Free-breathing volumetric fat/water separation by combining radial sampling, compressed sensing, and parallel imaging

Magnetic Resonance in Medicine

Volumn 78, Issue 2, 2017, Pages 565-576

  Benkert, Thomas ^a   Feng, Li ^a   Sodickson, Daniel K ^a   Chandarana, Hersh ^a   Block, Kai Tobias ^a  

^a NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

compressed sensing; Dixon imaging; fat water separation; free breathing; radial sampling

Indexed keywords

COMPRESSED SENSING; MAGNETIC RESONANCE; MEDICAL IMAGING;

DYNAMIC CONTRAST ENHANCED; FREE BREATHING; HIGH TEMPORAL RESOLUTION; INTERNATIONAL SOCIETY; MODEL BASED RECONSTRUCTION; RADIAL SAMPLING; SEPARATED MEASUREMENTS; SEPARATION TECHNIQUES;

SEPARATION;

ABDOMEN; ADULT; AGED; ARTICLE; ARTIFACT REDUCTION; BREAST EXAMINATION; BREATHING; CHILD; CLINICAL ARTICLE; COMPRESSED SENSING; DIXON RADIAL VOLUMETRIC ENCODING; DYNAMIC CONTRAST ENHANCED DIXON RADIAL VOLUMETRIC ENCODING; DYNAMIC CONTRAST-ENHANCED MAGNETIC RESONANCE IMAGING; EXTRA DIMENSIONAL DIXON RADIAL VOLUMETRIC ENCODING; FEMALE; HUMAN; IMAGE PROCESSING; IMAGE RECONSTRUCTION; IMAGING; LIVER EXAMINATION; MALE; MIDDLE AGED; NUCLEAR MAGNETIC RESONANCE SCANNER; PARALLEL IMAGING; PRESCHOOL CHILD; PROSPECTIVE STUDY; RADIAL SAMPLING; SIGNAL PROCESSING; THREE DIMENSIONAL IMAGING; VERY ELDERLY; ALGORITHM; BREAST; CHEMISTRY; DIAGNOSTIC IMAGING; NUCLEAR MAGNETIC RESONANCE IMAGING; PROCEDURES;

FAT; WATER;

ABDOMEN; ADULT; AGED, 80 AND OVER; ALGORITHMS; BREAST; CHILD, PRESCHOOL; FATS; FEMALE; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; IMAGING, THREE-DIMENSIONAL; MAGNETIC RESONANCE IMAGING; MALE; MIDDLE AGED; RESPIRATION; WATER;

EID: 84987621867     PISSN: 07403194     EISSN: 15222594     Source Type: Journal    
DOI: 10.1002/mrm.26392     Document Type: Article

References (45)

