-
1
-
-
0032716841
-
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
-
Ali Azam, T., Iwata, A., Nishimura, A., Ueda, S., and Ishihama, A. (1999) Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J bacteriol 181: 6361–6370.
-
(1999)
J bacteriol
, vol.181
, pp. 6361-6370
-
-
Ali Azam, T.1
Iwata, A.2
Nishimura, A.3
Ueda, S.4
Ishihama, A.5
-
2
-
-
84959423164
-
Time-resolved proteomic analysis of quorum sensing in
-
Bagert, J.D., van Kessel, J.C., Sweredoski, M.J., Feng, L., Hess, S., Bassler, B.L., and Tirrell, D.A. (2016) Time-resolved proteomic analysis of quorum sensing in. Chem Sci 7: 1797–1806.
-
(2016)
Chem Sci
, vol.7
, pp. 1797-1806
-
-
Bagert, J.D.1
van Kessel, J.C.2
Sweredoski, M.J.3
Feng, L.4
Hess, S.5
Bassler, B.L.6
Tirrell, D.A.7
-
3
-
-
84920894689
-
Structural and functional basis of transcriptional regulation by TetR family protein CprB from S. coelicolor A3(2)
-
Bhukya, H., Bhujbalrao, R., Bitra, A., and Anand, R. (2014) Structural and functional basis of transcriptional regulation by TetR family protein CprB from S. coelicolor A3(2). Nucleic Acids Res 42: 10122–10133.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 10122-10133
-
-
Bhukya, H.1
Bhujbalrao, R.2
Bitra, A.3
Anand, R.4
-
4
-
-
84905049901
-
Trimmomatic: a flexible trimmer for Illumina sequence data
-
Bolger, A.M., Lohse, M. and Usadel, B. (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30: 2114–2120.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
5
-
-
78649640318
-
Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression
-
Browning, D.F., Grainger, D.C., and Busby, S.J. (2010) Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression. Curr Opin Microbiol 13: 773–780.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 773-780
-
-
Browning, D.F.1
Grainger, D.C.2
Busby, S.J.3
-
6
-
-
0022361507
-
Salmonella typhimurium proP gene encodes a transport system for the osmoprotectant betaine
-
Cairney, J., Booth, I.R., and Higgins, C.F. (1985) Salmonella typhimurium proP gene encodes a transport system for the osmoprotectant betaine. J bacteriol 164: 1218–1223.
-
(1985)
J bacteriol
, vol.164
, pp. 1218-1223
-
-
Cairney, J.1
Booth, I.R.2
Higgins, C.F.3
-
7
-
-
0036033750
-
MetR and CRP bind to the Vibrio harveyi lux promoters and regulate luminescence
-
Chatterjee, J., Miyamoto, C.M., Zouzoulas, A., Lang, B.F., Skouris, N., and Meighen, E.A. (2002) MetR and CRP bind to the Vibrio harveyi lux promoters and regulate luminescence. Mol Microbiol 46: 101–111.
-
(2002)
Mol Microbiol
, vol.46
, pp. 101-111
-
-
Chatterjee, J.1
Miyamoto, C.M.2
Zouzoulas, A.3
Lang, B.F.4
Skouris, N.5
Meighen, E.A.6
-
8
-
-
84893745931
-
Vitamin B12 regulates photosystem gene expression via the CrtJ antirepressor AerR in Rhodobacter capsulatus
-
Cheng, Z., Li, K., Hammad, L.A., Karty, J.A., and Bauer, C.E. (2014) Vitamin B12 regulates photosystem gene expression via the CrtJ antirepressor AerR in Rhodobacter capsulatus. Mol Microbiol 91: 649–664.
-
(2014)
Mol Microbiol
, vol.91
, pp. 649-664
-
-
Cheng, Z.1
Li, K.2
Hammad, L.A.3
Karty, J.A.4
Bauer, C.E.5
-
9
-
-
34547645608
-
Crystal structure of the Vibrio cholerae quorum-sensing regulatory protein HapR
-
De Silva, R.S., Kovacikova, G., Lin, W., Taylor, R.K., Skorupski, K., and Kull, F.J. (2007) Crystal structure of the Vibrio cholerae quorum-sensing regulatory protein HapR. J Bacteriol 189: 5683–5691.
