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Volumn 18, Issue 7, 2016, Pages 678-685

Molecular diagnostic experience of whole-exome sequencing in adult patients

Author keywords

adult patients; whole exome sequencing

Indexed keywords

ADULT; AFRICAN AMERICAN; AGE; AGED; ALLELE; AMYOTROPHIC LATERAL SCLEROSIS; ARTICLE; AUTOSOMAL DOMINANT DISORDER; AUTOSOMAL DOMINANT INHERITANCE; AUTOSOMAL RECESSIVE DISORDER; BONE DISEASE; CAUCASIAN; CHROMOSOME 9; CHROMOSOME XQ; CONSANGUINITY; COPY NUMBER VARIATION; DE LANGE SYNDROME; DIAGNOSTIC VALUE; FAMILY HISTORY; FEMALE; GENE DELETION; GENE MUTATION; GENE SEQUENCE; GENETIC DISORDER; GENETIC VARIABILITY; GROWTH DISORDER; HAPPY PUPPET SYNDROME; HEAD AND NECK DISEASE; HISPANIC; HUMAN; INTELLECTUAL IMPAIRMENT; MAJOR CLINICAL STUDY; MALE; MIDDLE AGED; MISSENSE MUTATION; MITOCHONDRIAL GENOME; MOLECULAR DIAGNOSIS; MOSAICISM; MOTOR DYSFUNCTION; NERVOUS SYSTEM MALFORMATION; NONSENSE MUTATION; PHENOTYPE; RETROSPECTIVE STUDY; SEIZURE; SINGLE NUCLEOTIDE POLYMORPHISM; SPEECH DELAY; UNIPARENTAL DISOMY; VERY ELDERLY; WHOLE EXOME SEQUENCING; EXOME; GENETIC DISEASES, INBORN; GENETIC PREDISPOSITION; GENETIC SCREENING; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN GENOME; MOLECULAR PATHOLOGY; PROCEDURES;

EID: 84977147369     PISSN: 10983600     EISSN: 15300366     Source Type: Journal    
DOI: 10.1038/gim.2015.142     Document Type: Article
Times cited : (185)

References (40)
  • 1
    • 42249087308 scopus 로고    scopus 로고
    • The complete genome of an individual by massively parallel DNA sequencing
    • Wheeler DA, Srinivasan M, Egholm M, et al. The complete genome of an individual by massively parallel DNA sequencing. Nature 2008;452:872-876
    • (2008) Nature , vol.452 , pp. 872-876
    • Wheeler, D.A.1    Srinivasan, M.2    Egholm, M.3
  • 2
    • 35648976118 scopus 로고    scopus 로고
    • The diploid genome sequence of an individual human
    • Levy S, Sutton G, Ng PC, et al. The diploid genome sequence of an individual human. PLoS Biol 2007;5:e254
    • (2007) PLoS Biol , vol.5 , pp. e254
    • Levy, S.1    Sutton, G.2    Ng, P.C.3
  • 3
    • 35748951614 scopus 로고    scopus 로고
    • Direct selection of human genomic loci by microarray hybridization
    • Albert TJ, Molla MN, Muzny DM, et al. Direct selection of human genomic loci by microarray hybridization. Nat Methods 2007;4:903-905
    • (2007) Nat Methods , vol.4 , pp. 903-905
    • Albert, T.J.1    Molla, M.N.2    Muzny, D.M.3
  • 4
    • 77953565946 scopus 로고    scopus 로고
    • Whole exome capture in solution with 3 Gbp of data
    • Bainbridge MN, Wang M, Burgess DL, et al. Whole exome capture in solution with 3 Gbp of data. Genome Biol 2010;11:R62
    • (2010) Genome Biol , vol.11 , pp. R62
    • Bainbridge, M.N.1    Wang, M.2    Burgess, D.L.3
  • 5
    • 77950475726 scopus 로고    scopus 로고
    • Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy
    • Lupski JR, Reid JG, Gonzaga-Jauregui C, et al. Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy. N Engl J Med 2010;362: 1181-1191
    • (2010) N Engl J Med , vol.362 , pp. 1181-1191
    • Lupski, J.R.1    Reid, J.G.2    Gonzaga-Jauregui, C.3
  • 6
    • 84856431125 scopus 로고    scopus 로고
    • Mutations in kelch-like 3 and cullin 3 cause hypertension and electrolyte abnormalities
    • Boyden LM, Choi M, Choate KA, et al. Mutations in kelch-like 3 and cullin 3 cause hypertension and electrolyte abnormalities. Nature 2012;482:98-102
    • (2012) Nature , vol.482 , pp. 98-102
    • Boyden, L.M.1    Choi, M.2    Choate, K.A.3
