Improving the accuracy of multispectral-based benthic habitats mapping using image rotations: The application of principle component analysis and independent componentanalysis

European Journal of Remote Sensing

Volumn 49, Issue , 2016, Pages 433-463

  Wicaksono, Pramaditya ^a  

^a GADJAH MADA UNIVERSITY   (Indonesia)

Author keywords

Benthic habitats; ICA; Image rotations; Karimunjawa archipelago; PCA; Worldview 2

Indexed keywords

CLASSIFICATION (OF INFORMATION); ECOSYSTEMS; IMAGE ANALYSIS; INDEPENDENT COMPONENT ANALYSIS; PHOTOMAPPING; ROTATION;

BENTHIC HABITATS; CLASSIFICATION PROCESS; IMAGE ROTATION; INDEPENDENT COMPONENT ANALYSIS(ICA); KARIMUNJAWA ARCHIPELAGO; PRINCIPLE COMPONENT ANALYSIS; WATER COLUMN CORRECTION; WORLDVIEW-2;

IMAGE ENHANCEMENT;

ACCURACY ASSESSMENT; BENTHIC ENVIRONMENT; COMPLEXITY; CORAL REEF; DATA SET; IMAGE CLASSIFICATION; IMAGE RESOLUTION; IN SITU MEASUREMENT; MACROALGA; PRINCIPAL COMPONENT ANALYSIS; SATELLITE DATA; SEAGRASS; TRANSECT; WORLDVIEW;

CENTRAL JAVA; GREATER SUNDA ISLANDS; JAVA; KARIMUNJAWA ISLANDS; SUNDA ISLES;

ALGAE; ANTHOZOA;

EID: 84986881689     PISSN: None     EISSN: 22797254     Source Type: Journal    
DOI: 10.5721/EuJRS20164924     Document Type: Article

References (66)

