Draft genome sequence of Meiothermus ruber H328, which degrades chicken feathers, and identification of proteases and peptidases responsible for degradation

Genome Announcements

Volumn 1, Issue 3, 2013, Pages

  Inada, Shuhei ^a   Watanabe, Kunihiko ^a  

^a KYOTO PREFECTURAL UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84997079756     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00176-13     Document Type: Article

References (7)

1. Loginova LG, Egorova LA, Golovacheva RS, Seregina LM. 1984. Thermus ruber sp. nov., nom. rev. Int. J. Syst. Bacteriol. 34:498-499.
2. Nobre MF, Trüper HG, da Costa MS. 1996. Transfer of Thermus ruber (Loginova et al. 1984), Thermus silvanus (Tenreiro et al. 1995), and Thermus chliarophilus (Tenreiro et al. 1995) to Meiothermus gen. nov. as Meiothermus ruber comb. nov., Meiothermus silvanus comb. nov., and Meiothermus chliarophilus comb. nov., respectively, and emendation of the genus Thermus. Int. J. Syst. Bacteriol. 46:604-606.
3. Matsui T, Yamada Y, Mitsuya H, Shigeri Y, Yoshida Y, Saito Y, Matsui H, Watanabe K. 2009. Sustainable and practical degradation of intact chicken feathers by cultivating a newly isolated thermophilic Meiothermus ruber H328. Appl. Microbiol. Biotechnol. 82:941-950.
4. Shigeri Y, Matsui T, Watanabe K. 2009. Decomposition of intact chicken feathers by a thermophile in combination with an acidulocomposting garbage-treatment process. Biosci. Biotechnol. Biochem. 73:2519-2521.
5. Meade HM, Long SR, Ruvkun GB, Brown SE, Ausubel FM. 1982. Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis. J. Bacteriol. 149:114-122.
6. Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
7. Tindall BJ, Sikorski J, Lucas S, Goltsman E, Copeland A, Del Rio TG, Nolan M, Tice H, Cheng JF, Han C, Pitluck S, Liolios C, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Fähnrich R, Goodwin L, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A. 2010. Complete genome sequence of Meiothermus ruber type strain (21T). Stand. Genomic Sci. 3:26-36.