-
(2007)
J Bacteriol
, vol.189
, pp. 5683-5691
-
-
De Silva, R.S.1
Kovacikova, G.2
Lin, W.3
Taylor, R.K.4
Skorupski, K.5
Kull, F.J.6
-
10
-
-
76949089832
-
Bacterial nucleoid-associated proteins, nucleoid structure and gene expression
-
Dillon, S.C., and Dorman, C.J. (2010) Bacterial nucleoid-associated proteins, nucleoid structure and gene expression. Nat Rev Microbiol 8: 185–195.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 185-195
-
-
Dillon, S.C.1
Dorman, C.J.2
-
11
-
-
0028307609
-
Growth phase variation of integration host factor level in Escherichia coli
-
Ditto, M.D., Roberts, D., and Weisberg, R.A. (1994) Growth phase variation of integration host factor level in Escherichia coli. J bacteriol 176: 3738–3748.
-
(1994)
J bacteriol
, vol.176
, pp. 3738-3748
-
-
Ditto, M.D.1
Roberts, D.2
Weisberg, R.A.3
-
12
-
-
0031568786
-
A good turn for DNA: the structure of integration host factor bound to DNA
-
Ellenberger, T. and Landy, A. (1997) A good turn for DNA: the structure of integration host factor bound to DNA. Structure 5: 153–157.
-
(1997)
Structure
, vol.5
, pp. 153-157
-
-
Ellenberger, T.1
Landy, A.2
-
13
-
-
0032927738
-
A genetic analysis of the function of LuxO, a two-component response regulator involved in quorum sensing in Vibrio harveyi
-
Freeman, J.A. and Bassler, B.L. (1999) A genetic analysis of the function of LuxO, a two-component response regulator involved in quorum sensing in Vibrio harveyi. Mol Microbiol 31: 665–677.
-
(1999)
Mol Microbiol
, vol.31
, pp. 665-677
-
-
Freeman, J.A.1
Bassler, B.L.2
-
14
-
-
0024291348
-
Integration host factor: a protein for all reasons
-
Friedman, D.I. (1988) Integration host factor: a protein for all reasons. Cell 55: 545–554.
-
(1988)
Cell
, vol.55
, pp. 545-554
-
-
Friedman, D.I.1
-
15
-
-
12344280872
-
Cooperative interactions between bacteriophage P2 integrase and its accessory factors IHF and Cox
-
Frumerie, C., Sylwan, L., Ahlgren-Berg, A., and Haggard-Ljungquist, E. (2005) Cooperative interactions between bacteriophage P2 integrase and its accessory factors IHF and Cox. Virology 332: 284–294.
-
(2005)
Virology
, vol.332
, pp. 284-294
-
-
Frumerie, C.1
Sylwan, L.2
Ahlgren-Berg, A.3
Haggard-Ljungquist, E.4
-
16
-
-
0022553616
-
Role of Escherichia coli IHF protein in lambda site-specific recombination. A mutational analysis of binding sites
-
Gardner, J.F. and Nash, H.A. (1986) Role of Escherichia coli IHF protein in lambda site-specific recombination. A mutational analysis of binding sites. J Mol Biol 191: 181–189.
-
(1986)
J Mol Biol
, vol.191
, pp. 181-189
-
-
Gardner, J.F.1
Nash, H.A.2
-
17
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson, D.G., Young, L., Chuang, R.Y., Venter, J.C., Hutchison, C.A., 3rd, and Smith, H.O. (2009) Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods 6: 343–345.
-
(2009)
Nat Methods
, vol.6
, pp. 343-345
-
-
Gibson, D.G.1
Young, L.2
Chuang, R.Y.3
Venter, J.C.4
Hutchison, C.A.5
Smith, H.O.6
-
18
-
-
79953300078
-
FIMO: scanning for occurrences of a given motif
-
Grant, C.E., Bailey, T.L., and Noble, W.S. (2011) FIMO: scanning for occurrences of a given motif. Bioinformatics 27: 1017–1018.