1. Bley TA, Wieben O, François CJ, Brittain JH, Reeder SB. Fat and water magnetic resonance imaging. J Magn Reson Imaging 2010;31:4–18.
2. Eggers H, Börnert P. Chemical shift encoding-based water-fat separation methods. J Magn Reson Imaging 2014;40:251–268.
3. Ma J, Bankson JA, Stafford RJ. Multipoint Dixon imaging using sensitivity encoding. In Proceedings of the 11th Annual Meeting of ISMRM, Toronto, Canada, 2003. Abstract 1069.
4. Doneva M, Börnert P, Eggers H, Mertins A, Pauly J, Lustig M. Compressed sensing for chemical shift-based water-fat separation. Magn Reson Med 2010;64:1749–1759.
5. Sharma SD, Hu HH, Nayak KS. Accelerated water-fat imaging using restricted subspace field map estimation and compressed sensing. Magn Reson Med 2012;67:650–659.
6. Sharma SD, Hu HH, Nayak KS. Chemical shift encoded water-fat separation using parallel imaging and compressed sensing. Magn Reson Med 2013;69:456–466.
7. Wiens CN, McCurdy CM, Willig-Onwuachi JD, McKenzie CA. R2*-corrected water-fat imaging using compressed sensing and parallel imaging. Magn Reson Med 2013;71:608–616.
8. Glover GH, Pauly JM. Projection reconstruction techniques for reduction of motion effects in MRI. Magn Reson Med 1992;28:275–289.
9. Block KT, Chandarana H, Milla S, et al. Towards routine clinical use of radial stack-of-stars 3D gradient-echo sequences for reducing motion sensitivity. J Korean Soc Magn Reson Med 2014;18:87–106.
10. Chandarana H, Block TK, Rosenkrantz AB, Lim RP, Kim D, Mossa DJ, Babb JS, Kiefer B, Lee VS. Free-breathing radial 3D fat-suppressed T1-weighted gradient echo sequence: a viable alternative for contrast-enhanced liver imaging in patients unable to suspend respiration. Invest Radiol 2011;46:648–653.
11. Wülbern JH, Doneva M, Eggers H, Stehning C, Börnert P. Dixon imaging with golden angle stack of stars acquisition. In Proceedings of the 23rd Annual Meeting of ISMRM, Toronto, Canada, 2015. Abstract 3648.
12. Armstrong T, Dregely I, Zhou Z, Sung K, Hu P, Wu H. Free-breathing fat-water-separated liver MRI using a multi-echo 3D stack-of-stars technique. In Proceedings of the 23rd Annual Meeting of ISMRM, Toronto, Canada, 2015. Abstract 143.
13. Sengupta S, Smith DS, Gifford A, Welch EB. Whole-body continuously moving table fat-water MRI with dynamic B0 shimming at 3 Tesla. Magn Reson Med 2016;76:183–190.
14. Liu J, Nguyen TD, Zhu Y, Spincemaille P, Prince MR, Weinsaft JW, Saloner D, Wang Y. Self-gated free-breathing 3D coronary CINE imaging with simultaneous water and fat visualization. PLoS One 2014;9:1–8.
15. Moran CJ, Brodsky EK, Bancroft LH, Reeder SB, Yu H, Kijowski R, Engel D, Block WF. High-resolution 3D radial bSSFP with IDEAL. Magn Reson Med 2014;71:95–104.
16. Saranathan M, Glockner J. Three-dimensional dixon fat-water separated rapid breathheld imaging of myocardial infarction. J Magn Reson Imaging 2013;38:1362–1368.
17. Brodsky EK, Holmes JH, Yu H, Reeder SB. Generalized k-space decomposition with chemical shift correction for non-Cartesian water-fat imaging. Magn Reson Med 2008;59:1151–1164.
18. Feng L, Axel L, Chandarana H, Block KT, Sodickson DK, Otazo R. XD-GRASP: golden-angle radial MRI with reconstruction of extra motion-state dimensions using compressed sensing. Magn Reson Med 2016;75:775–788.
19. Hu HH, Börnert P, Hernando D, Kellman P, Ma J, Reeder SB, Sirlin C. ISMRM workshop on fat-water separation: insights, applications and progress in MRI. Magn Reson Med 2012;68:378–388.
20. Chandarana H, Feng L, Ream J, Wang A, Babb JS, Block KT, Sodickson DK, Otazo R. Respiratory motion-resolved compressed sensing reconstruction of free-breathing radial acquisition for dynamic liver magnetic resonance imaging. Invest Radiol 2015;50:749–756.
21. Spincemaille P, Liu J, Nguyen T, Prince MR, Wang Y. Z intensity-weighted position self-respiratory gating method for free-breathing 3D cardiac CINE imaging. Magn Reson Med 2011;29:861–868.
22. Feng L, Grimm R, Block KT, Chandarana H, Kim SG, Xu J, Axel L, Sodickson DK, Otazo R. Golden-angle radial sparse parallel MRI: combination of compressed sensing, parallel imaging, and golden-angle radial sampling for fast and flexible dynamic volumetric MRI. Magn Reson Med 2014;72:707–717.
