Automatic Detection of Answers to Research Questions from Medline Abstracts

ACL-IJCNLP 2015 - BioNLP 2015: Workshop on Biomedical Natural Language Processing, Proceedings of the Workshop

Volumn , Issue , 2015, Pages 141-146

  Alamri, Abdulaziz ^a   Stevenson, Mark ^a  

^a UNIVERSITY OF SHEFFIELD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTATIONAL LINGUISTICS; QUERY PROCESSING; SEARCH ENGINES;

ACCESS MECHANISM; AUTOMATIC DETECTION; MEDLINE; RESEARCH QUESTIONS;

ABSTRACTING;

EID: 84980040229     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (20)

1. Shashank Agarwal and Hong Yu. 2009. Automatically classifying sentences in full-text biomedical articles into introduction, methods, results and discussion. Bioinformatics, 25(23):3174-3180, Dec.
2. Marie-Catherine de Marneffe and Christopher D. Manning. 2008. The stanford typed dependencies representation. In Coling 2008: Proceedings of the workshop on Cross-Framework and Cross-Domain Parser Evaluation, CrossParser'08, pages 1-8, Stroudsburg, PA, USA. Association for Computational Linguistics.
3. David Gough, Sandy Oliver, and James Thomas. 2012. An introduction to systematic reviews. Sage Publications.
4. Mark Hall, Eibe Frank, Geoffrey Holmes, Bernhard Pfahringer, Peter Reutemann, and Ian H. Witten. 2009. The weka data mining software: an update. SIGKDD Explor. Newsl., 11(1):10-18.
5. Kenji Hirohata, Naoaki Okazaki, Sophia Ananiadou, and Mitsuru Ishizuka. 2008. Identifying sections in scientific abstracts using conditional random fields. In In Proc. of the IJCNLP 2008.
6. Antonio J. Jimeno-Yepes, J Caitlin Sticco, James G. Mork, and Alan R. Aronson. 2013. Generif indexing: sentence selection based on machine learning. BMC Bioinformatics, 14:171.
7. Ryan T.K. Lin, Hong-Jei Dai, Yue-Yang Bow, Min-Yuh Day, Richard Tzong-Han Tsai, and Wen-Lian Hsu. 2008. Result identification for biomedical abstracts using conditional random fields. In Information Reuse and Integration, 2008. IRI 2008. IEEE International Conference on, pages 122-126.
8. Ryan T. K. Lin, Hong-Jie Dai, Yue-Yang Bow, Justing Lian-Te Chiu, and Richardg Tzon-Han Tsai. 2009. Using conditional random fields for result identification in biomedical abstracts. Integr. Comput.-Aided Eng., 16(4):339-352, December.
9. Naoaki Okazaki. 2007. Crfsuite: a fast implementation of conditional random fields (crfs). http://www.chokkan.org/software/crfsuite/.
10. Constantin Orasan. 2001. Patterns in scientific abstracts. In In Proceedings of Corpus Linguistics 2001 Conference, pages 433-443. Lancaster University.
11. S. Otani and Y. Tomiura. 2014. Extraction of key expressions indicating the important sentence from article abstracts. In Advanced Applied Informatics (IIAIAAI), 2014 IIAI 3rd International Conference on, pages 216-219.
12. Ross Quinlan. 1993. C4.5: Programs for Machine Learning. Morgan Kaufmann Publishers, San Mateo, CA.
13. Anna M. Ripple, James G. Mork, John M. Rozier, and Lou S. Knecht. 2012. Structured abstracts in med-line: Twenty-five years later.
14. Patrick Ruch, Clia Boyer, Christine Chichester, Imad Tbahriti, Antoine Geissbhler, Paul Fabry, Julien Gobeill, Violaine Pillet, Dietrich Rebholz-Schuhmann, Christian Lovis, and Anne-Lise Veuthey. 2007. Using argumentation to extract key sentences from biomedical abstracts. I. J. Medical Informatics, 76(2-3):195-200.
15. A.S. Schwartz and M.A. Hearst. 2003. A simple algorithm for identifying abbreviation definitions in biomedical text. In In Proceedings of Pacic Symposium on Biocomputing, volume 4, pages 451-462, November.
16. Simone Teufel and Marc Moens. 2002. Summarizing scientific articles: Experiments with relevance and rhetorical status. Comput. Linguist., 28(4):409-445.
17. Peter D. Turney. 2002. Thumbs up or thumbs down?: Semantic orientation applied to unsupervised classification of reviews. In Proceedings of the 40th Annual Meeting on Association for Computational Linguistics, ACL'02, pages 417-424, Stroudsburg, PA, USA. Association for Computational Linguistics.
18. David L. Wheeler, Tanya Barrett, Dennis A. Benson, Stephen H. Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M. Church, Michael Dicuccio, Ron Edgar, Scott Federhen, Lewis Y. Geer, Yuri Kapustin, Oleg Khovayko, David L, David J. Lip-man, Thomas L. Madden, Donna R. Maglott, James Ostell, Vadim Miller, Kim D. Pruitt, Gregory D. Schuler, Edwin Sequeira, Steven T. Sherry, Karl Sirotkin, Re Souvorov, Grigory Starchenko, Roman L. Tatusov, Tatiana A. Tatusova, Lukas Wagner, and Eugene Yaschenko. 2008. Database resources of the national center for biotechnology information. Nucleic Acids Res, pages 13-21.
19. Thomas H. Wonnacott and Ronald J. Wonnacott. 1990. Introductory Statistics. John Wiley and Sons, fifth edition edition.
20. Hong Yu and Vasileios Hatzivassiloglou. 2003. Towards answering opinion questions: Separating facts from opinions and identifying the polarity of opinion sentences. In Proceedings of the Conference on Empirical Methods in Natural Language Processing (EMNLP).