  • 7
    • 79251645624 scopus 로고    scopus 로고
    • Making a definitive diagnosis: Successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease
    • Worthey EA, Mayer AN, Syverson GD, et al. Making a definitive diagnosis: successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease. Genet Med 2011;13:255-262
    • (2011) Genet Med , vol.13 , pp. 255-262
    • Worthey, E.A.1    Mayer, A.N.2    Syverson, G.D.3
  • 8
    • 84918793267 scopus 로고    scopus 로고
    • The usefulness of whole-exome sequencing in routine clinical practice
    • Iglesias A, Anyane-Yeboa K, Wynn J, et al. The usefulness of whole-exome sequencing in routine clinical practice. Genet Med 2014;16:922-931
    • (2014) Genet Med , vol.16 , pp. 922-931
    • Iglesias, A.1    Anyane-Yeboa, K.2    Wynn, J.3
  • 9
    • 84897420283 scopus 로고    scopus 로고
    • Baylor-Hopkins Center for Mendelian Genomics Heterozygous de novo and inherited mutations in the smooth muscle actin (ACTG2) gene underlie megacystis-microcolon-intestinal hypoperistalsis syndrome
    • Wangler MF, Gonzaga-Jauregui C, Gambin T, et al.; Baylor-Hopkins Center for Mendelian Genomics. Heterozygous de novo and inherited mutations in the smooth muscle actin (ACTG2) gene underlie megacystis-microcolon-intestinal hypoperistalsis syndrome. PLoS Genet 2014;10:e1004258
    • (2014) PLoS Genet , vol.10 , pp. e1004258
    • Wangler, M.F.1    Gonzaga-Jauregui, C.2    Gambin, T.3
  • 10
    • 84930332837 scopus 로고    scopus 로고
    • Clinical utility of genetic and genomic services: A position statement of the American College of Medical Genetics and Genomics
    • ACMG Board of Directors
    • ACMG Board of Directors. Clinical utility of genetic and genomic services: a position statement of the American College of Medical Genetics and Genomics. Genet Med 2015;17:505-507
    • (2015) Genet Med , vol.17 , pp. 505-507
  • 11
    • 84918771753 scopus 로고    scopus 로고
    • Molecular findings among patients referred for clinical whole-exome sequencing
    • Yang Y, Muzny DM, Xia F, et al. Molecular findings among patients referred for clinical whole-exome sequencing. JAMA 2014;312:1870-1879
    • (2014) JAMA , vol.312 , pp. 1870-1879
    • Yang, Y.1    Muzny, D.M.2    Xia, F.3
  • 12
    • 84885785987 scopus 로고    scopus 로고
    • Clinical whole-exome sequencing for the diagnosis of mendelian disorders
    • Yang Y, Muzny DM, Reid JG, et al. Clinical whole-exome sequencing for the diagnosis of mendelian disorders. N Engl J Med 2013;369:1502-1511
    • (2013) N Engl J Med , vol.369 , pp. 1502-1511
    • Yang, Y.1    Muzny, D.M.2    Reid, J.G.3
  • 13
    • 84873275502 scopus 로고    scopus 로고
    • De novo truncating mutations in ASXL3 are associated with a novel clinical phenotype with similarities to Bohring-Opitz syndrome
    • Bainbridge MN, Hu H, Muzny DM, et al. De novo truncating mutations in ASXL3 are associated with a novel clinical phenotype with similarities to Bohring-Opitz syndrome. Genome Med 2013;5:11
    • (2013) Genome Med , vol.5 , pp. 11
    • Bainbridge, M.N.1    Hu, H.2    Muzny, D.M.3
  • 14
    • 84939635642 scopus 로고    scopus 로고
    • Enhanced utility of familycentered diagnostic exome sequencing with inheritance model-based analysis: Results from 500 unselected families with undiagnosed genetic conditions
    • Farwell KD, Shahmirzadi L, El-Khechen D, et al. Enhanced utility of familycentered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions. Genet Med 2015;17:578-586
    • (2015) Genet Med , vol.17 , pp. 578-586
