-
1
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin, A.-C. et al. Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415, 141-147 (2002).
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.-C.1
-
2
-
-
33646347144
-
The origins and evolution of functional modules: Lessons from protein complexes
-
Pereira-Leal, J. B., Levy, E. D. & Teichmann, S. A. The origins and evolution of functional modules: lessons from protein complexes. Philosophical Transactions of the Royal Society B: Biological Sciences 361, 507-517 (2006).
-
(2006)
Philosophical Transactions of the Royal Society B: Biological Sciences
, vol.361
, pp. 507-517
-
-
Pereira-Leal, J.B.1
Levy, E.D.2
Teichmann, S.A.3
-
3
-
-
13244284551
-
Dynamic complex formation during the yeast cell cycle
-
de Lichtenberg, U., Jensen, L. J., Brunak, S. & Bork, P. Dynamic complex formation during the yeast cell cycle. science 307, 724-727 (2005).
-
(2005)
Science
, vol.307
, pp. 724-727
-
-
De Lichtenberg, U.1
Jensen, L.J.2
Brunak, S.3
Bork, P.4
-
4
-
-
84862765284
-
Towards a molecular architecture of centriole assembly
-
Gönczy, P. Towards a molecular architecture of centriole assembly. Nature Reviews Molecular Cell Biology 13, 425-435 (2012).
-
(2012)
Nature Reviews Molecular Cell Biology
, vol.13
, pp. 425-435
-
-
Gönczy, P.1
-
5
-
-
0019775373
-
Centriole cycle in Chinese hamster ovary cells as determined by whole-mount electron microscopy
-
Kuriyama, R. & Borisy, G. G. Centriole cycle in chinese hamster ovary cells as determined by whole-mount electron microscopy. The Journal of Cell Biology 91, 814-21 (1981).
-
(1981)
The Journal of Cell Biology
, vol.91
, pp. 814-821
-
-
Kuriyama, R.1
Borisy, G.G.2
-
6
-
-
0345596369
-
Reconstruction of the Centrosome Cycle from Cryoelectron Micrographs
-
Chrétien, D., Buendia, B., Fuller, S. D. & Karsenti, E. Reconstruction of the Centrosome Cycle from Cryoelectron Micrographs. Journal of Structural Biology 120, 117-133 (1997).
-
(1997)
Journal of Structural Biology
, vol.120
, pp. 117-133
-
-
Chrétien, D.1
Buendia, B.2
Fuller, S.D.3
Karsenti, E.4
-
7
-
-
80053553994
-
The centrosome cycle: Centriole biogenesis, duplication and inherent asymmetries
-
Nigg, E. A. & Stearns, T. The centrosome cycle: Centriole biogenesis, duplication and inherent asymmetries. Nature Cell Biology 13, 1154-1160 (2011).
-
(2011)
Nature Cell Biology
, vol.13
, pp. 1154-1160
-
-
Nigg, E.A.1
Stearns, T.2
-
8
-
-
34447514268
-
Structure and duplication of the centrosome
-
Azimzadeh, J. & Bornens, M. Structure and duplication of the centrosome. Journal of Cell Science 120, 2139-2142 (2007).
-
(2007)
Journal of Cell Science
, vol.120
, pp. 2139-2142
-
-
Azimzadeh, J.1
Bornens, M.2
-
10
-
-
84857691732
-
Deconstructing the centriole: Structure and number control
-
Brito, D. A., Gouveia, S. M. & Bettencourt-Dias, M. Deconstructing the centriole: structure and number control. Current Opinion in Cell Biology 24, 4-13 (2012).
-
(2012)
Current Opinion in Cell Biology
, vol.24
, pp. 4-13
-
-
Brito, D.A.1
Gouveia, S.M.2
Bettencourt-Dias, M.3
-
11
-
-
0014291368
-
Reconstructions of centriole formation and ciliogenesis in mammalian lungs
-
Sorokin, S. P. Reconstructions of centriole formation and ciliogenesis in mammalian lungs. Journal of Cell Science 3, 207-230 (1968).
