM, a widely distributed protein motif for binding to (peptido)glycans. Mol. Microbiol. 68: 838-847.