    • Farwell, K.D.1    Shahmirzadi, L.2    El-Khechen, D.3
  • 15
    • 84918840439 scopus 로고    scopus 로고
    • Clinical exome sequencing for genetic identification of rare Mendelian disorders
    • Lee H, Deignan JL, Dorrani N, et al. Clinical exome sequencing for genetic identification of rare Mendelian disorders. JAMA 2014;312:1880-1887
    • (2014) JAMA , vol.312 , pp. 1880-1887
    • Lee, H.1    Deignan, J.L.2    Dorrani, N.3
  • 16
    • 78049250010 scopus 로고    scopus 로고
    • A novel mutation c 4003 G>C in the CREBBP gene in an adult female with Rubinstein-Taybi syndrome presenting with subtle dysmorphic features
    • Li C, Szybowska M. A novel mutation c.4003 G>C in the CREBBP gene in an adult female with Rubinstein-Taybi syndrome presenting with subtle dysmorphic features. Am J Med Genet A 2010;152A:2939-2941
    • (2010) Am J Med Genet A , vol.152 A , pp. 2939-2941
    • Li, C.1    Szybowska, M.2
  • 17
    • 84902155842 scopus 로고    scopus 로고
    • Clinical utility of wholeexome sequencing in rare diseases: Galactosialidosis
    • Prada CE, Gonzaga-Jauregui C, Tannenbaum R, et al. Clinical utility of wholeexome sequencing in rare diseases: Galactosialidosis. Eur J Med Genet 2014;57:339-344
    • (2014) Eur J Med Genet , vol.57 , pp. 339-344
    • Prada, C.E.1    Gonzaga-Jauregui, C.2    Tannenbaum, R.3
  • 18
    • 84941332755 scopus 로고    scopus 로고
    • Whole exome sequencing identifies an adult-onset case of methylmalonic aciduria and homocystinuria type C (cblC) with non-syndromic bull's eye maculopathy
    • Collison FT, Xie YA, Gambin T, et al. Whole exome sequencing identifies an adult-onset case of methylmalonic aciduria and homocystinuria type C (cblC) with non-syndromic bull's eye maculopathy. Ophthalmic Genet 2015;36: 270-275
    • (2015) Ophthalmic Genet , vol.36 , pp. 270-275
    • Collison, F.T.1    Xie, Y.A.2    Gambin, T.3
  • 21
    • 79960572198 scopus 로고    scopus 로고
    • Targeted enrichment beyond the consensus coding DNA sequence exome reveals exons with higher variant densities
    • Bainbridge MN, Wang M, Wu Y, et al. Targeted enrichment beyond the consensus coding DNA sequence exome reveals exons with higher variant densities. Genome Biol 2011;12:R68
    • (2011) Genome Biol , vol.12 , pp. R68
    • Bainbridge, M.N.1    Wang, M.2    Wu, Y.3
  • 22
    • 42149139456 scopus 로고    scopus 로고
    • Molecular Subcommittee of the ACMG Laboratory Quality Assurance Committee ACMG recommendations for standards for interpretation and reporting of sequence variations: Revisions
    • Richards CS, Bale S, Bellissimo DB, et al.; Molecular Subcommittee of the ACMG Laboratory Quality Assurance Committee. ACMG recommendations for standards for interpretation and reporting of sequence variations: Revisions 2007. Genet Med 2008;10:294-300
    • (2007) Genet Med , vol.10 , pp. 294-300
    • Richards, C.S.1    Bale, S.2    Bellissimo, D.B.3
  • 23
    • 84891749517 scopus 로고    scopus 로고
    • The Human Phenotype Ontology project: Linking molecular biology and disease through phenotype data
    • Köhler S, Doelken SC, Mungall CJ, et al. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data. Nucleic Acids Res 2014;42(Database issue):D966-D974
    • (2014) Nucleic Acids Res , vol.42 , pp. D966-D974
    • Köhler, S.1    Doelken, S.C.2    Mungall, C.J.3
  • 24
    • 84880535720 scopus 로고    scopus 로고
    • American College of Medical Genetics and Genomics ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing
