메뉴 건너뛰기




Volumn 6, Issue , 2016, Pages

Ecological dynamics of influenza A viruses: Cross-species transmission and global migration

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ANIMAL; BIRD; CLASSIFICATION; GENETICS; HOST RANGE; INFLUENZA A VIRUS; MOLECULAR EVOLUTION; PHYLOGENY; PHYLOGEOGRAPHY; PHYSIOLOGY; PIG; POPULATION MIGRATION; VIROLOGY;

EID: 84995532080     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep36839     Document Type: Article
Times cited : (26)

References (38)
  • 1
    • 77956499048 scopus 로고    scopus 로고
    • Influenza virus evolution, host adaptation, and pandemic formation
    • Taubenberger, J. K. & Kash, J. C. Influenza virus evolution, host adaptation, and pandemic formation. Cell Host & Microbe 7, 440-451 (2010).
    • (2010) Cell Host & Microbe , vol.7 , pp. 440-451
    • Taubenberger, J.K.1    Kash, J.C.2
  • 3
    • 77953031228 scopus 로고    scopus 로고
    • 1918 Influenza: The mother of all pandemics
    • Taubenberger, J. K. & Morens, D. M. 1918 Influenza: The mother of all pandemics. Rev Biomed 17, 69-79 (2006).
    • (2006) Rev Biomed , vol.17 , pp. 69-79
    • Taubenberger, J.K.1    Morens, D.M.2
  • 4
    • 3142579867 scopus 로고    scopus 로고
    • Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia
    • Li, K. et al. Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia. Nature 430, 209-213 (2004).
    • (2004) Nature , vol.430 , pp. 209-213
    • Li, K.1
  • 5
    • 84877785371 scopus 로고    scopus 로고
    • Human infection with a novel avian-origin influenza A (H7N9) virus
    • Gao, R. et al. Human infection with a novel avian-origin influenza A (H7N9) virus. New England Journal of Medicine 368, 1888-1897 (2013).
    • (2013) New England Journal of Medicine , vol.368 , pp. 1888-1897
    • Gao, R.1
  • 6
    • 33645986456 scopus 로고    scopus 로고
    • Host species barriers to influenza virus infections
    • Kuiken, T. et al. Host Species Barriers to Influenza Virus Infections. Science 312, 394-397 (2006).
    • (2006) Science , vol.312 , pp. 394-397
    • Kuiken, T.1
  • 8
    • 84888865092 scopus 로고    scopus 로고
    • Human infection with avian influenza A H6N1 virus: An epidemiological analysis
    • Wei, S.-H. et al. Human infection with avian influenza A H6N1 virus: An epidemiological analysis. The lancet Respiratory medicine 1, 771-778 (2013).
    • (2013) The Lancet Respiratory Medicine , vol.1 , pp. 771-778
    • Wei, S.-H.1
  • 9
    • 84905269053 scopus 로고    scopus 로고
    • Global and local persistence of influenza A (H5N1) virus
    • Li, X. et al. Global and local persistence of influenza A (H5N1) virus. Emerg Infect Dis 20, 1287-1295 (2014).
    • (2014) Emerg Infect Dis , vol.20 , pp. 1287-1295
    • Li, X.1
  • 10
    • 67449089781 scopus 로고    scopus 로고
    • Past, present, and possible future human infection with influenza virus A subtype H7
    • Belser, J. A., Bridges, C. B., Katz, J. M. & Tumpey, T. M. Past, present, and possible future human infection with influenza virus A subtype H7. Emerg Infect Dis 15, 859-65 (2009).
    • (2009) Emerg Infect Dis , vol.15 , pp. 859-865
    • Belser, J.A.1    Bridges, C.B.2    Katz, J.M.3    Tumpey, T.M.4
  • 11
    • 0033546991 scopus 로고    scopus 로고
    • Human infection with influenza H9N2
    • Peiris, M. et al. Human infection with influenza H9N2. The Lancet 354, 916-917 (1999).
    • (1999) The Lancet , vol.354 , pp. 916-917
    • Peiris, M.1
  • 12
    • 84894063527 scopus 로고    scopus 로고
    • Clinical and epidemiological characteristics of a fatal case of avian influenza A H10N8 virus infection: A descriptive study
    • Chen, H. et al. Clinical and epidemiological characteristics of a fatal case of avian influenza A H10N8 virus infection: A descriptive study. The Lancet 383, 714-721 (2014).
    • (2014) The Lancet , vol.383 , pp. 714-721
    • Chen, H.1
  • 13
    • 84936938128 scopus 로고    scopus 로고
    • Global circulation patterns of seasonal influenza viruses vary with antigenic drift
    • Bedford, T. et al. Global circulation patterns of seasonal influenza viruses vary with antigenic drift. Nature 523, 217-220 (2015).
    • (2015) Nature , vol.523 , pp. 217-220
    • Bedford, T.1
  • 14
    • 42349094829 scopus 로고    scopus 로고
    • The global circulation of seasonal influenza A (H3N2) viruses
    • Russell, C. A. et al. The global circulation of seasonal influenza A (H3N2) viruses. Science 320, 340-346 (2008).