-
(1968)
Journal of Cell Science
, vol.3
, pp. 207-230
-
-
Sorokin, S.P.1
-
12
-
-
84885390501
-
Deuterosome-mediated centriole biogenesis
-
Dehring, D. A. K. et al. Deuterosome-mediated centriole biogenesis. Developmental Cell 27, 103-112 (2013).
-
(2013)
Developmental Cell
, vol.27
, pp. 103-112
-
-
Dehring, D.A.K.1
-
13
-
-
84893353424
-
The cep63 paralogue deup1 enables massive de novo centriole biogenesis for vertebrate multiciliogenesis
-
Zhao, H. et al. The cep63 paralogue deup1 enables massive de novo centriole biogenesis for vertebrate multiciliogenesis. Nature Cell Biology 15, 1434-1444 (2013).
-
(2013)
Nature Cell Biology
, vol.15
, pp. 1434-1444
-
-
Zhao, H.1
-
14
-
-
84922332985
-
Centriole amplification by mother and daughter centrioles differs in multiciliated cells
-
Al Jord, A. et al. Centriole amplification by mother and daughter centrioles differs in multiciliated cells. Nature 516, 104-107 (2014).
-
(2014)
Nature
, vol.516
, pp. 104-107
-
-
Al Jord, A.1
-
16
-
-
0016143898
-
Basal body and flagellar development during the vegetative cell cycle and the sexual cycle of chlamydomonas reinhardii
-
Cavalier-Smith, T. Basal body and flagellar development during the vegetative cell cycle and the sexual cycle of chlamydomonas reinhardii. Journal of Cell Science 16, 529-556 (1974).
-
(1974)
Journal of Cell Science
, vol.16
, pp. 529-556
-
-
Cavalier-Smith, T.1
-
17
-
-
84883829412
-
Native architecture of the centriole proximal region reveals features underlying its 9-fold radial symmetry
-
Guichard, P. et al. Native Architecture of the Centriole Proximal Region Reveals Features Underlying Its 9-Fold Radial Symmetry. Current Biology 23, 1620-1628 (2013).
-
(2013)
Current Biology
, vol.23
, pp. 1620-1628
-
-
Guichard, P.1
-
18
-
-
10644253531
-
Centriole assembly requires both centriolar and pericentriolar material proteins
-
Dammermann, A. et al. Centriole assembly requires both centriolar and pericentriolar material proteins. Developmental cell 7, 815-829 (2004).
-
(2004)
Developmental Cell
, vol.7
, pp. 815-829
-
-
Dammermann, A.1
-
19
-
-
13944278891
-
Sas-6 defines a protein family required for centrosome duplication in c elegans and in human cells
-
Leidel, S., Delattre, M., Cerutti, L., Baumer, K. & Gönczy, P. Sas-6 defines a protein family required for centrosome duplication in c. elegans and in human cells. Nature Cell Biology 7, 115-125 (2005).
-
(2005)
Nature Cell Biology
, vol.7
, pp. 115-125
-
-
Leidel, S.1
Delattre, M.2
Cerutti, L.3
Baumer, K.4
Gönczy, P.5
-
20
-
-
48449085139
-
Sas-6 is a cartwheel protein that establishes the 9-fold symmetry of the centriole
-
Nakazawa, Y., Hiraki, M., Kamiya, R. & Hirono, M. Sas-6 is a cartwheel protein that establishes the 9-fold symmetry of the centriole. Current Biology 17, 2169-2174 (2007).
-
(2007)
Current Biology
, vol.17
, pp. 2169-2174
-
-
Nakazawa, Y.1
Hiraki, M.2
Kamiya, R.3
Hirono, M.4
-
21
-
-
84856290771
-
The centrosome in cells and organisms
-
Bornens, M. The centrosome in cells and organisms. Science 335, 422-426 (2012).
-
(2012)
Science
, vol.335
, pp. 422-426
-
-
Bornens, M.1
-
22
-
-
79651473154
-
Structural basis of the 9-fold symmetry of centrioles
-
Kitagawa, D. et al. Structural Basis of the 9-Fold Symmetry of Centrioles. Cell 144, 364-375 (2011).