-
(2011)
Bioinformatics
, vol.27
, pp. 1017-1018
-
-
Grant, C.E.1
Bailey, T.L.2
Noble, W.S.3
-
19
-
-
0025012093
-
The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons
-
Hoover, T.R., Santero, E., Porter, S. and Kustu, S. (1990) The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons. Cell 63: 11–22.
-
(1990)
Cell
, vol.63
, pp. 11-22
-
-
Hoover, T.R.1
Santero, E.2
Porter, S.3
Kustu, S.4
-
20
-
-
0242665345
-
SmcR and cyclic AMP receptor protein coactivate Vibrio vulnificus vvpE encoding elastase through the RpoS-dependent promoter in a synergistic manner
-
Jeong, H.S., Lee, M.H., Lee, K.H., Park, S.J., and Choi, S.H. (2003) SmcR and cyclic AMP receptor protein coactivate Vibrio vulnificus vvpE encoding elastase through the RpoS-dependent promoter in a synergistic manner. J Biol Chem 278: 45072–45081.
-
(2003)
J Biol Chem
, vol.278
, pp. 45072-45081
-
-
Jeong, H.S.1
Lee, M.H.2
Lee, K.H.3
Park, S.J.4
Choi, S.H.5
-
21
-
-
77951239948
-
Direct interaction between quorum-sensing regulator SmcR and RNA polymerase is mediated by integration host factor to activate vvpE encoding elastase in Vibrio vulnificus
-
Jeong, H.S., Kim, S.M., Lim, M.S., Kim, K.S., and Choi, S.H. (2010) Direct interaction between quorum-sensing regulator SmcR and RNA polymerase is mediated by integration host factor to activate vvpE encoding elastase in Vibrio vulnificus. J Biol Chem 285: 9357–9366.
-
(2010)
J Biol Chem
, vol.285
, pp. 9357-9366
-
-
Jeong, H.S.1
Kim, S.M.2
Lim, M.S.3
Kim, K.S.4
Choi, S.H.5
-
22
-
-
0030696361
-
Characterization of hapR, a positive regulator of the Vibrio cholerae HA/protease gene hap, and its identification as a functional homologue of the Vibrio harveyi luxR gene
-
Jobling, M.G. and Holmes, R.K. (1997) Characterization of hapR, a positive regulator of the Vibrio cholerae HA/protease gene hap, and its identification as a functional homologue of the Vibrio harveyi luxR gene. Mol Microbiol 26: 1023–1034.
-
(1997)
Mol Microbiol
, vol.26
, pp. 1023-1034
-
-
Jobling, M.G.1
Holmes, R.K.2
-
23
-
-
84861306825
-
Identification of novel DNA-binding proteins using DNA-affinity chromatography/pull down
-
Chapter 1 Unit1F 1
-
Jutras, B.L., Verma, A. and Stevenson, B. (2012) Identification of novel DNA-binding proteins using DNA-affinity chromatography/pull down. Curr Protoc Microbiol Chapter 1: Unit1F 1.
-
(2012)
Curr Protoc Microbiol
-
-
Jutras, B.L.1
Verma, A.2
Stevenson, B.3
-
24
-
-
0024814234
-
Bending of DNA by gene-regulatory proteins: construction and use of a DNA bending vector
-
Kim, J., Zwieb, C., Wu, C., and Adhya, S. (1989) Bending of DNA by gene-regulatory proteins: construction and use of a DNA bending vector. Gene 85: 15–23.
-
(1989)
Gene
, vol.85
, pp. 15-23
-
-
Kim, J.1
Zwieb, C.2
Wu, C.3
Adhya, S.4
-
25
-
-
77951550033
-
Crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription
-
Kim, Y., Kim, B.S., Park, Y.J., Choi, W.C., Hwang, J., Kang, B.S., Oh, T.K., Choi, S.H., and Kim, M.H. (2010) Crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription. J Biol Chem 285: 14020–14030.
