메뉴 건너뛰기




Volumn 7, Issue , 2016, Pages

Predicting non-small cell lung cancer prognosis by fully automated microscopic pathology image features

Author keywords

[No Author keywords available]

Indexed keywords

CANCER; CELLS AND CELL COMPONENTS; DATABASE; DISEASE PREVALENCE; HISTOPATHOLOGY; IMAGE ANALYSIS; MACHINE LEARNING; RESPIRATORY DISEASE;

EID: 84982218412     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms12474     Document Type: Article
Times cited : (812)

References (55)
  • 1
    • 79952232216 scopus 로고    scopus 로고
    • Global cancer statistics
    • Jemal, A. et al. Global cancer statistics. CA Cancer J. Clin. 61, 69-90 (2011).
    • (2011) CA Cancer J. Clin. , vol.61 , pp. 69-90
    • Jemal, A.1
  • 3
    • 34848895759 scopus 로고    scopus 로고
    • Noninvasive staging of non-small cell lung cancer: ACCP evidenced-based clinical practice guidelines (2nd edition)
    • Silvestri, G. A. et al. Noninvasive staging of non-small cell lung cancer: ACCP evidenced-based clinical practice guidelines (2nd edition). Chest 132, 178S-201S (2007).
    • (2007) Chest , vol.132 , pp. 178S-201S
    • Silvestri, G.A.1
  • 4
    • 79551563284 scopus 로고    scopus 로고
    • International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society International multidisciplinary classification of lung adenocarcinoma
    • Travis, W. D. et al. International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society International multidisciplinary classification of lung adenocarcinoma. J. Thorac. Oncol. 6, 244-285 (2011).
    • (2011) J. Thorac. Oncol. , vol.6 , pp. 244-285
    • Travis, W.D.1
  • 6
    • 77950999338 scopus 로고    scopus 로고
    • Pathologic diagnosis of advanced lung cancer based on small biopsies and cytology: A paradigm shift
    • Travis, W. D. et al. Pathologic diagnosis of advanced lung cancer based on small biopsies and cytology: a paradigm shift. J. Thorac. Oncol. 5, 411-414 (2010).
    • (2010) J. Thorac. Oncol. , vol.5 , pp. 411-414
    • Travis, W.D.1
  • 7
    • 77950974826 scopus 로고    scopus 로고
    • Subtyping of undifferentiated non-small cell carcinomas in bronchial biopsy specimens
    • Loo, P. S., Thomas, S. C., Nicolson, M. C., Fyfe, M. N., Kerr, K. M. Subtyping of undifferentiated non-small cell carcinomas in bronchial biopsy specimens. J. Thorac. Oncol. 5, 442-447 (2010).
    • (2010) J. Thorac. Oncol. , vol.5 , pp. 442-447
    • Loo, P.S.1    Thomas, S.C.2    Nicolson, M.C.3    Fyfe, M.N.4    Kerr, K.M.5
  • 8
    • 77951019161 scopus 로고    scopus 로고
    • Refining the diagnosis and EGFR status of non-small cell lung carcinoma in biopsy and cytologic material, using a panel of mucin staining, TTF-1, cytokeratin 5/6, and P63, and EGFR mutation analysis
    • Nicholson, A. G. et al. Refining the diagnosis and EGFR status of non-small cell lung carcinoma in biopsy and cytologic material, using a panel of mucin staining, TTF-1, cytokeratin 5/6, and P63, and EGFR mutation analysis. J. Thorac. Oncol. 5, 436-441 (2010).
    • (2010) J. Thorac. Oncol. , vol.5 , pp. 436-441
    • Nicholson, A.G.1
  • 9
    • 64049115311 scopus 로고    scopus 로고
    • The differential efficacy of pemetrexed according to NSCLC histology: A review of two phase III studies
    • Scagliotti, G. et al. The differential efficacy of pemetrexed according to NSCLC histology: a review of two phase III studies. Oncologist 14, 253-263 (2009).
    • (2009) Oncologist , vol.14 , pp. 253-263
    • Scagliotti, G.1
  • 10
    • 33845490014 scopus 로고    scopus 로고
    • Paclitaxel-carboplatin alone or with bevacizumab for non-small-cell lung cancer
    • Sandler, A. et al. Paclitaxel-carboplatin alone or with bevacizumab for non-small-cell lung cancer. N. Engl. J. Med. 355, 2542-2550 (2006).
