MitoAge: A database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity

Nucleic Acids Research

Volumn 44, Issue D1, 2016, Pages D1262-D1265

  Toren, Dmitri ^a   Barzilay, Thomer ^a   Tacutu, Robi ^a   Lehmann, Gilad ^a,b   Muradian, Khachik K ^c   Fraifeld, Vadim E ^a  

^a BEN GURION UNIVERSITY OF THE NEGEV   (Israel)

^b TECHNION ISRAEL INSTITUTE OF TECHNOLOGY   (Israel)

^c INSTITUTE OF GERONTOLOGY   (Ukraine)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; MITOCHONDRIAL DNA; PROTEIN; RIBOSOME RNA; TRANSFER RNA;

ANIMAL; ARTICLE; CODON USAGE; COMPARATIVE STUDY; CONTROLLED STUDY; GENE; GENETIC CODE; LIFESPAN; LONGEVITY; MITOAGE DATABASE; MITOCHONDRIAL GENOME; NONHUMAN; NUCLEIC ACID DATABASE; PRIORITY JOURNAL; CHEMISTRY; GENETICS;

ANIMALS; DATABASES, NUCLEIC ACID; DNA, MITOCHONDRIAL; GENOME, MITOCHONDRIAL; LONGEVITY;

EID: 84979518882     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkv1187     Document Type: Article

References (20)

1. Wallace, D.C. (2005) A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine. Annu. Rev. Genet., 39, 359-407.
2. Lopez-Otin, C., Blasco, M.A., Partridge, L., Serrano, M. and Kroemer, G. (2013) The hallmarks of aging. Cell, 153, 1194-1217.
3. Apostolova, N., Blas-Garcia, A. and Esplugues, J.V. (2011) Mitochondria sentencing about cellular life and death: a matter of oxidative stress. Curr. Pharm. Des., 17, 4047-4060.
4. Lehmann, G., Segal, E., Muradian, K.K. and Fraifeld, V.E. (2008) Do mitochondrial DNA and metabolic rate complement each other in determination of the mammalian maximum longevity? Rejuvenation Res., 11, 409-417.
5. Sevini, F., Giuliani, C., Vianello, D., Giampieri, E., Santoro, A., Biondi, F., Garagnani, P., Passarino, G., Luiselli, D., Capri, M. et al. (2014) mtDNA mutations in human aging and longevity: controversies and new perspectives opened by high-throughput technologies. Exp. Gerontol., 56, 234-244.
6. Khrapko, K. and Turnbull, D. (2014) Mitochondrial DNA mutations in aging. Prog. Mol. Biol. Transl. Sci., 127, 29-62.
7. Clayton, D.A. (2000) Transcription and replication of mitochondrial DNA. Hum. Reprod., 15(Suppl. 2), 11-17.
8. Fernandez-Silva, P., Enriquez, J.A. and Montoya, J. (2003) Replication and transcription of mammalian mitochondrial DNA. Exp. Physiol., 88, 41-56.
9. Tacutu, R., Craig, T., Budovsky, A., Wuttke, D., Lehmann, G., Taranukha, D., Costa, J., Fraifeld, V.E. and de Magalhaes, J.P. (2013) Human Ageing Genomic Resources: integrated databases and tools for the biology and genetics of ageing. Nucleic Acids Res., 41, D1027-D1033.
10. Saccone, C., Gissi, C., Reyes, A., Larizza, A., Sbisa, E. and Pesole, G. (2002) Mitochondrial DNA in metazoa: degree of freedom in a frozen event. Gene, 286, 3-12.
11. Gonzalez-Freire, M., de Cabo, R., Bernier, M., Sollott, S.J., Fabbri, E., Navas, P. and Ferrucci, L. (2015) Reconsidering the Role of Mitochondria in Aging. J. Gerontol. A Biol. Sci. Med. Sci., 70, 1334-1342.
12. Kraytsberg, Y., Simon, D.K., Turnbull, D.M. and Khrapko, K. (2009) Do mtDNA deletions drive premature aging in mtDNA mutator mice? Aging Cell, 8, 502-506.
13. Lehmann, G., Muradian, K.K. and Fraifeld, V.E. (2013) Telomere length and body temperature-independent determinants of mammalian longevity? Front. Genet., 4, 111.
14. Samuels, D.C. (2005) Life span is related to the free energy of mitochondrial DNA. Mech. Ageing Dev., 126, 1123-1129.
15. Samuels, D.C. (2004) Mitochondrial DNA repeats constrain the life span of mammals. Trends Genet., 20, 226-229.
16. Galtier, N., Blier, P.U. and Nabholz, B. (2009) Inverse relationship between longevity and evolutionary rate of mitochondrial proteins in mammals and birds. Mitochondrion, 9, 51-57.
17. Lehmann, G., Budovsky, A., Muradian, K.K. and Fraifeld, V.E. (2006) Mitochondrial genome anatomy and species-specific lifespan. Rejuvenation Res., 9, 223-226.
18. Yang, J.N., Seluanov, A. and Gorbunova, V. (2013) Mitochondrial inverted repeats strongly correlate with lifespan: mtDNA inversions and aging. PLoS One, 8, e73318.
19. Tatusova, T., Ciufo, S., Federhen, S., Fedorov, B., McVeigh, R., O'Neill, K., Tolstoy, I. and Zaslavsky, L. (2015) Update on RefSeq microbial genomes resources. Nucleic Acids Res., 43, D599-D605.
20. Reyes, A., Gissi, C., Pesole, G. and Saccone, C. (1998) Asymmetrical directional mutation pressure in the mitochondrial genome of mammals. Mol. Biol. Evol., 15, 957-966.