-
2
-
-
84887474444
-
Processes and preliminary outputs for identification of actionable genes as incidental findings in genomic sequence data in the Clinical Sequencing Exploratory Research Consortium
-
Berg JS, Amendola LM, Eng C, Van Allen E, Gray SW, Wagle N, Rehm HL, DeChene ET, Dulik MC, Hisama FM, et al. 2013. Processes and preliminary outputs for identification of actionable genes as incidental findings in genomic sequence data in the Clinical Sequencing Exploratory Research Consortium. Genet Med 15: 860-867.
-
(2013)
Genet Med
, vol.15
, pp. 860-867
-
-
Berg, J.S.1
Amendola, L.M.2
Eng, C.3
Van Allen, E.4
Gray, S.W.5
Wagle, N.6
Rehm, H.L.7
DeChene, E.T.8
Dulik, M.C.9
Hisama, F.M.10
-
3
-
-
84867478083
-
Improving the rigor of mutation reports: Biologic parentage and de novo mutations
-
Biesecker L. 2012. Improving the rigor of mutation reports: biologic parentage and de novo mutations. Hum Mutat 33: 1501-1502.
-
(2012)
Hum Mutat
, vol.33
, pp. 1501-1502
-
-
Biesecker, L.1
-
4
-
-
84965181241
-
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
-
Brownstein CA, Beggs AH, Homer N, Merriman B, Yu TW, Flannery KC, Dechene ET, Towne MC, Savage SK, Price EN, et al. 2014. An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. Genome Biol 15: R53.
-
(2014)
Genome Biol
, vol.15
, pp. R53
-
-
Brownstein, C.A.1
Beggs, A.H.2
Homer, N.3
Merriman, B.4
Yu, T.W.5
Flannery, K.C.6
Dechene, E.T.7
Towne, M.C.8
Savage, S.K.9
Price, E.N.10
-
5
-
-
19344374029
-
Nonsense-mediated mRNA decay: Molecular insights and mechanistic variations across species
-
Conti E, Izaurralde E. 2005. Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species. Curr Opin Cell Biol 17: 316-325.
-
(2005)
Curr Opin Cell Biol
, vol.17
, pp. 316-325
-
-
Conti, E.1
Izaurralde, E.2
-
6
-
-
22244452677
-
Distribution and intensity of constraint in mammalian genomic sequence
-
Cooper GM, Stone EA, Asimenos G, NISC Comparative Sequencing Program, Green ED, Batzoglou S, Sidow A. 2005. Distribution and intensity of constraint in mammalian genomic sequence. Genome Res 15: 901-913.
-
(2005)
Genome Res
, vol.15
, pp. 901-913
-
-
Cooper, G.M.1
Stone, E.A.2
Asimenos, G.3
Green, E.D.4
Batzoglou, S.5
Sidow, A.6
-
7
-
-
78651237647
-
Identifying a high fraction of the human genome to be under selective constraint using GERP++
-
Davydov EV, Goode DL, Sirota M, Cooper GM, Sidow A, Batzoglou S. 2010. Identifying a high fraction of the human genome to be under selective constraint using GERP++. PLoS Comput Biol 6: e1001025.
-
(2010)
PLoS Comput Biol
, vol.6
, pp. e1001025
-
-
Davydov, E.V.1
Goode, D.L.2
Sirota, M.3
Cooper, G.M.4
Sidow, A.5
Batzoglou, S.6
-
8
-
-
84885295208
-
Actionable, pathogenic incidental findings in 1,000 participants' exomes
-
Dorschner MO, Amendola LM, Turner EH, Robertson PD, Shirts BH, Gallego CJ, Bennett RL, Jones KL, Tokita MJ, Bennett JT, et al. 2013. Actionable, pathogenic incidental findings in 1,000 participants' exomes. Am J Hum Genet 93: 631-640.