23. Kim SG, Feng L, Grimm R, Freed M, Block KT, Sodickson DK, Moy L, Otazo R. Influence of temporal regularization and radial undersampling factor on compressed sensing reconstruction in dynamic contrast enhanced MRI of the breast. J Magn Reson Imaging 2016;43:261–269.
24. Winkelmann S, Schaeffter T, Koehler T, Eggers H, Doessel O. An optimal radial profile order based on the golden ratio for time-resolved MRI. IEEE Trans Med Imaging 2007;26:68–76.
25. Gmitro AF, Kono M, Theilmann RJ, Altbach MI, Li Z, Trouard TP. Radial GRASE: implementation and applications. Magn Reson Med 2005;53:1363–1371.
26. Block KT, Uecker M. Simple method for adaptive gradient-delay compensation in radial MRI. In Proceedings of the 19th Annual Meeting of ISMRM, Montreal, Canada, 2011. Abstract 2816.
27. Berglund J, Johansson L, Ahlström H, Kullberg J. Three-point Dixon method enables whole-body water and fat imaging of obese subjects. Magn Reson Med 2010;63:1659–1668.
28. Buehrer M, Pruessmann KP, Boesiger P, Kozerke S. Array compression for MRI with large coil arrays. Magn Reson Med 2007;57:1131–1139.
29. Fessler JA, Sutton BP. Nonuniform fast Fourier transforms using min-max interpolation. IEEE Trans Signal Process 2003;51:560–574.
30. Walsh DO, Gmitro AF, Marcellin MW. Adaptive reconstruction of phased array MR imagery. Magn Reson Med 2000;43:682–690.
31. Block KT, Uecker M, Frahm J. Model-based iterative reconstruction for radial fast spin-echo MRI. IEEE Trans Med Imaging 2009;28:1759–1769.
32. Larson PEZ, Gurney PT, Nishimura DG. Anisotropic field-of-views in radial imaging. IEEE Trans Med Imaging 2008;27:47–57.
33. Wu Z, Han F, Hu P, Nayak KS. Anisotropic field-of-view support for golden angle radial imaging. Magn Reson Med 2015;76:229–236.
34. Hernando D, Kellman P, Haldar JP, Liang Z-P. Robust water/fat separation in the presence of large field inhomogeneities using a graph cut algorithm. J Magn Reson Imaging 2010;63:79–90.
35. Berglund J, Kullberg J. Three-dimensional water/fat separation and T2* estimation based on whole-image optimization: application in breathhold liver imaging at 1.5 T. Magn Reson Med 2012;67:1684–1693.
36. Honorato JL, Parot V, Tejos C, Uribe S, Irarrazaval P. Chemical species separation with simultaneous estimation of field map and T2* using a k-space formulation. Magn Reson Med 2012;68:400–408.
37. Brau AC, Brittain JH. Generalized self-navigated motion detection technique: preliminary investigation in abdominal imaging. Magn Reson Med 2006;55:263–270.
38. Knoll F, Schwarzl A, Diwoky C, Sodickson DK. gpuNUFFT - an open source GPU library for 3D regridding with direct Matlab interface. In Proceedings of the 22nd Annual Meeting of ISMRM, Milan, Italy, 2014. Abstract 4297.
39. Higano NS, Hahn AD, Tkach JA, Cao X, Walkup LL, Thomen RP, Merhar SL, Kingma PS, Fain SB, Woods JC. Retrospective respiratory self-gating and removal of bulk motion in pulmonary UTE MRI of neonates and adults. Magn Reson Med 2017;77:1284–1295.
40. Block TK, Grimm R, Feng L, Otazo R, Chandarana H, Bruno M, Geppert C, Sodickson DK. Bringing compressed sensing to clinical reality: prototypic setup for evaluation in routine applications. In Proceedings of the 21st Annual Meeting of ISMRM, Salt Lake City, Utah, USA, 2013. Abstract 3809.
41. Mann LW, Higgins DM, Peters CN, Cassidy S, Hodson KK, Coombs A, Taylor R, Hollingsworth KG. Accelerating MR imaging liver steatosis measurement using combined compressed sensing and parallel imaging: a quantitative evaluation. Radiology 2016;278:247–256.
42. Khare K, Hardy CJ, King KF, Turski PA, Marinelli L. Accelerated MR imaging using compressive sensing with no free parameters. Magn Reson Med 2012;68:1450–1457.
43. Ramani S, Liu Z, Rosen J, Nielsen JF, Fessler JA. Regularization parameter selection for nonlinear iterative image restoration and mri reconstruction using GCV and SURE-based methods. IEEE Trans Imag Process 2012;21:3659–3672.
44. Yokoo T, Browning JD. Fat and iron quantification in the liver: past, present, and future. Top Magn Reson Imaging 2014;23:73–94.
45. Sharma SD, Hu HH, Nayak KS. Accelerated T2*-compensated fat fraction quantification using a joint parallel imaging and compressed sensing framework. J Magn Reson Imaging 2013;38:1267–1275.