-
(2010)
J Biol Chem
, vol.285
, pp. 14020-14030
-
-
Kim, Y.1
Kim, B.S.2
Park, Y.J.3
Choi, W.C.4
Hwang, J.5
Kang, B.S.6
Oh, T.K.7
Choi, S.H.8
Kim, M.H.9
-
26
-
-
33845504065
-
Direct observation of DNA bending/unbending kinetics in complex with DNA-bending protein IHF
-
Kuznetsov, S.V., Sugimura, S., Vivas, P., Crothers, D.M., and Ansari, A. (2006) Direct observation of DNA bending/unbending kinetics in complex with DNA-bending protein IHF. Proc Natl Acad Sci USA 103: 18515–18520.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18515-18520
-
-
Kuznetsov, S.V.1
Sugimura, S.2
Vivas, P.3
Crothers, D.M.4
Ansari, A.5
-
27
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead, B. and Salzberg, S.L. (2012) Fast gapped-read alignment with Bowtie 2. Nat Methods 9: 357–359.
-
(2012)
Nat Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
28
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
Love, M.I., Huber, W., and Anders, S. (2014) Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol 15: 550.
-
(2014)
Genome Biol
, vol.15
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
29
-
-
0031750819
-
OpaR, a homolog of Vibrio harveyi LuxR, controls opacity of Vibrio parahaemolyticus
-
McCarter, L.L. (1998) OpaR, a homolog of Vibrio harveyi LuxR, controls opacity of Vibrio parahaemolyticus. J Bacteriol 180: 3166–3173.
-
(1998)
J Bacteriol
, vol.180
, pp. 3166-3173
-
-
McCarter, L.L.1
-
30
-
-
0023753670
-
Organization of the lux structural genes of Vibrio harveyi. Expression under the T7 bacteriophage promoter, mRNA analysis, and nucleotide sequence of the luxD gene
-
Miyamoto, C.M., Boylan, M., Graham, A.F., and Meighen, E.A. (1988a) Organization of the lux structural genes of Vibrio harveyi. Expression under the T7 bacteriophage promoter, mRNA analysis, and nucleotide sequence of the luxD gene. J Biol Chem 263: 13393–13399.
-
(1988)
J Biol Chem
, vol.263
, pp. 13393-13399
-
-
Miyamoto, C.M.1
Boylan, M.2
Graham, A.F.3
Meighen, E.A.4
-
31
-
-
0024296332
-
Nucleotide sequence of the LuxC gene and the upstream DNA from the bioluminescent system of Vibrio harveyi
-
Miyamoto, C.M., Graham, A.F., and Meighen, E.A. (1988b) Nucleotide sequence of the LuxC gene and the upstream DNA from the bioluminescent system of Vibrio harveyi. Nucleic Acids Res 16: 1551–1562.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 1551-1562
-
-
Miyamoto, C.M.1
Graham, A.F.2
Meighen, E.A.3
-
32
-
-
0027943591
-
Proximal and distal sites bind LuxR independently and activate expression of the Vibrio harveyi lux operon
-
Miyamoto, C.M., Smith, E.E., Swartzman, E., Cao, J.G., Graham, A.F., and Meighen, E.A. (1994) Proximal and distal sites bind LuxR independently and activate expression of the Vibrio harveyi lux operon. Mol Microbiol 14: 255–262.
-
(1994)
Mol Microbiol
, vol.14
, pp. 255-262
-
-
Miyamoto, C.M.1
Smith, E.E.2
Swartzman, E.3
Cao, J.G.4
Graham, A.F.5
Meighen, E.A.6
-
33
-
-
0024340762
-
DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase
-
Moitoso de Vargas, L., Kim, S., and Landy, A. (1989) DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase. Science 244: 1457–1461.
-
(1989)
Science
, vol.244
, pp. 1457-1461
-
-
Moitoso de Vargas, L.1
Kim, S.2
Landy, A.3
-
34
-
-
73349114916
-
Bacterial quorum-sensing network architectures
-
Ng, W.L. and Bassler, B.L. (2009) Bacterial quorum-sensing network architectures. Annu Rev Genet 43: 197–222.