-
(2013)
Am J Hum Genet
, vol.93
, pp. 631-640
-
-
Dorschner, M.O.1
Amendola, L.M.2
Turner, E.H.3
Robertson, P.D.4
Shirts, B.H.5
Gallego, C.J.6
Bennett, R.L.7
Jones, K.L.8
Tokita, M.J.9
Bennett, J.T.10
-
9
-
-
84885793006
-
A systematic approach to assessing the clinical significance of genetic variants
-
Duzkale H, Shen J, McLaughlin H, Alfares A, Kelly MA, Pugh TJ, Funke BH, Rehm HL, Lebo MS. 2013. A systematic approach to assessing the clinical significance of genetic variants. Clin Genet 84: 453-463.
-
(2013)
Clin Genet
, vol.84
, pp. 453-463
-
-
Duzkale, H.1
Shen, J.2
McLaughlin, H.3
Alfares, A.4
Kelly, M.A.5
Pugh, T.J.6
Funke, B.H.7
Rehm, H.L.8
Lebo, M.S.9
-
10
-
-
84907597238
-
A comprehensive laboratory-based program for classification of variants of uncertain significance in hereditary cancer genes
-
Eggington JM, Bowles KR, Moyes K, Manley S, Esterling L, Sizemore S, Rosenthal E, Theisen A, Saam J, Arnell C, et al. 2013. A comprehensive laboratory-based program for classification of variants of uncertain significance in hereditary cancer genes. Clin Genet 86: 229-237.
-
(2013)
Clin Genet
, vol.86
, pp. 229-237
-
-
Eggington, J.M.1
Bowles, K.R.2
Moyes, K.3
Manley, S.4
Esterling, L.5
Sizemore, S.6
Rosenthal, E.7
Theisen, A.8
Saam, J.9
Arnell, C.10
-
11
-
-
84888267800
-
Using exome data to identify malignant hyperthermia susceptibility mutations
-
Gonsalves SG, Ng D, Johnston JJ, Teer JK, Stenson PD, Cooper DN, Mullikin JC, Biesecker LG. 2013. Using exome data to identify malignant hyperthermia susceptibility mutations. Anesthesiology 119: 1043-1053.
-
(2013)
Anesthesiology
, vol.119
, pp. 1043-1053
-
-
Gonsalves, S.G.1
Ng, D.2
Johnston, J.J.3
Teer, J.K.4
Stenson, P.D.5
Cooper, D.N.6
Mullikin, J.C.7
Biesecker, L.G.8
-
12
-
-
84880535720
-
ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing
-
Green RC, Berg JS, Grody WW, Kalia SS, Korf BR, Martin CL, McGuire AL, Nussbaum RL, O'Daniel JM, Ormond KE, et al. 2013. ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing. Genet Med 15: 565-574.
-
(2013)
Genet Med
, vol.15
, pp. 565-574
-
-
Green, R.C.1
Berg, J.S.2
Grody, W.W.3
Kalia, S.S.4
Korf, B.R.5
Martin, C.L.6
McGuire, A.L.7
Nussbaum, R.L.8
O'Daniel, J.M.9
Ormond, K.E.10
-
13
-
-
78650844345
-
The search for unaffected individuals with Lynch syndrome: Do the ends justify the means?
-
Hampel H, de la Chapelle A. 2011. The search for unaffected individuals with Lynch syndrome: do the ends justify the means? Cancer Prev Res (Phila) 4: 1-5.
-
(2011)
Cancer Prev Res (Phila)
, vol.4
, pp. 1-5
-
-
Hampel, H.1
De La Chapelle, A.2
-
14
-
-
0033237314
-
The prevalence of common BRCA1 and BRCA2 mutations among Ashkenazi Jews
-
Hartge P, Struewing JP, Wacholder S, Brody LC, Tucker MA. 1999. The prevalence of common BRCA1 and BRCA2 mutations among Ashkenazi Jews. Am J Hum Genet 64: 963-970.
-
(1999)
Am J Hum Genet
, vol.64
, pp. 963-970
-
-
Hartge, P.1
Struewing, J.P.2
Wacholder, S.3
Brody, L.C.4
Tucker, M.A.5
-
15
-
-
79953168016
-
Truncating mutations in the last exon of NOTCH2 cause a rare skeletal disorder with osteoporosis
-
Truncating mutations in the last exon of NOTCH2 cause a rare skeletal disorder with osteoporosis. Nat Genet 43: 306-308.