1. Andrefouet S., Kramer P., Torres-Pulliza D., Joyce K.E., Hochberg E.J., Garza-Perez R., Mumby P.J., Riegl B., Yamano H., White W.H., Zubia M., Brock J., Phinn S.R., Naseer A., Hatcher B.G., Muller-Karger F.E. (2003) - Multi-site evaluation of IKONOS data for classification of tropical coral reef environments. Remote Sensing of Environment, 88: 128-143. doi: http://dx.doi.org/10.1016/j.rse.2003.04.005.
2. Benfield S.L., Guzman H.M., Mai, J.M., Young J.T. (2007) - Mapping the distribution of coral reefs and associated sublittoral habitats in Pacific Panama: a comparison of optical satellite sensors and classification methodologies. International Journal of Remote Sensing, 28: 5047-5070. doi: http://dx.doi.org/10.1080/01431160701258062.
3. Bukata R.P., Jerome J.H., Kondratyev K.Y., Pozdnyakov D.V. (1995) - Optical Properties and Remote Sensing of Inland and Coastal Waters. New York: CRC.
4. Capolsini P., Andrefouet S., Rion C., Payri C. (2003) - A Comparison of Landsat ETM+, SPOT HRV, IKONOS, ASTER and airborne MASTER Data for Coral Reef Habitat Mapping in South Pacific Island. Canadian Journal of Remote Sensing, 29 (2): 187-200. doi: http://dx.doi.org/10.5589/m02-088.
5. Cerdeira-Estrada S., Heege T., Kolb M., Ohlendorf S., Uribe A., Muller A., Garza R., Ressl R., Aguirre R., Marino I., Silva R., Martell R. (2012) - Benthic habitat and bathymetry mapping of shallow waters in Puerto morelos reefs using remote sensing with a physics based data processing. IEEE International Geoscience and Remote Sensing Symposium, Munich, pp. 4383-4386. doi: http://dx.doi.org/10.1109/igarss.2012.6350402.
6. Chavez P., Berlin G., Mitchell W. (1977) - Computer Enhancement Techniques of Landsat MSS Digital Images for Landuse/Landcover Assessments. Remote Sensing of Earth Resources, 6: 259.
7. Clores M., Carandang VI J.S. (2013) - Chlorophyll content, productivities and biomass allocations of seagrasses in Talim Bay, Lian, Batangas, Philippines. Proceedings of the International Academy of Ecology and Environmental Sciences, 3 (3): 247-256.
8. Congalton R.G. (1991) - A review of assessing the accuracy of classifications of remotely sensed data. Remote Sensing of Environment, 37: 35-46. doi: http://dx.doi.org/10.1016/0034-4257(91)90048-B.
9. Congalton R.G., Green K. (2009) - Assessing the Accuracy of Remotely Sensed Data: Principles and Practices. Mapping Science, Boca Rotan FL: CRC Press.
10. Costa B.M., Battista T.A. (2013) - The semi-automated classification of acoustic imagery for characterizing coral reef ecosystems. International Journal of Remote Sensing, 34 (18): 6389-6422. doi: http://dx.doi.org/10.1080/01431161.2013.800661.
11. De Leeuw J., Jia H., Yang L., Liu X., Schmidt K., Skidmore A. (2006) - Comparing accuracy assessments to infer superiority of image classification methods. International. International Journal of Remote Sensing, 27: 223-232. doi: http://dx.doi.org/10.1080/01431160500275762.
12. Dierssen H.M., Zimmerman R.C., Drake L.A., Burdige D. (2010) - Benthic ecology from space: optics and net primary production in seagrass and benthic algae across the Great Bahama Bank. Marine Ecology Progress Series, 411: 1-15. doi: http://dx.doi.org/10.3354/meps08665.
13. DigitalGlobe (2014) - DigitalGlobe Core Imagery Product Guide. DigitalGlobe Incorporation.
14. El-Askary H., Abd El-Mawla S.H., Li J., El-Hattab M.M., El-Raey M. (2014) - Change detection of coral reef habitat using Landsat-5 TM, Landsat 7 ETM+ and Landsat 8 OLI data in the Red Sea (Hurghada, Egypt). International Journal of Remote Sensing, 35 (6): 2327-2346.
15. Eugenio F., Marcello J., Martin J. (2015) - High-Resolution Maps of Bathymetry and Benthic Habitats in Shallow-Water Environments Using Multispectral Remote Sensing Imagery. IEEE Transactions on Geoscience and Remote Sensing, 53 (7): 3539-3549. doi: http://dx.doi.org/10.1109/TGRS.2014.2377300.
16. Fonseca A.C., Guzman H.M., Cortes J., Soto C. (2010) - Marine habitats map of "Isla del Caño", Costa Rica, comparing Quickbird and Hymap images classification results. International Journal of Tropical Biology and Conservation, 58 (1): 373-381.