-
(2009)
Annu Rev Genet
, vol.43
, pp. 197-222
-
-
Ng, W.L.1
Bassler, B.L.2
-
35
-
-
33645986125
-
Bacteriophage lambda gpNu1 and Escherichia coli IHF proteins cooperatively bind and bend viral DNA: implications for the assembly of a genome-packaging motor
-
Ortega, M.E. and Catalano, C.E. (2006) Bacteriophage lambda gpNu1 and Escherichia coli IHF proteins cooperatively bind and bend viral DNA: implications for the assembly of a genome-packaging motor. Biochemistry-Us 45: 5180–5189.
-
(2006)
Biochemistry-Us
, vol.45
, pp. 5180-5189
-
-
Ortega, M.E.1
Catalano, C.E.2
-
36
-
-
62149126906
-
Virulence of luminescent and non-luminescent isogenic vibrios towards gnotobiotic Artemia franciscana larvae and specific pathogen-free Litopenaeus vannamei shrimp
-
Phuoc, L.H., Defoirdt, T., Sorgeloos, P., and Bossier, P. (2009) Virulence of luminescent and non-luminescent isogenic vibrios towards gnotobiotic Artemia franciscana larvae and specific pathogen-free Litopenaeus vannamei shrimp. J Appl Microbiol 106: 1388–1396.
-
(2009)
J Appl Microbiol
, vol.106
, pp. 1388-1396
-
-
Phuoc, L.H.1
Defoirdt, T.2
Sorgeloos, P.3
Bossier, P.4
-
37
-
-
51649120144
-
The Vibrio harveyi master quorum-sensing regulator, LuxR, a TetR-type protein is both an activator and a repressor: DNA recognition and binding specificity at target promoters
-
Pompeani, A.J., Irgon, J.J., Berger, M.F., Bulyk, M.L., Wingreen, N.S., and Bassler, B.L. (2008) The Vibrio harveyi master quorum-sensing regulator, LuxR, a TetR-type protein is both an activator and a repressor: DNA recognition and binding specificity at target promoters. Mol Microbiol 70: 76–88.
-
(2008)
Mol Microbiol
, vol.70
, pp. 76-88
-
-
Pompeani, A.J.1
Irgon, J.J.2
Berger, M.F.3
Bulyk, M.L.4
Wingreen, N.S.5
Bassler, B.L.6
-
38
-
-
0031052180
-
Making DNA do a U-turn: IHF and related proteins
-
Rice, P.A. (1997) Making DNA do a U-turn: IHF and related proteins. Curr Opin Struct Biol 7: 86–93.
-
(1997)
Curr Opin Struct Biol
, vol.7
, pp. 86-93
-
-
Rice, P.A.1
-
39
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn
-
Rice, P.A., Yang, S., Mizuuchi, K., and Nash, H.A. (1996) Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn. Cell 87: 1295–1306.
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.2
Mizuuchi, K.3
Nash, H.A.4
-
40
-
-
79951686628
-
AphA and LuxR/HapR reciprocally control quorum sensing in vibrios
-
Rutherford, S.T., van Kessel, J.C., Shao, Y., and Bassler, B.L. (2011) AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. Genes Dev 25: 397–408.
-
(2011)
Genes Dev
, vol.25
, pp. 397-408
-
-
Rutherford, S.T.1
van Kessel, J.C.2
Shao, Y.3
Bassler, B.L.4
-
41
-
-
84955505799
-
Expression and quorum sensing regulation of type III secretion system genes of Vibrio harveyi during infection of gnotobiotic brine shrimp
-
Ruwandeepika, H.A., Karunasagar, I., Bossier, P. and Defoirdt, T. (2015) Expression and quorum sensing regulation of type III secretion system genes of Vibrio harveyi during infection of gnotobiotic brine shrimp. PloS One 10: e0143935.