    • Green RC, Berg JS, Grody WW, et al.; American College of Medical Genetics and Genomics. ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing. Genet Med 2013;15:565-574
    • (2013) Genet Med , vol.15 , pp. 565-574
    • Green, R.C.1    Berg, J.S.2    Grody, W.W.3
  • 25
    • 38049150175 scopus 로고    scopus 로고
    • Missense mutations in desmocollin-2 N-terminus, associated with arrhythmogenic right ventricular cardiomyopathy, affect intracellular localization of desmocollin-2 in vitro
    • Beffagna G, De Bortoli M, Nava A, et al. Missense mutations in desmocollin-2 N-terminus, associated with arrhythmogenic right ventricular cardiomyopathy, affect intracellular localization of desmocollin-2 in vitro. BMC Med Genet 2007;8:65
    • (2007) BMC Med Genet , vol.8 , pp. 65
    • Beffagna, G.1    De Bortoli, M.2    Nava, A.3
  • 26
    • 38149050660 scopus 로고    scopus 로고
    • Carrier screening in individuals of Ashkenazi Jewish descent
    • Gross SJ, Pletcher BA, Monaghan KG; Professional Practice and Guidelines Committee. Carrier screening in individuals of Ashkenazi Jewish descent. Genet Med 2008;10:54-56
    • (2008) Genet Med , vol.10 , pp. 54-56
    • Gross, S.J.1    Pletcher, B.A.2    Monaghan, K.G.3    Practice, P.4
  • 27
    • 79955483667 scopus 로고    scopus 로고
    • A framework for variation discovery and genotyping using next-generation DNA sequencing data
    • DePristo MA, Banks E, Poplin R, et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat Genet 2011;43:491-498
    • (2011) Nat Genet , vol.43 , pp. 491-498
    • DePristo, M.A.1    Banks, E.2    Poplin, R.3
  • 28
    • 84928209346 scopus 로고    scopus 로고
    • Standards and guidelines for the interpretation of sequence variants: A joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
    • Richards S, Aziz N, Bale S, et al. Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med 2015;17:405-424
    • (2015) Genet Med , vol.17 , pp. 405-424
    • Richards, S.1    Aziz, N.2    Bale, S.3
  • 30
    • 80053549439 scopus 로고    scopus 로고
    • Clan genomics and the complex architecture of human disease
    • Lupski JR, Belmont JW, Boerwinkle E, Gibbs RA. Clan genomics and the complex architecture of human disease. Cell 2011;147:32-43
    • (2011) Cell , vol.147 , pp. 32-43
    • Lupski, J.R.1    Belmont, J.W.2    Boerwinkle, E.3    Gibbs, R.A.4
  • 31
    • 84868686559 scopus 로고    scopus 로고
    • Diagnostic exome sequencing in persons with severe intellectual disability
    • de Ligt J, Willemsen MH, van Bon BW, et al. Diagnostic exome sequencing in persons with severe intellectual disability. N Engl J Med 2012;367: 1921-1929
    • (2012) N Engl J Med , vol.367 , pp. 1921-1929
    • De Ligt, J.1    Willemsen, M.H.2    Van Bon, B.W.3
  • 32
    • 84868543309 scopus 로고    scopus 로고
    • Range of genetic mutations associated with severe non-syndromic sporadic intellectual disability: An exome sequencing study
    • Rauch A, Wieczorek D, Graf E, et al. Range of genetic mutations associated with severe non-syndromic sporadic intellectual disability: an exome sequencing study. Lancet 2012;380:1674-1682
    • (2012) Lancet , vol.380 , pp. 1674-1682
    • Rauch, A.1    Wieczorek, D.2    Graf, E.3
  • 33
    • 84926522440 scopus 로고    scopus 로고
    • DDD study Genetic diagnosis of developmental disorders in the DDD study: A scalable analysis of genome-wide research data
    • Wright CF, Fitzgerald TW, Jones WD, et al.; DDD study. Genetic diagnosis of developmental disorders in the DDD study: a scalable analysis of genome-wide research data. Lancet 2015;385:1305-1314
