SAMSA: A comprehensive metatranscriptome analysis pipeline

BMC Bioinformatics

Volumn 17, Issue 1, 2016, Pages

  Westreich, Samuel T ^a   Korf, Ian ^a   Mills, David A ^a   Lemay, Danielle G ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Best practices; Big data; Metagenome; Metatranscriptome; Microbiome; Pipeline; RNA seq; Software package

Indexed keywords

BIOINFORMATICS; BIOLOGY; CLUSTER COMPUTING; FUNCTION EVALUATION; NUCLEIC ACIDS; OPEN SOURCE SOFTWARE; PIPELINES; POPULATION STATISTICS; RNA; SOFTWARE PACKAGES;

BEST PRACTICES; EXPERIMENTAL REQUIREMENTS; METAGENOMES; METATRANSCRIPTOME; MICROBIAL COMMUNITIES; MICROBIOME; TRANSCRIPTION ACTIVITY; TRANSCRIPTIONAL ACTIVITY;

BIG DATA;

EID: 84996555359     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/s12859-016-1270-8     Document Type: Article

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