-
(2011)
Nat Genet
, vol.43
, pp. 306-308
-
-
Isidor, B.1
Lindenbaum, P.2
Pichon, O.3
Bézieau, S.4
Dina, C.5
Jacquemont, S.6
Martin-Coignard, D.7
Thauvin-Robinet, C.8
Le Merrer, M.9
Mandel, J.L.10
-
16
-
-
79953086387
-
Founder BRCA1/2 mutations in the Europe: Implications for hereditary breast-ovarian cancer prevention and control
-
Janavičius R. 2010. Founder BRCA1/2 mutations in the Europe: implications for hereditary breast-ovarian cancer prevention and control. EPMA J 1: 397-412.
-
(2010)
EPMA J
, vol.1
, pp. 397-412
-
-
Janavičius, R.1
-
17
-
-
84863986933
-
Secondary variants in individuals undergoing exome sequencing: Screening of 572 individuals identifies high-penetrance mutations in cancer-susceptibility genes
-
Johnston JJ, Rubinstein WS, Facio FM, Ng D, Singh LN, Teer JK, Mullikin JC, Biesecker LG. 2012. Secondary variants in individuals undergoing exome sequencing: screening of 572 individuals identifies high-penetrance mutations in cancer-susceptibility genes. Am J Hum Genet 91: 97-108.
-
(2012)
Am J Hum Genet
, vol.91
, pp. 97-108
-
-
Johnston, J.J.1
Rubinstein, W.S.2
Facio, F.M.3
Ng, D.4
Singh, L.N.5
Teer, J.K.6
Mullikin, J.C.7
Biesecker, L.G.8
-
18
-
-
84895858942
-
A general framework for estimating the relative pathogenicity of human genetic variants
-
Kircher M, Witten DM, Jain P, O'Roak BJ, Cooper GM, Shendure J. 2014. A general framework for estimating the relative pathogenicity of human genetic variants. Nat Genet 46: 310-315.
-
(2014)
Nat Genet
, vol.46
, pp. 310-315
-
-
Kircher, M.1
Witten, D.M.2
Jain, P.3
O'Roak, B.J.4
Cooper, G.M.5
Shendure, J.6
-
19
-
-
84991491933
-
The implications of familial incidental findings from exome sequencing: The NIH Undiagnosed Diseases Program experience
-
Lawrence L, Sincan M, Markello T, Adams DR, Gill F, Godfrey R, Golas G, Groden C, Landis D, Nehrebecky M, et al. 2014. The implications of familial incidental findings from exome sequencing: the NIH Undiagnosed Diseases Program experience. Genet Med 16: 741-750.
-
(2014)
Genet Med
, vol.16
, pp. 741-750
-
-
Lawrence, L.1
Sincan, M.2
Markello, T.3
Adams, D.R.4
Gill, F.5
Godfrey, R.6
Golas, G.7
Groden, C.8
Landis, D.9
Nehrebecky, M.10
-
20
-
-
84899476119
-
Guidelines for investigating causality of sequence variants in human disease
-
MacArthur DG, Manolio TA, Dimmock DP, Rehm HL, Shendure J, Abecasis GR, Adams DR, Altman RB, Antonarakis SE, Ashley EA, et al. 2014. Guidelines for investigating causality of sequence variants in human disease. Nature 508: 469-476.
-
(2014)
Nature
, vol.508
, pp. 469-476
-
-
MacArthur, D.G.1
Manolio, T.A.2
Dimmock, D.P.3
Rehm, H.L.4
Shendure, J.5
Abecasis, G.R.6
Adams, D.R.7
Altman, R.B.8
Antonarakis, S.E.9
Ashley, E.A.10
-
21
-
-
0742323558
-
Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics
-
Maquat LE. 2004. Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics. Nat Rev Mol Cell Biol 5: 89-99.