    • (2006) N. Engl. J. Med. , vol.355 , pp. 2542-2550
    • Sandler, A.1
  • 11
    • 84875925170 scopus 로고    scopus 로고
    • New pathologic classification of lung cancer: Relevance for clinical practice and clinical trials
    • Travis, W. D., Brambilla, E., Riely, G. J. New pathologic classification of lung cancer: relevance for clinical practice and clinical trials. J. Clin. Oncol. 31, 992-1001 (2013).
    • (2013) J. Clin. Oncol. , vol.31 , pp. 992-1001
    • Travis, W.D.1    Brambilla, E.2    Riely, G.J.3
  • 12
    • 84982823011 scopus 로고    scopus 로고
    • Omics profiling in precision oncology
    • O116.059253
    • Yu, K. H., Snyder, M. Omics profiling in precision oncology. Mol. Cell. Proteomics 20, O116.059253 (2016).
    • (2016) Mol. Cell. Proteomics , vol.20
    • Yu, K.H.1    Snyder, M.2
  • 14
    • 0028966055 scopus 로고
    • A prognostic model of recurrence and death in stage i non-small cell lung cancer utilizing presentation, histopathology, and oncoprotein expression
    • Harpole, Jr. D. H., Herndon, 2nd J. E., Wolfe, W. G., Iglehart, J. D., Marks, J. R. A prognostic model of recurrence and death in stage I non-small cell lung cancer utilizing presentation, histopathology, and oncoprotein expression. Cancer Res. 55, 51-56 (1995).
    • (1995) Cancer Res. , vol.55 , pp. 51-56
    • Harpole, D.H.1    Herndon, J.E.2    Wolfe, W.G.3    Iglehart, J.D.4    Marks, J.R.5
  • 15
    • 79955571953 scopus 로고    scopus 로고
    • Impact of proposed IASLC/ATS/ERS classification of lung adenocarcinoma: Prognostic subgroups and implications for further revision of staging based on analysis of 514 stage i cases
    • Yoshizawa, A. et al. Impact of proposed IASLC/ATS/ERS classification of lung adenocarcinoma: prognostic subgroups and implications for further revision of staging based on analysis of 514 stage I cases. Mod. Pathol. 24, 653-664 (2011).
    • (2011) Mod. Pathol. , vol.24 , pp. 653-664
    • Yoshizawa, A.1
  • 16
    • 0033999743 scopus 로고    scopus 로고
    • Diagnosis of lung cancer: Pathology of invasive and preinvasive neoplasia
    • Franklin, W. A. Diagnosis of lung cancer: pathology of invasive and preinvasive neoplasia. Chest 117, 80S-89S (2000).
    • (2000) Chest , vol.117 , pp. 80S-89S
    • Franklin, W.A.1
  • 17
    • 84857043356 scopus 로고    scopus 로고
    • Personalized medicine for lung cancer: New challenges for pathology
    • Kerr, K. M. Personalized medicine for lung cancer: new challenges for pathology. Histopathology 60, 531-546 (2012).
    • (2012) Histopathology , vol.60 , pp. 531-546
    • Kerr, K.M.1
  • 18
    • 18544365698 scopus 로고    scopus 로고
    • Gene-expression profiles predict survival of patients with lung adenocarcinoma
    • Beer, D. G. et al. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat. Med. 8, 816-824 (2002).
    • (2002) Nat. Med. , vol.8 , pp. 816-824
    • Beer, D.G.1
  • 19
    • 27644465419 scopus 로고    scopus 로고
    • Two subclasses of lung squamous cell carcinoma with different gene expression profiles and prognosis identified by hierarchical clustering and non-negative matrix factorization
    • Inamura, K. et al. Two subclasses of lung squamous cell carcinoma with different gene expression profiles and prognosis identified by hierarchical clustering and non-negative matrix factorization. Oncogene 24, 7105-7113 (2005).
    • (2005) Oncogene , vol.24 , pp. 7105-7113
    • Inamura, K.1
  • 20
    • 33644759126 scopus 로고    scopus 로고
    • Diagnostic agreement in the histopathological evaluation of lung cancer tissue in a population-based case-control study
    • Stang, A. et al. Diagnostic agreement in the histopathological evaluation of lung cancer tissue in a population-based case-control study. Lung Cancer 52, 29-36 (2006).