-
(2015)
PloS One
, vol.10
-
-
Ruwandeepika, H.A.1
Karunasagar, I.2
Bossier, P.3
Defoirdt, T.4
-
42
-
-
0036500260
-
Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR
-
Schumacher, M.A., Miller, M.C., Grkovic, S., Brown, M.H., Skurray, R.A. and Brennan, R.G. (2002) Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR. Embo J 21: 1210–1218.
-
(2002)
Embo J
, vol.21
, pp. 1210-1218
-
-
Schumacher, M.A.1
Miller, M.C.2
Grkovic, S.3
Brown, M.H.4
Skurray, R.A.5
Brennan, R.G.6
-
43
-
-
84890114269
-
Cyclic di-GMP inhibits Vibrio cholerae motility by repressing induction of transcription and inducing extracellular polysaccharide production
-
Srivastava, D., Hsieh, M.L., Khataokar, A., Neiditch, M.B., and Waters, C.M. (2013) Cyclic di-GMP inhibits Vibrio cholerae motility by repressing induction of transcription and inducing extracellular polysaccharide production. Mol Microbiol 90: 1262–1276.
-
(2013)
Mol Microbiol
, vol.90
, pp. 1262-1276
-
-
Srivastava, D.1
Hsieh, M.L.2
Khataokar, A.3
Neiditch, M.B.4
Waters, C.M.5
-
44
-
-
46049119425
-
Integration host factor positively regulates virulence gene expression in Vibrio cholerae
-
Stonehouse, E., Kovacikova, G., Taylor, R.K., and Skorupski, K. (2008) Integration host factor positively regulates virulence gene expression in Vibrio cholerae. J Bacteriol 190: 4736–4748.
-
(2008)
J Bacteriol
, vol.190
, pp. 4736-4748
-
-
Stonehouse, E.1
Kovacikova, G.2
Taylor, R.K.3
Skorupski, K.4
-
45
-
-
0027171047
-
Purification and characterization of a poly(dA-dT) lux-specific DNA-binding protein from Vibrio harveyi and identification as LuxR
-
Swartzman, E. and Meighen, E.A. (1993) Purification and characterization of a poly(dA-dT) lux-specific DNA-binding protein from Vibrio harveyi and identification as LuxR. J Biol Chem 268: 16706–16716.
-
(1993)
J Biol Chem
, vol.268
, pp. 16706-16716
-
-
Swartzman, E.1
Meighen, E.A.2
-
46
-
-
0026498606
-
The luxR gene product of Vibrio harveyi is a transcriptional activator of the lux promoter
-
Swartzman, E., Silverman, M., and Meighen, E.A. (1992) The luxR gene product of Vibrio harveyi is a transcriptional activator of the lux promoter. J Bacteriol 174: 7490–7493.
-
(1992)
J Bacteriol
, vol.174
, pp. 7490-7493
-
-
Swartzman, E.1
Silverman, M.2
Meighen, E.A.3
-
47
-
-
77952062419
-
Measurement of the copy number of the master quorum-sensing regulator of a bacterial cell
-
Teng, S.W., Wang, Y., Tu, K.C., Long, T., Mehta, P., Wingreen, N.S., Bassler, B.L., and Ong, N.P. (2010) Measurement of the copy number of the master quorum-sensing regulator of a bacterial cell. Biophys J 98: 2024–2031.
-
(2010)
Biophys J
, vol.98
, pp. 2024-2031
-
-
Teng, S.W.1
Wang, Y.2
Tu, K.C.3
Long, T.4
Mehta, P.5
Wingreen, N.S.6
Bassler, B.L.7
Ong, N.P.8
-
48
-
-
1542346163
-
High-throughput beta-galactosidase assay for bacterial cell-based reporter systems
-
Thibodeau, S.A., Fang, R., and Joung, J.K. (2004) High-throughput beta-galactosidase assay for bacterial cell-based reporter systems. BioTechniques 36: 410–415.
-
(2004)
BioTechniques
, vol.36
, pp. 410-415
-
-
Thibodeau, S.A.1
Fang, R.2
Joung, J.K.3
-
49
-
-
33846508567
-
Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi
-
Tu, K.C. and Bassler, B.L. (2007) Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi. Genes Dev 21: 221–233.