-
(2004)
Nat Rev Mol Cell Biol
, vol.5
, pp. 89-99
-
-
Maquat, L.E.1
-
22
-
-
84884506830
-
Interpreting secondary cardiac disease variants in an exome cohort
-
Ng D, Johnston JJ, Teer JK, Singh LN, Peller LC, Wynter JS, Lewis KL, Cooper DN, Stenson PD, Mullikin JC, et al. 2013. Interpreting secondary cardiac disease variants in an exome cohort. Circ Cardiovasc Genet 6: 337-346.
-
(2013)
Circ Cardiovasc Genet
, vol.6
, pp. 337-346
-
-
Ng, D.1
Johnston, J.J.2
Teer, J.K.3
Singh, L.N.4
Peller, L.C.5
Wynter, J.S.6
Lewis, K.L.7
Cooper, D.N.8
Stenson, P.D.9
Mullikin, J.C.10
-
24
-
-
78649658370
-
Identification and functional characterization of malignant hyperthermia mutation T1354S in the outer pore of the Cava1S-subunit
-
Pirone A, Schredelseker J, Tuluc P, Gravino E, Fortunato G, Flucher BE, Carsana A, Salvatore F, Grabner M. 2010. Identification and functional characterization of malignant hyperthermia mutation T1354S in the outer pore of the Cava1S-subunit. Am J Physiol Cell Physiol 299: C1345-C1354.
-
(2010)
Am J Physiol Cell Physiol
, vol.299
, pp. C1345-C1354
-
-
Pirone, A.1
Schredelseker, J.2
Tuluc, P.3
Gravino, E.4
Fortunato, G.5
Flucher, B.E.6
Carsana, A.7
Salvatore, F.8
Grabner, M.9
-
25
-
-
33746512512
-
Principal components analysis corrects for stratification in genome-wide association studies
-
Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D. 2006. Principal components analysis corrects for stratification in genome-wide association studies. Nat Genet 38: 904-909.
-
(2006)
Nat Genet
, vol.38
, pp. 904-909
-
-
Price, A.L.1
Patterson, N.J.2
Plenge, R.M.3
Weinblatt, M.E.4
Shadick, N.A.5
Reich, D.6
-
26
-
-
0041743167
-
Monogenic hypercholesterolemia: New insights in pathogenesis and treatment
-
Rader DJ, Cohen J, Hobbs HH. 2003. Monogenic hypercholesterolemia: new insights in pathogenesis and treatment. J Clin Invest 111: 1795-1803.
-
(2003)
J Clin Invest
, vol.111
, pp. 1795-1803
-
-
Rader, D.J.1
Cohen, J.2
Hobbs, H.H.3
-
27
-
-
77953446523
-
The Human Gene Mutation Database: 2008 update
-
Stenson PD, Mort M, Ball EV, Howells K, Phillips AD, Thomas NS, Cooper DN. 2009. The Human Gene Mutation Database: 2008 update. Genome Med 1: 13.
-
(2009)
Genome Med
, vol.1
, pp. 13
-
-
Stenson, P.D.1
Mort, M.2
Ball, E.V.3
Howells, K.4
Phillips, A.D.5
Thomas, N.S.6
Cooper, D.N.7
-
28
-
-
84895789502
-
Application of a 5-tiered scheme for standardized classification of 2,360 unique mismatch repair gene variants in the InSiGHT locus-specific database
-
Thompson BA, Spurdle AB, Plazzer JP, Greenblatt MS, Akagi K, Al-Mulla F, Bapat B, Bernstein I, Capella G, den Dunnen JT, et al. 2014. Application of a 5-tiered scheme for standardized classification of 2,360 unique mismatch repair gene variants in the InSiGHT locus-specific database. Nat Genet 46: 107-115.
-
(2014)
Nat Genet
, vol.46
, pp. 107-115
-
-
Thompson, B.A.1
Spurdle, A.B.2
Plazzer, J.P.3
Greenblatt, M.S.4
Akagi, K.5
Al-Mulla, F.6
Bapat, B.7
Bernstein, I.8
Capella, G.9
Den Dunnen, J.T.10
|