    • (2006) Lung Cancer , vol.52 , pp. 29-36
    • Stang, A.1
  • 21
    • 84872047310 scopus 로고    scopus 로고
    • Validation of interobserver agreement in lung cancer assessment: Hematoxylin-eosin diagnostic reproducibility for non-small cell lung cancer: The 2004 World Health Organization classification and therapeutically relevant subsets
    • Grilley-Olson, J. E. et al. Validation of interobserver agreement in lung cancer assessment: hematoxylin-eosin diagnostic reproducibility for non-small cell lung cancer: the 2004 World Health Organization classification and therapeutically relevant subsets. Arch. Pathol. Lab. Med. 137, 32-40 (2013).
    • (2013) Arch. Pathol. Lab. Med. , vol.137 , pp. 32-40
    • Grilley-Olson, J.E.1
  • 22
    • 84860379332 scopus 로고    scopus 로고
    • The novel histologic International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society classification system of lung adenocarcinoma is a stage-independent predictor of survival
    • Warth, A. et al. The novel histologic International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society classification system of lung adenocarcinoma is a stage-independent predictor of survival. J. Clin. Oncol. 30, 1438-1446 (2012).
    • (2012) J. Clin. Oncol. , vol.30 , pp. 1438-1446
    • Warth, A.1
  • 23
    • 84940111611 scopus 로고    scopus 로고
    • Subtype classification of lung adenocarcinoma predicts benefit from adjuvant chemotherapy in patients undergoing complete resection
    • Tsao, M. S. et al. Subtype classification of lung adenocarcinoma predicts benefit from adjuvant chemotherapy in patients undergoing complete resection. J. Clin. Oncol. 33, 3439-3446 (2015).
    • (2015) J. Clin. Oncol. , vol.33 , pp. 3439-3446
    • Tsao, M.S.1
  • 24
    • 84959885965 scopus 로고    scopus 로고
    • Proposal of a prognostically relevant grading scheme for pulmonary squamous cell carcinoma
    • Weichert, W. et al. Proposal of a prognostically relevant grading scheme for pulmonary squamous cell carcinoma. Eur. Respir. J. 47, 938-946 (2015).
    • (2015) Eur. Respir. J. , vol.47 , pp. 938-946
    • Weichert, W.1
  • 25
    • 84905923362 scopus 로고    scopus 로고
    • Comprehensive pathological analyses in lung squamous cell carcinoma: Single cell invasion, nuclear diameter, and tumour budding are independent prognostic factors for worse outcomes
    • Kadota, K. et al. Comprehensive pathological analyses in lung squamous cell carcinoma: single cell invasion, nuclear diameter, and tumour budding are independent prognostic factors for worse outcomes. J. Thorac. Oncol. 9, 1126-1139 (2014).
    • (2014) J. Thorac. Oncol. , vol.9 , pp. 1126-1139
    • Kadota, K.1
  • 26
    • 84868592268 scopus 로고    scopus 로고
    • Interobserver variability in the application of the novel IASLC/ATS/ERS classification for pulmonary adenocarcinomas
    • Warth, A. et al. Interobserver variability in the application of the novel IASLC/ATS/ERS classification for pulmonary adenocarcinomas. Eur. Respir. J. 40, 1221-1227 (2012).
    • (2012) Eur. Respir. J. , vol.40 , pp. 1221-1227
    • Warth, A.1
  • 27
    • 84870536556 scopus 로고    scopus 로고
    • Reproducibility of histopathological subtypes and invasion in pulmonary adenocarcinoma. An international interobserver study
    • Thunnissen, E. et al. Reproducibility of histopathological subtypes and invasion in pulmonary adenocarcinoma. An international interobserver study. Mod. Pathol. 25, 1574-1583 (2012).
    • (2012) Mod. Pathol. , vol.25 , pp. 1574-1583
    • Thunnissen, E.1
  • 28
    • 84867404458 scopus 로고    scopus 로고
    • Training increases concordance in classifying pulmonary adenocarcinomas according to the novel IASLC/ATS/ERS classification
    • Warth, A. et al. Training increases concordance in classifying pulmonary adenocarcinomas according to the novel IASLC/ATS/ERS classification. Virchows Arch. 461, 185-193 (2012).
    • (2012) Virchows Arch. , vol.461 , pp. 185-193
    • Warth, A.1
  • 29
    • 27644513255 scopus 로고    scopus 로고
    • Clinical impact and frequency of anatomic pathology errors in cancer diagnoses
    • Raab, S. S. et al. Clinical impact and frequency of anatomic pathology errors in cancer diagnoses. Cancer 104, 2205-2213 (2005).