    • (2008) Science , vol.320 , pp. 340-346
    • Russell, C.A.1
  • 15
    • 77954076631 scopus 로고    scopus 로고
    • Global migration dynamics underlie evolution and persistence of human influenza A (H3N2)
    • Bedford, T., Cobey, S., Beerli, P. & Pascual, M. Global migration dynamics underlie evolution and persistence of human influenza A (H3N2). Plos Pathog 6, e1000918 (2010).
    • (2010) Plos Pathog , vol.6 , pp. e1000918
    • Bedford, T.1    Cobey, S.2    Beerli, P.3    Pascual, M.4
  • 16
    • 84895733259 scopus 로고    scopus 로고
    • Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza h3n2
    • Lemey, P. et al. Unifying Viral Genetics and Human Transportation Data to Predict the Global Transmission Dynamics of Human Influenza H3N2. Plos Pathog 10, e1003932 (2014).
    • (2014) Plos Pathog , vol.10 , pp. e1003932
    • Lemey, P.1
  • 17
    • 44449164435 scopus 로고    scopus 로고
    • The genomic and epidemiological dynamics of human influenza A virus
    • Rambaut, A. et al. The genomic and epidemiological dynamics of human influenza A virus. Nature 453, 615-619 (2008).
    • (2008) Nature , vol.453 , pp. 615-619
    • Rambaut, A.1
  • 18
    • 84929698840 scopus 로고    scopus 로고
    • Phylogeography of Avian influenza A H9N2 in China
    • Jin, Y. et al. Phylogeography of Avian influenza A H9N2 in China. BMC Genomics 15, 1 (2014).
    • (2014) BMC Genomics , vol.15 , pp. 1
    • Jin, Y.1
  • 19
    • 84911455217 scopus 로고    scopus 로고
    • Enabling the'host jump': Structural determinants of receptor-binding specificity in influenza A viruses
    • Shi, Y., Wu, Y., Zhang, W., Qi, J. & Gao, G. F. Enabling the'host jump': structural determinants of receptor-binding specificity in influenza A viruses. Nature Reviews Microbiology 12, 822-831 (2014).
    • (2014) Nature Reviews Microbiology , vol.12 , pp. 822-831
    • Shi, Y.1    Wu, Y.2    Zhang, W.3    Qi, J.4    Gao, G.F.5
  • 20
    • 34249726105 scopus 로고    scopus 로고
    • Spatial, temporal, and species variation in prevalence of influenza A viruses in wild migratory birds
    • Munster, V. J. et al. Spatial, temporal, and species variation in prevalence of influenza A viruses in wild migratory birds. Plos Pathog 3, e61 (2007).
    • (2007) Plos Pathog , vol.3 , pp. e61
    • Munster, V.J.1
  • 21
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond, A. J. & Rambaut, A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7, 214 (2007).
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 22
    • 85004008376 scopus 로고    scopus 로고
    • Whole-genome sequence of a reassortant H5N6 avian influenza virus isolated from a live poultry market in China, 2013
    • Qi, X., Cui, L., Yu, H., Ge, Y. & Tang, F. Whole-genome sequence of a reassortant H5N6 avian influenza virus isolated from a live poultry market in China, 2013. Genome announcements 2, e00706-00714 (2014).
    • (2014) Genome Announcements , vol.2 , pp. e00706-00714
    • Qi, X.1    Cui, L.2    Yu, H.3    Ge, Y.4    Tang, F.5
  • 23
    • 0033529904 scopus 로고    scopus 로고
    • Molecular characterization of H9N2 influenza viruses: Were they the donors of the "internal" genes of H5N1 viruses in Hong Kong
    • Guan, Y., Shortridge, K. F., Krauss, S. & Webster, R. G. Molecular characterization of H9N2 influenza viruses: were they the donors of the "internal" genes of H5N1 viruses in Hong Kong? Proceedings of the National Academy of Sciences 96, 9363-9367 (1999).
    • (1999) Proceedings of the National Academy of Sciences , vol.96 , pp. 9363-9367
    • Guan, Y.1    Shortridge, K.F.2    Krauss, S.3    Webster, R.G.4
  • 24
    • 84895749932 scopus 로고    scopus 로고
    • Poultry carrying H9N2 act as incubators for novel human avian influenza viruses
    • Liu, D., Shi, W. & Gao, G. F. Poultry carrying H9N2 act as incubators for novel human avian influenza viruses. The Lancet 383, 869 (2014).
    • (2014) The Lancet , vol.383 , pp. 869
    • Liu, D.1    Shi, W.2    Gao, G.F.3
  • 25
    • 84920997073 scopus 로고    scopus 로고
    • Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus
    • Pu, J. et al. Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus. Proceedings of the National Academy of Sciences 112, 548-553 (2015).
    • (2015) Proceedings of the National Academy of Sciences , vol.112 , pp. 548-553
    • Pu, J.1
  • 26
    • 84893142866 scopus 로고    scopus 로고