17. Foody G.M. (2004) - Thematic Map Comparison: Evaluating the Statistical Significance of Differences in Classification Accuracy. Photogrammetric Engineering & Remote Sensing, 70 (5): 627-633. doi: http://dx.doi.org/10.14358/PERS.70.5.627.
18. Goodman J.A., Purkis S.J., Phinn S.R. (2013) - Corel Reef Remote Sensing A Guide for Mapping, Monitoring and Management. Phinn S.R. (Ed.), Springer. doi: http://dx.doi.org/10.1007/978-90-481-9292-2.
19. Green A.A., Berman M., Switzer P., Craig M.D. (1988) - A transformation for ordering multispectral data in terms of image quality with implications for noise removal. IEEE Transactions on Geoscience and Remote Sensing, 26: 65-74. doi: http://dx.doi.org/10.1109/36.3001.
20. Green E.P., Mumby P.J., Edwards A.J., Clark C.D. (2000) - Remote Sensing Handbook for Tropical Coastal Management. Coastal Management Sourcebooks 3. Edwards A.J. (Ed.) Paris: UNESCO.
21. Hamylton S., Silverman J., Shaw E. (2013) - The use of remote sensing to scale up measures of carbonate production on reef systems: a comparison of hydrochemical and census-based estimation methods. International Journal of Remote Sensing, 34 (18): 6451-6465. doi: http://dx.doi.org/10.1080/01431161.2013.800654.
22. Hedley J.D., Harborne A.R., Mumby P.J. (2005) - Simple and Robust Removal of Sunglint for Mapping Shallow-Water Benthos. International Journal of Remote Sensing, 26 (10): 2107-2112. doi: http://dx.doi.org/10.1080/01431160500034086.
23. Hedley J.D., Roelfsema C.M., Phinn S.R., Mumby P.J. (2012) - Environmental and sensor limitations in optical remote sensing of coral reefs: implications for monitoring and sensor design. Remote Sensing, 4: 271-302. doi: http://dx.doi.org/10.3390/rs4010271.
24. Hedley J., Mumby P. (2003) - A remote sensing method for resolving depth and subpixel composition of aquatic benthos. Limnology and Oceanography, 48 (1): 480-488. doi: http://dx.doi.org/10.4319/lo.2003.48.1_part_2.0480.
25. Herkül K., Kotta J., Kutser T., Vahtmäe E. (2013) - Relating Remotely Sensed Optical Variability to Marine Benthic Biodiversity. PLoS ONE, 8 (2). doi: http://dx.doi.org/10.1371/journal.pone.0055624.
26. Hochberg E.J., Atkinson M.J. (2003) - Capabilities of remote sensors to classify coral, algae, and sand as pure and mixed spectra. Remote Sensing of Environment, 85: 174-189. doi: http://dx.doi.org/10.1016/S0034-4257(02)00202-X.
27. Hochberg E.J., Atkinson M.J. (2000) - Spectral discrimination of coral reef benthic communities. Coral Reefs, 19: 164-171. doi: http://dx.doi.org/10.1007/s003380000087.
28. Hu L., Liu Z., Liu Z., Hu C., He M. (2014) - Mapping bottom depth and albedo in coastal waters of the South China Sea islands and reefs using Landsat TM and ETM+ data. International Journal of Remote Sensing, 35 (11-12): 4156-4172. doi: http://dx.doi.org/10.1080/01431161.2014.916441.
29. Hyvarinen A., Oja E. (2000) - Independent component analysis: algorithms and applications. Neural Networks, 13 (4-5): 411-430. doi: http://dx.doi.org/10.1016/S0893-6080(00)00026-5.
30. Joyce K.E., Phinn S.R., Roelfsema C.M. (2013) - Live Coral Cover Index Testing and Application with Hyperspectral Airborne Image Data. Remote Sensing, 5: 6116-6137. doi: http://dx.doi.org/10.3390/rs5116116.
31. Jupp D.L. (1988) - Background and extensions to depth of penetration (DOP) mapping in shallow coastal waters. Proceedings of the Symposium on Remote Sensing of the Coastal Zone, Gold Coast, Queensland.
32. Kattenborn T., Maack J., Faßnacht F., Enßle F., Ermert J., Koch B. (2015) - Mapping forest biomass from space - Fusion of hyperspectral EO1-hyperion models. International Journal of Applied Earth Observation and Geoinformation, 35: 359-367. doi: http://dx.doi.org/10.1016/j.jag.2014.10.008.
33. Kay S., Hedley J.D., Lavender S. (2009) - Sun Glint Correction of High and Low Spatial Resolution Images of Aquatic Scenes: a Review of Methods for Visible and Near-Infrared Wavelengths. Remote Sensing, 1: 697-730. doi: http://dx.doi.org/10.3390/rs1040697.