    • (2005) Cancer , vol.104 , pp. 2205-2213
    • Raab, S.S.1
  • 30
    • 84855947471 scopus 로고    scopus 로고
    • Computer aided diagnostic tools aim to empower rather than replace pathologists: Lessons learned from computational chess
    • Hipp, J. et al. Computer aided diagnostic tools aim to empower rather than replace pathologists: lessons learned from computational chess. J. Pathol. Inform. 2, 25 (2011).
    • (2011) J. Pathol. Inform. , vol.2 , pp. 25
    • Hipp, J.1
  • 31
    • 81055146760 scopus 로고    scopus 로고
    • Systematic analysis of breast cancer morphology uncovers stromal features associated with survival
    • Beck, A. H. et al. Systematic analysis of breast cancer morphology uncovers stromal features associated with survival. Sci. Transl. Med. 3, 108ra113 (2011).
    • (2011) Sci. Transl. Med. , vol.3 , pp. 108ra113
    • Beck, A.H.1
  • 32
    • 59349090297 scopus 로고    scopus 로고
    • Computer-aided prognosis of neuroblastoma on whole-slide images: Classification of stromal development
    • Sertel, O. et al. Computer-aided prognosis of neuroblastoma on whole-slide images: classification of stromal development. Pattern Recognit. 42, 1093-1103 (2009).
    • (2009) Pattern Recognit. , vol.42 , pp. 1093-1103
    • Sertel, O.1
  • 33
    • 62349141165 scopus 로고    scopus 로고
    • Histopathological image analysis using model-based intermediate representations and color texture: Follicular lymphoma grading
    • Sertel, O. et al. Histopathological image analysis using model-based intermediate representations and color texture: follicular lymphoma grading. J. Signal Process. Syst. 55, 169-183 (2009).
    • (2009) J. Signal Process. Syst. , vol.55 , pp. 169-183
    • Sertel, O.1
  • 34
    • 33751218291 scopus 로고    scopus 로고
    • Computerized morphometry as an aid in determining the grade of dysplasia and progression to adenocarcinoma in Barrett's esophagus
    • Sabo, E. et al. Computerized morphometry as an aid in determining the grade of dysplasia and progression to adenocarcinoma in Barrett's esophagus. Lab. Invest. 86, 1261-1271 (2006).
    • (2006) Lab. Invest. , vol.86 , pp. 1261-1271
    • Sabo, E.1
  • 35
    • 0017808867 scopus 로고
    • The fine structure of large cell undifferentiated carcinoma of the lung. Evidence for its relation to squamous cell carcinomas and adenocarcinomas
    • Churg, A. The fine structure of large cell undifferentiated carcinoma of the lung. Evidence for its relation to squamous cell carcinomas and adenocarcinomas. Hum. Pathol. 9, 143-156 (1978).
    • (1978) Hum. Pathol. , vol.9 , pp. 143-156
    • Churg, A.1
  • 36
    • 84912523937 scopus 로고    scopus 로고
    • Tumour-size-based morphological features of metastatic lymph node tumors from primary lung adenocarcinoma
    • Yamada, E. et al. Tumour-size-based morphological features of metastatic lymph node tumors from primary lung adenocarcinoma. Pathol. Int. 64, 591-600 (2014).
    • (2014) Pathol. Int. , vol.64 , pp. 591-600
    • Yamada, E.1
  • 37
    • 84905029258 scopus 로고    scopus 로고
    • Comprehensive molecular profiling of lung adenocarcinoma
    • Cancer Genome Atlas Research Network
    • Cancer Genome Atlas Research Network. Comprehensive molecular profiling of lung adenocarcinoma. Nature 511, 543-550 (2014).
    • (2014) Nature , vol.511 , pp. 543-550
  • 38
    • 84866894408 scopus 로고    scopus 로고
    • Comprehensive genomic characterization of squamous cell lung cancers
    • Cancer Genome Atlas Research Network
    • Cancer Genome Atlas Research Network. Comprehensive genomic characterization of squamous cell lung cancers. Nature 489, 519-525 (2012).
    • (2012) Nature , vol.489 , pp. 519-525
  • 39
    • 77953153778 scopus 로고    scopus 로고
    • Metadata matters: Access to image data in the real world
    • Linkert, M. et al. Metadata matters: access to image data in the real world. J. Cell Biol. 189, 777-782 (2010).
    • (2010) J. Cell Biol. , vol.189 , pp. 777-782
    • Linkert, M.1
  • 40
    • 38549107989 scopus 로고    scopus 로고
    • The Stanford Tissue Microarray database
    • Marinelli, R. J. et al. The Stanford Tissue Microarray database. Nucleic Acids Res. 36, D871-D877 (2008).