-
(2011)
Cell
, vol.144
, pp. 364-375
-
-
Kitagawa, D.1
-
23
-
-
84895741630
-
Mechanisms of hssas-6 assembly promoting centriole formation in human cells
-
Keller, D. et al. Mechanisms of hssas-6 assembly promoting centriole formation in human cells. The Journal of Cell Biology 204, 697-712 (2014).
-
(2014)
The Journal of Cell Biology
, vol.204
, pp. 697-712
-
-
Keller, D.1
-
24
-
-
79952280152
-
Structures of sas-6 suggest its organization in centrioles
-
van Breugel, M. et al. Structures of SAS-6 Suggest Its Organization in Centrioles. Science 331, 1196-1199 (2011).
-
(2011)
Science
, vol.331
, pp. 1196-1199
-
-
Van Breugel, M.1
-
25
-
-
84898737594
-
Structure of the sas-6 cartwheel hub from leishmania major
-
van Breugel, M., Wilcken, R., McLaughlin, S. H., Rutherford, T. J. & Johnson, C. M. Structure of the sas-6 cartwheel hub from leishmania major. eLife 3 (2014).
-
(2014)
ELife
, vol.3
-
-
Van Breugel, M.1
Wilcken, R.2
McLaughlin, S.H.3
Rutherford, T.J.4
Johnson, C.M.5
-
26
-
-
84961392903
-
Sas-6 engineering reveals interdependence between cartwheel and microtubules in determining centriole architecture
-
Hilbert, M. et al. Sas-6 engineering reveals interdependence between cartwheel and microtubules in determining centriole architecture. Nature Cell Biology 18, 393-403 (2016).
-
(2016)
Nature Cell Biology
, vol.18
, pp. 393-403
-
-
Hilbert, M.1
-
27
-
-
33748520215
-
Stochastic simulation of chemical reactions with spatial resolution and single molecule detail
-
Andrews, S. S. & Bray, D. Stochastic simulation of chemical reactions with spatial resolution and single molecule detail. Physical Biology 1, 137 (2004).
-
(2004)
Physical Biology
, vol.1
, pp. 137
-
-
Andrews, S.S.1
Bray, D.2
-
28
-
-
29244454300
-
Greens-function reaction dynamics: A particle-based approach for simulating biochemical networks in time and space
-
van Zon, J. S. & ten Wolde, P. R. Greens-function reaction dynamics: A particle-based approach for simulating biochemical networks in time and space. The Journal of Chemical Physics 123, 234910 (2005).
-
(2005)
The Journal of Chemical Physics
, vol.123
, pp. 234910
-
-
Van Zon, J.S.1
Ten Wolde, P.R.2
-
29
-
-
49349114529
-
Reaction Brownian dynamics and the effect of spatial fluctuations on the gain of a push-pull network
-
Morelli, M. J. & ten Wolde, P. R. Reaction Brownian dynamics and the effect of spatial fluctuations on the gain of a push-pull network. The Journal of Chemical Physics 129, 054112 (2008).
-
(2008)
The Journal of Chemical Physics
, vol.129
, pp. 054112
-
-
Morelli, M.J.1
Ten Wolde, P.R.2
-
30
-
-
84878582888
-
Spatial simulations in systems biology: From molecules to cells
-
Klann, M. & Koeppl, H. Spatial Simulations in Systems Biology: From Molecules to Cells. International Journal of Molecular Sciences 13, 7798-7827 (2012).
-
(2012)
International Journal of Molecular Sciences
, vol.13
, pp. 7798-7827
-
-
Klann, M.1
Koeppl, H.2
-
31
-
-
84922203053
-
Simulation tools for particle-based reaction-diffusion dynamics in continuous space
-
Schöneberg, J., Ullrich, A. & Noé, F. Simulation tools for particle-based reaction-diffusion dynamics in continuous space. BMC Biophysics 7, 11 (2014).
-
(2014)
BMC Biophysics
, vol.7
, pp. 11
-
-
Schöneberg, J.1
Ullrich, A.2
Noé, F.3
-
32
-
-
84904821879
-
Studying protein assembly with reversible brownian dynamics of patchy particles
-
Klein, H. C. R. & Schwarz, U. S. Studying protein assembly with reversible brownian dynamics of patchy particles. The Journal of Chemical Physics 140, 184112 (2014).