    • (2015) Lancet , vol.385 , pp. 1305-1314
    • Wright, C.F.1    Fitzgerald, T.W.2    Jones, W.D.3
  • 34
    • 84923371368 scopus 로고    scopus 로고
    • The allelic spectrum of Charcot-Marie-Tooth disease in over 17,000 individuals with neuropathy
    • DiVincenzo C, Elzinga CD, Medeiros AC, et al. The allelic spectrum of Charcot-Marie-Tooth disease in over 17,000 individuals with neuropathy. Mol Genet Genomic Med 2014;2:522-529
    • (2014) Mol Genet Genomic Med , vol.2 , pp. 522-529
    • DiVincenzo, C.1    Elzinga, C.D.2    Medeiros, A.C.3
  • 35
    • 84866919087 scopus 로고    scopus 로고
    • Consortium for Clinical Investigation of Neurologic Channelopathies Mexiletine for symptoms and signs of myotonia in nondystrophic myotonia: A randomized controlled trial
    • Statland JM, Bundy BN, Wang Y, et al.; Consortium for Clinical Investigation of Neurologic Channelopathies. Mexiletine for symptoms and signs of myotonia in nondystrophic myotonia: a randomized controlled trial. JAMA 2012;308: 1357-1365
    • (2012) JAMA , vol.308 , pp. 1357-1365
    • Statland, J.M.1    Bundy, B.N.2    Wang, Y.3
  • 36
    • 27844571985 scopus 로고    scopus 로고
    • Kufor Rakeb disease: Autosomal recessive, levodopa-responsive parkinsonism with pyramidal degeneration, supranuclear gaze palsy, and dementia
    • Williams DR, Hadeed A, al-Din AS, Wreikat AL, Lees AJ. Kufor Rakeb disease: autosomal recessive, levodopa-responsive parkinsonism with pyramidal degeneration, supranuclear gaze palsy, and dementia. Mov Disord 2005;20:1264-1271
    • (2005) Mov Disord , vol.20 , pp. 1264-1271
    • Williams, D.R.1    Hadeed, A.2    Al-Din, A.S.3    Wreikat, A.L.4    Lees, A.J.5
  • 37
    • 84880423883 scopus 로고    scopus 로고
    • Reporting genomic sequencing results to ordering clinicians: Incidental, but not exceptional
    • Green RC, Lupski JR, Biesecker LG. Reporting genomic sequencing results to ordering clinicians: incidental, but not exceptional. JAMA 2013;310:365-366
    • (2013) JAMA , vol.310 , pp. 365-366
    • Green, R.C.1    Lupski, J.R.2    Biesecker, L.G.3
  • 38
    • 84941652552 scopus 로고    scopus 로고
    • The cost-effectiveness of returning incidental findings from next-generation genomic sequencing
    • Bennette CS, Gallego CJ, Burke W, Jarvik GP, Veenstra DL. The cost-effectiveness of returning incidental findings from next-generation genomic sequencing. Genet Med 2015;17:587-595
    • (2015) Genet Med , vol.17 , pp. 587-595
    • Bennette, C.S.1    Gallego, C.J.2    Burke, W.3    Jarvik, G.P.4    Veenstra, D.L.5
  • 39
    • 84923872701 scopus 로고    scopus 로고
    • Actionable exomic incidental findings in 6503 participants: Challenges of variant classification
    • Amendola LM, Dorschner MO, Robertson PD, et al. Actionable exomic incidental findings in 6503 participants: challenges of variant classification. Genome Res 2015;25:305-315
    • (2015) Genome Res , vol.25 , pp. 305-315
    • Amendola, L.M.1    Dorschner, M.O.2    Robertson, P.D.3
  • 40
    • 84939157303 scopus 로고    scopus 로고
    • Assessment of incidental findings in 232 whole-exome sequences from the Baylor-Hopkins Center for Mendelian Genomics
    • Jurgens J, Ling H, Hetrick K, et al. Assessment of incidental findings in 232 whole-exome sequences from the Baylor-Hopkins Center for Mendelian Genomics. Genet Med 2015;17:782-788.
    • (2015) Genet Med , vol.17 , pp. 782-788
    • Jurgens, J.1    Ling, H.2    Hetrick, K.3


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