    • Dynamic reassortments and genetic heterogeneity of the human-infecting influenza A (H7N9) virus
    • Cui, L. et al. Dynamic reassortments and genetic heterogeneity of the human-infecting influenza A (H7N9) virus. Nature communications 5, 3142-3142 (2014).
    • (2014) Nature Communications , vol.5 , pp. 3142
    • Cui, L.1
  • 27
    • 0034815075 scopus 로고    scopus 로고
    • Cocirculation of avian H9N2 and contemporary "human" H3N2 influenza A viruses in pigs in southeastern China: Potential for genetic reassortment
    • Peiris, J. et al. Cocirculation of avian H9N2 and contemporary "human" H3N2 influenza A viruses in pigs in southeastern China: potential for genetic reassortment? Journal of Virology 75, 9679-9686 (2001).
    • (2001) Journal of Virology , vol.75 , pp. 9679-9686
    • Peiris, J.1
  • 28
    • 84925637665 scopus 로고    scopus 로고
    • Global migration of influenza A viruses in swine
    • Nelson, M. I. et al. Global migration of influenza A viruses in swine. Nature communications 6 (2015).
    • (2015) Nature Communications , vol.6
    • Nelson, M.I.1
  • 29
    • 38349184863 scopus 로고    scopus 로고
    • Genetic analysis of four porcine avian influenza viruses isolated from Shandong, China
    • Shi, W. et al. Genetic analysis of four porcine avian influenza viruses isolated from Shandong, China. Archives of virology 153, 211-217 (2008).
    • (2008) Archives of Virology , vol.153 , pp. 211-217
    • Shi, W.1
  • 30
    • 24944577427 scopus 로고    scopus 로고
    • Birds, migration and emerging zoonoses: West Nile virus, Lyme disease, influenza A and enteropathogens
    • Reed, K. D., Meece, J. K., Henkel, J. S. & Shukla, S. K. Birds, migration and emerging zoonoses: West Nile virus, Lyme disease, influenza A and enteropathogens. Clinical medicine & research 1, 5-12 (2003).
    • (2003) Clinical Medicine & Research , vol.1 , pp. 5-12
    • Reed, K.D.1    Meece, J.K.2    Henkel, J.S.3    Shukla, S.K.4
  • 31
    • 33646033777 scopus 로고    scopus 로고
    • Global patterns of influenza A virus in wild birds
    • Olsen, B. et al. Global patterns of influenza A virus in wild birds. Science 312, 384-388 (2006).
    • (2006) Science , vol.312 , pp. 384-388
    • Olsen, B.1
  • 32
    • 82455208934 scopus 로고    scopus 로고
    • Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds
    • Lam, T. T. et al. Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds. Ecology letters 15, 24-33 (2012).
    • (2012) Ecology Letters , vol.15 , pp. 24-33
    • Lam, T.T.1
  • 33
    • 84920375388 scopus 로고    scopus 로고
    • Avian influenza H5N1 viral and bird migration networks in Asia
    • Tian, H. et al. Avian influenza H5N1 viral and bird migration networks in Asia. Proceedings of the National Academy of Sciences 112, 172-177 (2015).
    • (2015) Proceedings of the National Academy of Sciences , vol.112 , pp. 172-177
    • Tian, H.1
  • 34
    • 67650407532 scopus 로고    scopus 로고
    • Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans
    • Garten, R. J. et al. Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science 325, 197-201 (2009).
    • (2009) Science , vol.325 , pp. 197-201
    • Garten, R.J.1
  • 35
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
    • Katoh, K. & Standley, D. M. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30, 772-780 (2013).
    • (2013) Molecular Biology and Evolution , vol.30 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 36
    • 84995383832 scopus 로고    scopus 로고
    • CMS Family Portal. (08/07/2016)
    • CMS Family Portal. http://www. migratoryspecies. org/ (08/07/2016) (2016).
    • (2016)
  • 37
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2-approximately maximum-likelihood trees for large alignments
    • Price, M. N., Dehal, P. S. & Arkin, A. P. FastTree 2-approximately maximum-likelihood trees for large alignments. Plos One 5, e9490 (2010).
    • (2010) Plos One , vol.5 , pp. e9490
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 38
    • 80053959139 scopus 로고    scopus 로고
    • SPREAD: Spatial phylogenetic reconstruction of evolutionary dynamics
    • Bielejec, F., Rambaut, A., Suchard, M. A. & Lemey, P. SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics. Bioinformatics 27, 2910-2912 (2011).
    • (2011) Bioinformatics , vol.27 , pp. 2910-2912
    • Bielejec, F.1    Rambaut, A.2    Suchard, M.A.3    Lemey, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.