-
(2014)
The Journal of Chemical Physics
, vol.140
, pp. 184112
-
-
Klein, H.C.R.1
Schwarz, U.S.2
-
34
-
-
33847722306
-
Mean first passage times for bond formation for a Brownian particle in linear shear flow above a wall
-
Korn, C. B. & Schwarz, U. S. Mean first passage times for bond formation for a Brownian particle in linear shear flow above a wall. The Journal of Chemical Physics 126, 095103-095103 (2007).
-
(2007)
The Journal of Chemical Physics
, vol.126
, pp. 095103
-
-
Korn, C.B.1
Schwarz, U.S.2
-
35
-
-
54849429367
-
Dynamics of protein-protein encounter: A Langevin equation approach with reaction patches
-
Schluttig, J., Alamanova, D., Helms, V. & Schwarz, U. S. Dynamics of protein-protein encounter: A Langevin equation approach with reaction patches. The Journal of Chemical Physics 129, 155106 (2008).
-
(2008)
The Journal of Chemical Physics
, vol.129
, pp. 155106
-
-
Schluttig, J.1
Alamanova, D.2
Helms, V.3
Schwarz, U.S.4
-
36
-
-
0017403408
-
Hydrodynamic properties of macromolecular complexes. I. Translation
-
de la Torre, J. G. & Bloomfield, V. A. Hydrodynamic properties of macromolecular complexes. i.Translation. Biopolymers 16, 1747-1763 (1977).
-
(1977)
Biopolymers
, vol.16
, pp. 1747-1763
-
-
De La Torre, J.G.1
Bloomfield, V.A.2
-
37
-
-
0000695805
-
Improved hydrodynamic interaction in macromolecular bead models
-
Carrasco, B. & de la Torre, J. G. Improved hydrodynamic interaction in macromolecular bead models. The Journal of Chemical Physics 111, 4817 (1999).
-
(1999)
The Journal of Chemical Physics
, vol.111
, pp. 4817
-
-
Carrasco, B.1
De La Torre, J.G.2
-
38
-
-
0020199402
-
Role of diffusion in ligand binding to macromolecules and cell-bound receptors
-
Shoup, D. & Szabo, A. Role of diffusion in ligand binding to macromolecules and cell-bound receptors. Biophysical Journal 40, 33 (1982).
-
(1982)
Biophysical Journal
, vol.40
, pp. 33
-
-
Shoup, D.1
Szabo, A.2
-
39
-
-
0026607545
-
Kinetics of protein-protein association explained by brownian dynamics computer simulation
-
Northrup, S. H. & Erickson, H. P. Kinetics of protein-protein association explained by brownian dynamics computer simulation. Proceedings of the National Academy of Sciences 89, 3338-3342 (1992).
-
(1992)
Proceedings of the National Academy of Sciences
, vol.89
, pp. 3338-3342
-
-
Northrup, S.H.1
Erickson, H.P.2
-
40
-
-
0033884302
-
A grand canonical monte carlo-brownian dynamics algorithm for simulating ion channels
-
Im, W., Seefeld, S. & Roux, B. A grand canonical monte carlo-brownian dynamics algorithm for simulating ion channels. Biophysical Journal 79, 788-801 (2000).
-
(2000)
Biophysical Journal
, vol.79
, pp. 788-801
-
-
Im, W.1
Seefeld, S.2
Roux, B.3
-
41
-
-
0000787925
-
Grand canonical brownian dynamics simulation of colloidal adsorption
-
Oberholzer, M. R., Wagner, N. J. & Lenhoff, A. M. Grand canonical brownian dynamics simulation of colloidal adsorption. The Journal of Chemical Physics 107, 9157-9167 (1997).
-
(1997)
The Journal of Chemical Physics
, vol.107
, pp. 9157-9167
-
-
Oberholzer, M.R.1
Wagner, N.J.2
Lenhoff, A.M.3
-
42
-
-
3142652094
-
Theoretical and computational models of biological ion channels
-
Roux, B., Allen, T., Berneche, S. & Im, W. Theoretical and computational models of biological ion channels. Quarterly Reviews of Biophysics 37, 15-103 (2004).