    • (2008) Nucleic Acids Res. , vol.36 , pp. D871-D877
    • Marinelli, R.J.1
  • 41
    • 49349108623 scopus 로고
    • A threshold selection method from gray-level histograms
    • Otsu, N. A threshold selection method from gray-level histograms. Automatica 11, 23-27 (1975).
    • (1975) Automatica , vol.11 , pp. 23-27
    • Otsu, N.1
  • 42
    • 33845792555 scopus 로고    scopus 로고
    • CellProfiler: Image analysis software for identifying and quantifying cell phenotypes
    • Carpenter, A. E. et al. CellProfiler: image analysis software for identifying and quantifying cell phenotypes. Genome Biol. 7, R100 (2006).
    • (2006) Genome Biol. , vol.7 , pp. R100
    • Carpenter, A.E.1
  • 43
    • 79954500285 scopus 로고    scopus 로고
    • Improved structure, function and compatibility for CellProfiler: Modular high-throughput image analysis software
    • Kamentsky, L. et al. Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software. Bioinformatics 27, 1179-1180 (2011).
    • (2011) Bioinformatics , vol.27 , pp. 1179-1180
    • Kamentsky, L.1
  • 45
    • 0345040873 scopus 로고    scopus 로고
    • Classification and Regression by randomForest
    • Liaw, A., Wiener, M. Classification and Regression by randomForest. R News 2, 18-22 (2002).
    • (2002) R News , vol.2 , pp. 18-22
    • Liaw, A.1    Wiener, M.2
  • 46
    • 79952934063 scopus 로고    scopus 로고
    • Regularization paths for Cox's proportional hazards model via coordinate descent
    • Simon, N., Friedman, J., Hastie, T., Tibshirani, R. Regularization paths for Cox's proportional hazards model via coordinate descent. J. Stat. Softw. 39, 1-13 (2011).
    • (2011) J. Stat. Softw. , vol.39 , pp. 1-13
    • Simon, N.1    Friedman, J.2    Hastie, T.3    Tibshirani, R.4
  • 47
    • 80052324279 scopus 로고    scopus 로고
    • Computational pathology: Challenges and promises for tissue analysis
    • Fuchs, T. J., Buhmann, J. M. Computational pathology: challenges and promises for tissue analysis. Comput. Med. Imag. Grap. 35, 515-530 (2011).
    • (2011) Comput. Med. Imag. Grap. , vol.35 , pp. 515-530
    • Fuchs, T.J.1    Buhmann, J.M.2
  • 48
    • 70349376330 scopus 로고    scopus 로고
    • Molecular predictive and prognostic markers in non-small-cell lung cancer
    • Coate, L. E., John, T., Tsao, M. S., Shepherd, F. A. Molecular predictive and prognostic markers in non-small-cell lung cancer. Lancet Oncol. 10, 1001-1010 (2009).
    • (2009) Lancet Oncol. , vol.10 , pp. 1001-1010
    • Coate, L.E.1    John, T.2    Tsao, M.S.3    Shepherd, F.A.4
  • 49
  • 50
    • 84862994926 scopus 로고    scopus 로고
    • FoxQ1 overexpression influences poor prognosis in non-small cell lung cancer, associates with the phenomenon of EMT
    • Feng, J. et al. FoxQ1 overexpression influences poor prognosis in non-small cell lung cancer, associates with the phenomenon of EMT. PloS One 7, e39937 (2012).
    • (2012) PloS One , vol.7 , pp. e39937
    • Feng, J.1
  • 51
    • 77956901783 scopus 로고    scopus 로고
    • Detection of follicles from IHC-stained slides of follicular lymphoma using iterative watershed
    • Samsi, S., Lozanski, G., Shana'ah, A., Krishanmurthy, A. K., Gurcan, M. N. Detection of follicles from IHC-stained slides of follicular lymphoma using iterative watershed. IEEE Trans. Biomed. Eng. 57, 2609-2612 (2010).
    • (2010) IEEE Trans. Biomed. Eng. , vol.57 , pp. 2609-2612
    • Samsi, S.1    Lozanski, G.2    Shanaah, A.3    Krishanmurthy, A.K.4    Gurcan, M.N.5
  • 53
    • 34249753618 scopus 로고
    • Support-vector networks
    • Cortes, C., Vapnik, V. Support-vector networks. Mach. Learn. 20, 273-297 (1995).
    • (1995) Mach. Learn. , vol.20 , pp. 273-297
    • Cortes, C.1    Vapnik, V.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.