34. Kutser T., Vahtmae E., Mersamaa L. (2006) - Spectral library of macroalgae and benthic substrates in Estonian coastal waters. Proceedings of the Estonian Academy of Sciences, Biology and Ecology, 55 (4): 329-340.
35. Lesser M.P., Mobley C.D. (2007) - Bathymetry, water optical properties, and benthic classification of coral reefs using hyperspectral remote sensing imagery. Coral Reefs, 26: 819-829. doi: http://dx.doi.org/10.1007/s00338-007-0271-5.
36. Lucas M.G., Goodman J. (2015) - Linking Coral Reef Remote Sensing and Field Ecology: It’s a Matter of Scale. Journal of Marine Science and Engineering, 3 (1): 1-20. doi: http://dx.doi.org/10.3390/jmse3010001.
37. Lyzenga D.R. (1978) - Passive Remote-Sensing Techniques for Mapping Water Depth and Bottom Features. Applied Optics, 17: 379-383. doi: http://dx.doi.org/10.1364/AO.17.000379.
38. MacLean M.G., Congalton R.G. (2012) - Map Accuracy Assessment Issues When Using an Object-Oriented Approach. ASPRS 2012 Annual Conference, Sacramento, California.
39. Mishra D., Narumalani S., Rundquist D., Lawson M. (2006) - Benthic Habitat Mapping in Tropical Marine Environments Using QuickBird Multispectral Data. Photogrammetric Engineering Remote Sensing, 72 (9): 1037-1048. doi: http://dx.doi.org/10.14358/PERS.72.9.1037.
40. Mumby P.J., Edwards A.J. (2002) - Mapping marine environments with IKONOS imagery: enhanced spatial resolution does deliver greater thematic accuracy. Remote Sensing of Environment, 82: 248-257. doi: http://dx.doi.org/10.1016/S0034-4257(02)00041-X.
41. Mumby P.J., Harborne A.R. (1999) - Development of a systematic classification scheme of marine habitats to facilitate regional management and mapping of Caribbean coral reefs. Biology Conservation, 88: 155-163. doi: http://dx.doi.org/10.1016/S0006-3207(98)00108-6.
42. Murti S.H., Wicaksono P. (2014) - Analisis Saluran Spektral yang Paling Berpengaruh Dalam Identifikasi Kesehatan Terumbu Karang. Majalah Ilmiah Globe, 16 (2): 113-120.
43. Nababan M.G., Munasik Yulianto I., Kartawijaya T., Prasetia R., Ardiwijaya R.L., Pardede S.T., Sulisyati R., Mulyadi-Syaifudin Y. (2010) - Status Ekosistem di Taman Nasional Karimunjawa: 2010. Bogor: Wildlife Conservation Society-Indonesia Program.
44. Oppelt N., Schulze F., Bartsch I., Doernhoefer K., Eisenhardt I. (2012) - Hyperspectral classification approaches for intertidal macroalgae habitat mapping: a case study in Heligoland. Optical Engineering, 51 (11): 111703. doi: http://dx.doi.org/10.1117/1.oe.51.11.111703.
45. Pe’eri S., McLeod A., Lavoie P., Ackerman S., Gardner J., Parrish C. (2013) - Field calibration and validation of remote-sensing surveys. International Journal of Remote Sensing, 34 (18): 6423-6436. doi: http://dx.doi.org/10.1080/01431161.2013.800655.
46. Penuelas J., Gamon J.A., Griffin K.L., Field C.B. (1993) - Assessing community type, plant biomass, pigment composition, and photosynthetic efficiency of aquatic vegetation from spectral reflectance. Remote Sensing of Environment, 46 (2): 110-118. doi: http://dx.doi.org/10.1016/0034-4257(93)90088-F.
47. Phinn S.R., Roelfsema C.M., Mumby P.J. (2012) - Multi-scale, object-based image analysis for mapping geomorphic and ecological zones on coral reefs. International Journal of Remote Sensing, 33 (12): 3768-3797. doi: http://dx.doi.org/10.1080/01431161.2011.633122.
48. Phinn S.R., Roelfsema C.M., Brando V., Anstee J. (2008) - Mapping seagrass species, cover and biomass in shallow waters: An assessment of satellite multi-spectral and airborne hyper-spectral imaging systems in Moreton Bay (Australia). Remote Sensing of Environment, 112: 3413-3425. doi: http://dx.doi.org/10.1016/j.rse.2007.09.017.
49. Pu R., Bell S., Meyer C., Baggett L., Zhao Y. (2012) - Mapping and assessing seagrass along the western coast of Florida using Landsat TM and EO-1 ALI/Hyperion imagery. Estuarine, Coastal and Shelf Science, 115: 234-245. doi: http://dx.doi.org/10.1016/j.ecss.2012.09.006.
