Single stranded DNA translocation through a nanopore: A master equation approach

Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics

Volumn 68, Issue 4, 2003, Pages

  Flomenbom, O ^a   Klafter, J ^a  

^a TEL AVIV UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

CELL MEMBRANES; ELECTRIC POTENTIAL; GENES; MATHEMATICAL MODELS; MATRIX ALGEBRA; POROSITY; PROBABILITY DENSITY FUNCTION; STIFFNESS; THERMAL EFFECTS;

MEMBRANE CHANNELS; TRANSLOCATION;

DNA;

DNA;

ACTIVE TRANSPORT; BIOLOGICAL MODEL; CELL MEMBRANE; CELL MEMBRANE PERMEABILITY; CHEMICAL MODEL; CHEMISTRY; COMPARATIVE STUDY; COMPUTER SIMULATION; DIFFUSION; DNA BASE COMPOSITION; ELECTROCHEMISTRY; ELECTROMAGNETIC FIELD; ELECTROPORATION; EVALUATION STUDY; MEMBRANE POTENTIAL; METABOLISM; MOLECULAR GENETICS; NANOTECHNOLOGY; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; POROSITY; PROCEDURES; RADIATION RESPONSE; STATIC ELECTRICITY; STATISTICAL MODEL; VALIDATION STUDY;

BASE COMPOSITION; BASE SEQUENCE; BIOLOGICAL TRANSPORT, ACTIVE; CELL MEMBRANE; CELL MEMBRANE PERMEABILITY; COMPUTER SIMULATION; DIFFUSION; DNA; ELECTROCHEMISTRY; ELECTROMAGNETIC FIELDS; ELECTROPORATION; MEMBRANE POTENTIALS; MODELS, BIOLOGICAL; MODELS, CHEMICAL; MODELS, STATISTICAL; MOLECULAR SEQUENCE DATA; NANOTECHNOLOGY; POROSITY; STATIC ELECTRICITY;

EID: 84990946704     PISSN: 1063651X     EISSN: None     Source Type: Journal    
DOI: 10.1103/PhysRevE.68.041910     Document Type: Article

References (17)

1. B. Alberts et al., Molecular Biology of The Cell (Garland, New York, 1994).
2. M. T. Madigan, J. M. Matinko, and J. Parker, Biology of Microorganisms (Prentice-Hall, Englewood Cliffs, NJ, 1997).
3. L. Song, Science 274, 1859 (1996).
4. J. Kasianowicz, E. Brandin, D. Branton, and D.W. Deamer, Proc. Natl. Acad. Sci. U.S.A. 93, 13770 (1996).
5. S.E. Henrickson, M. Misakian, B. Robertson, and J.J. Kasianowicz, Phys. Rev. Lett. 85, 3057 (2000).
6. A. Meller, L. Nivon, and D. Branton, Phys. Rev. Lett. 86, 3435 (2001).
7. A. Meller, and D. Branton, Electrophoresis 23, 2583 (2002).
8. W. Sung and P.J. Park, Phys. Rev. Lett. 77, 783 (1996).
9. M. Muthukumar, J. Chem. Phys. 111, 10371 (1999).
10. T. Ambjornsson, S.P. Apell, Z. Konkoli, E.A. Di Marzio, and J.J. Kasianowicz, J. Chem. Phys. 117, 4063 (2002).
11. D.K. Lubensky and D.R. Nelson, Biophys. J. 77, 1824 (2001).
12. A.M. Berezhkovskii and I.V. Gopich, Biophys. J. 84, 787 (2003).
13. M. Doi and S. F. Edwards, The Theory of Polymer Dynamics (Clarendon Press, Oxford, 1986).
14. A. Bar-Haim and J. Klafter, J. Chem. Phys. 109, 5187 (1998).
15. N.L. Goddard, G. Bonnet, O. Krichevsky, and A. Libchaber, Phys. Rev. Lett. 85, 2400 (2000).
16. M. Bates, M. Burns, and A. Meller, Biophys. J. 84, 2366 (2003).
17. Y. Huang and W.F. McColl, J. Phys. A 30, 7919 (1997).