Draft genome sequence of Pseudomonas aeruginosa strain N002, isolated from crude oilcontaminated soil from Geleky, Assam, India

Genome Announcements

Volumn 1, Issue 1, 2013, Pages

  Roy, Abhjit Sarma ^a   Baruah, Reshita ^a   Gogoi, Dhrubajyoti ^a   Borah, Maina ^a   Singh, Anil Kumar ^a   Boruah, Hari Prasanna Deka ^a  

^a CSIR NORTH EAST INSTITUTE OF SCIENCE AND TECHNOLOGY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84995958678     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00104-12     Document Type: Article

References (21)

1. Al-Sarawi M, Massoud M. 1998. Preliminary assessment of oil contamination levels in soils contaminated with oil lakes in the greater Burgan oil fields, Kuwait. Water Air Soil Pollut. 106:493-504.
2. Al-Hashem MA, Brain PF, Omar SA. 2007. Effects of oil pollution at Kuwait's greater Al-Burgan oil field on polycyclic aromatic hydrocarbon concentrations in the tissues of the desert lizard Acanthodactylus scutellatus and their ant prey. Ecotoxicology 16:551-555.
3. ud Din S, Al Dousari A, Literathy P. 2008. Evidence of hydrocarbon contamination from the Burgan oil field, Kuwait: interpretations from thermal remote sensing data. J. Environ. Manage. 86:605-615.
4. Gogoi B, Dutta N, Goswami P, Mohan T. 2003. A case study of bioremediation of petroleum-hydrocarbon contaminated soil at a crude oil spill site. Adv. Environ. Res. 7:767-782.
5. Abdol Hamid H, Kassim WM, El Hishir A, El-Jawashi SA. 2008. Risk assessment and remediation suggestion of impacted soil by produced water associated with oil production. Environ. Monit. Assess. 145:95-102.
6. Xiong ZT, Hu HX, Wang YX, Fu GH, Tan ZQ, Yan GA. 1997. Comparative analyses of soil contaminant levels and plant species diversity at developing and disused oil well sites in Qianjiang oilfield, China. Bull. Environ. Contam. Toxicol. 58:667-672.
7. Liang Y, Li G, Van Nostrand JD, He Z, Wu L, Deng Y, Zhang X, Zhou J. 2009. Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field. FEMS Microbiol. Ecol. 70:324-333.
8. Lundegard P, Johnson P. 2006. Source zone natural attenuation at petroleum hydrocarbon spill sites-II: application to a former oil field. Ground Water Monit. R. 26:93-106.
9. Allen JP, Atekwana EA, Atekwana EA, Duris JW, Werkema DD, Rossbach S. 2007. The microbial community structure in petroleumcontaminated sediments corresponds to geophysical signatures. Appl. Environ. Microbiol. 73:2860-2870.
10. Paissé S, Coulon F, Goñi-Urriza M, Peperzak L, McGenity TJ, Duran R. 2008. Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment. FEMS Microbiol. Ecol. 66:295-305.
11. Frick CM, Farrell RE, Germida JJ. 1999. Assessment of phytoremediation as an in-situ technique for cleaning oil-contaminated sites. Petroleum Technology Alliance Canada, Calgary, Canada.
12. Das K, Mukherjee AK. 2005. Characterization of biochemical properties and biological activities of biosurfactants produced by Pseudomonas aeruginosa mucoid and non-mucoid strains isolated from hydrocarboncontaminated soil samples. Appl. Microbiol. Biotechnol. 69:192-199.
13. Silva RMP, Rodriguez AA, Montes de Oca JMG, Moreno DC. 2006. Biodegradation of crude oil by Pseudomonas aeruginosa AT18 strain. Technología Química 1:70-77.
14. Solanas AM, Parés R, Bayona JM, Albaigés J. 1984. Degradation of aromatic petroleum hydrocarbons by pure microbial cultures. Chemosphere 13:593-601.
15. Palittapongarnpim M, Pokethitiyook P, Upatham ES, Tangbanluekal L. 1998. Biodegradation of crude oil by soil microorganisms in the tropic. Biodegradation 9:83-90.
16. Viñas V, Grifoll M, Solanas SJ. 2002. Biodegradation of a crude oil by three microbial consortia of different origins and metabolic capabilities. J. Ind. Microbiol. Biotechnol. 28:252-260.
17. Gunn A, Braathen K, Børresen M, Engene B, Kolstad P. 2003. In situ biodegradation of petroleum hydrocarbons in frozen Arctic soils. Cold Regions Sci. Technol. 37:97-120.
18. Delcher AL, Harmon D, Kasif S, White O, Salzberg SL. 1999. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 27: 4636-4641.
19. Schattner P, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33:686-689.
20. Lagesen K, Hallin P, Rødland EA, Stærfeldt H-H, Rognes T, Ussery DW. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
21. Borodovsky M, McIninch J. 1993. GeneMark: parallel gene recognition for both DNA strands. Comput. Chem. 17:123-133.