50. Richards J.A. (1999) - Remote Sensing Digital Image Analysis: An Introduction. Berlin, Germany: Springer-Verlag. doi: http://dx.doi.org/10.1007/978-3-662-03978-6.
51. Roelfsema C.M., Phinn S.R. (2009) - A manual for conducting georeferenced photo transects surveys to assess the benthos of coral reef and seagrass habitats. Queensland: Centre for Remote Sensing & Spatial Information Science, School of Geography, Planning Environmental Management, University of Queensland.
52. Roelfsema C.M., Lyons M., Kovacs E.M., Maxwell P., Saunders M.I., Samper-Villarreal J., Phinn S. (2014) - Multi-temporal mapping of seagrass cover, species and biomass: A semi-automated object based image analysis approach. Remote Sensing of Environment, 150: 172-187. doi: http://dx.doi.org/10.1016/j.rse.2014.05.001.
53. Roelfsema C., Phinn S., Jupiter S., Comley J., Albert S. (2013) - Mapping coral reefs at reef to reef-system scales, 10s-1000s km2, using object-based image analysis. International Journal of Remote Sensing, 34 (18): 6367-6388. doi: http://dx.doi.org/10.1080/01431161.2013.800660.
54. Shapiro A.C., Rohmann S.O. (2005) - Summit-to-sea mapping and change detection using satellite imagery: tools for conservation and management of coral reefs. Revista de Biología Tropical, 53 (1): 185-193.
55. Su L., Huang Y. (2009) - Support vector machine classification: Comparison of linkage techniques using a clustering-based method for training data selection. GIScience & Remote Sensing, 46 (4): 411-423. doi: http://dx.doi.org/10.2747/1548-1603.46.4.411.
56. Tran V., Phinn S., Roelfsema C. (2012) - Coral Reef Mapping in Vietnam’s Coastal Waters from High-spatial Resolution Satellite and Field Survey Data. Asian Journal of Geoinformatics, 12 (2).
57. Updike T., Comp C. (2010) - Radiometric Use of WorldView-2 Imagery. Longmont, Colorado: DigitalGlobe®.
58. Vahtmae E., Kutser T., Kotta J., Parnoja M. (2011) - Detecting patterns and changes in a complex benthic environment of the Baltic Sea. Journal of Applied Remote Sensing, 5. doi: http://dx.doi.org/10.1117/1.3653271.
59. Velloth S., Mupparthy R.S., Raghavan B.R., Nayak S. (2014) - Coupled correction and classification of hyperspectral imagery for mapping coral reefs of Agatti and Flat Islands, India. International Journal of Remote Sensing, 35 (14): 5544-5561. doi: http://dx.doi.org/10.1080/01431161.2014.926410.
60. Wicaksono P. (2014) - Pemetaan Makro Alga Menggunakan Citra Penginderaan Jauh Resolusi Spasial Tinggi di Pulau Kemujan Kepulauan Karimunjawa. Seminar Nasional Teknologi Terapan II, Yogyakarta: Sekolah Vokasi UGM.
61. Wicaksono P. (2015) - Perbandingan Akurasi Metode Band Tunggal dan Band Rasio dalam Pemetaan Batimetri Pada Laut Dangkal Optis. Prosiding Simposium Sains Geoinformasi IV - 2015, pp. 802-810, Yogyakarta: PUSPICS Fakultas Geografi UGM.
62. Wicaksono P., Hafizt M. (2013) - Mapping seagrass from space: Addressing the complexity of seagrass LAI mapping. European Journal of Remote Sensing, 46: 18-39. doi: http://dx.doi.org/10.5721/EuJRS20134602.
63. th International Surveyors Congress. "Innovation towards Sustainability", Kuala Lumpur: SEASC.
64. Wicaksono P., Danoedoro P., Hartono Nehren U. (2016) - Mangrove biomass carbon stock mapping of the Karimunjawa Islands using multispectral remote sensing. International Journal of Remote Sensing, 37 (1): 26-52. doi: http://dx.doi.org/10.1080/01431161.2015.1117679.
65. Zapata-Ramirez P.A., Blanchon P., Olioso A., Hernandez-Nunez H., Sobrino J.A. (2013) - Accuracy of IKONOS for mapping benthic coral-reef habitats: a case study from the Puerto Morelos Reef National Park, Mexico. International Journal of Remote Sensing, 34 (9-10): 3671-3687. doi: http://dx.doi.org/10.1080/01431161.2012.716922.
66. Zhang C., Selch D., Xie Z., Roberts C., Cooper H., Chen G. (2013) - Object-based benthic habitat mapping in the Florida Keys from hyperspectral imagery. Estuarine, Coastal and Shelf Science, 134: 88-97. doi: http://dx.doi.org/10.1016/j.ecss.2013.09.018.