-
(2007)
Genes Dev
, vol.21
, pp. 221-233
-
-
Tu, K.C.1
Bassler, B.L.2
-
50
-
-
84873046241
-
Individual and combined roles of the master regulators AphA and LuxR in control of the Vibrio harveyi quorum-sensing regulon
-
van Kessel, J.C., Rutherford, S.T., Shao, Y., Utria, A.F., and Bassler, B.L. (2013a) Individual and combined roles of the master regulators AphA and LuxR in control of the Vibrio harveyi quorum-sensing regulon. J Bacteriol 195: 436–443.
-
(2013)
J Bacteriol
, vol.195
, pp. 436-443
-
-
van Kessel, J.C.1
Rutherford, S.T.2
Shao, Y.3
Utria, A.F.4
Bassler, B.L.5
-
51
-
-
84883370908
-
Analysis of activator and repressor functions reveals the requirements for transcriptional control by LuxR, the master regulator of quorum sensing in Vibrio harveyi
-
van Kessel, J.C., Ulrich, L.E., Zhulin, I.B., and Bassler, B.L. (2013b) Analysis of activator and repressor functions reveals the requirements for transcriptional control by LuxR, the master regulator of quorum sensing in Vibrio harveyi. mBio 4: e00378–13.
-
(2013)
mBio
, vol.4
, pp. 313-378
-
-
van Kessel, J.C.1
Ulrich, L.E.2
Zhulin, I.B.3
Bassler, B.L.4
-
52
-
-
84928324017
-
Quorum Sensing Regulates the Osmotic Stress Response in Vibrio harveyi
-
van Kessel, J.C., Rutherford, S.T., Cong, J.P., Quinodoz, S., Healy, J., and Bassler, B.L. (2015) Quorum Sensing Regulates the Osmotic Stress Response in Vibrio harveyi. J Bacteriol 197: 73–80.
-
(2015)
J Bacteriol
, vol.197
, pp. 73-80
-
-
van Kessel, J.C.1
Rutherford, S.T.2
Cong, J.P.3
Quinodoz, S.4
Healy, J.5
Bassler, B.L.6
-
53
-
-
27944442272
-
Quorum sensing: cell-to-cell communication in bacteria
-
Waters, C.M. and Bassler, B.L. (2005) Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol 21: 319–346.
-
(2005)
Annu Rev Cell Dev Biol
, vol.21
, pp. 319-346
-
-
Waters, C.M.1
Bassler, B.L.2
-
54
-
-
41549091882
-
Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT
-
Waters, C.M., Lu, W., Rabinowitz, J.D., and Bassler, B.L. (2008) Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT. J Bacteriol 190: 2527–2536.
-
(2008)
J Bacteriol
, vol.190
, pp. 2527-2536
-
-
Waters, C.M.1
Lu, W.2
Rabinowitz, J.D.3
Bassler, B.L.4
-
55
-
-
0027318786
-
Function of IHF in lambda DNA packaging. II. Effects of mutations altering the IHF binding site and the intrinsic bend in cosB on lambda development
-
Xin, W., Cai, Z.H., and Feiss, M. (1993) Function of IHF in lambda DNA packaging. II. Effects of mutations altering the IHF binding site and the intrinsic bend in cosB on lambda development. J Mol Biol 230: 505–515.
-
(1993)
J Mol Biol
, vol.230
, pp. 505-515
-
-
Xin, W.1
Cai, Z.H.2
Feiss, M.3
-
56
-
-
84926409857
-
Quorum sensing positively regulates flagellar motility in pathogenic Vibrio harveyi
-
Yang, Q. and Defoirdt, T. (2015) Quorum sensing positively regulates flagellar motility in pathogenic Vibrio harveyi. Environ Microbiol 17: 960–968.
-
(2015)
Environ Microbiol
, vol.17
, pp. 960-968
-
-
Yang, Q.1
Defoirdt, T.2
|