-
(2004)
Quarterly Reviews of Biophysics
, vol.37
, pp. 15-103
-
-
Roux, B.1
Allen, T.2
Berneche, S.3
Im, W.4
-
43
-
-
40549134985
-
Electrostatic rate enhancement and transient complex of protein-protein association
-
Alsallaq, R. & Zhou, H.-X. Electrostatic rate enhancement and transient complex of protein-protein association. Proteins: Structure, Function, and Bioinformatics 71, 320-335 (2008).
-
(2008)
Proteins: Structure, Function and Bioinformatics
, vol.71
, pp. 320-335
-
-
Alsallaq, R.1
Zhou, H.-X.2
-
44
-
-
44949233135
-
Prediction of salt and mutational effects on the association rate of u1a protein and u1 small nuclear RNA stem/loop II
-
Qin, S. & Zhou, H.-X. Prediction of salt and mutational effects on the association rate of u1a protein and u1 small nuclear rna stem/loop ii. The Journal of Physical Chemistry B 112, 5955-5960 (2008).
-
(2008)
The Journal of Physical Chemistry B
, vol.112
, pp. 5955-5960
-
-
Qin, S.1
Zhou, H.-X.2
-
45
-
-
82955239904
-
Automated prediction of protein association rate constants
-
Qin, S., Pang, X. & Zhou, H.-X. Automated Prediction of Protein Association Rate Constants. Structure 19, 1744-1751 (2011).
-
(2011)
Structure
, vol.19
, pp. 1744-1751
-
-
Qin, S.1
Pang, X.2
Zhou, H.-X.3
-
46
-
-
0001518899
-
Kinetics of diffusion-influenced reactions studied by brownian dynamics
-
Zhou, H.-X. Kinetics of Diffusion-Influenced Reactions Studied by Brownian Dynamics. Journal of Physical Chemistry 94, 8794-8800 (1990).
-
(1990)
Journal of Physical Chemistry
, vol.94
, pp. 8794-8800
-
-
Zhou, H.-X.1
-
47
-
-
0029998567
-
Theory and simulation of the time-dependent rate coefficients of diffusion-influenced reactions
-
Zhou, H.-X. & Szabo, A. Theory and simulation of the time-dependent rate coefficients of diffusion-influenced reactions. Biophysical Journal 71, 2440-2457 (1996).
-
(1996)
Biophysical Journal
, vol.71
, pp. 2440-2457
-
-
Zhou, H.-X.1
Szabo, A.2
-
49
-
-
84866998997
-
Surveying capsid assembly pathways through simulation-based data fitting
-
Xie, L., Smith, G. R., Feng, X. & Schwartz, R. Surveying capsid assembly pathways through simulation-based data fitting. Biophysical Journal 103, 1545-1554 (2012).
-
(2012)
Biophysical Journal
, vol.103
, pp. 1545-1554
-
-
Xie, L.1
Smith, G.R.2
Feng, X.3
Schwartz, R.4
-
50
-
-
84873409469
-
Selective chemical crosslinking reveals a cep57-cep63-cep152 centrosomal complex
-
Lukinavičius, G. et al. Selective chemical crosslinking reveals a cep57-cep63-cep152 centrosomal complex. Current Biology 23, 265-270 (2013).
-
(2013)
Current Biology
, vol.23
, pp. 265-270
-
-
Lukinavičius, G.1
-
51
-
-
48449095734
-
Mechanisms of procentriole formation
-
Strnad, P. & Gönczy, P. Mechanisms of procentriole formation. Trends in Cell Biology 18, 389-396 (2008).
-
(2008)
Trends in Cell Biology
, vol.18
, pp. 389-396
-
-
Strnad, P.1
Gönczy, P.2
-
52
-
-
84864739620
-
Cartwheel architecture of trichonympha basal body
-
Guichard, P. et al. Cartwheel architecture of trichonympha basal body. Science 337, 553-553 (2012).
-
(2012)
Science
, vol.337
, pp. 553
-
-
Guichard, P.1
-
53
-
-
14744271979
-
The de novo centriole assembly pathway in hela cells cell cycle progression and centriole assembly/maturation
-
La Terra, S. et al. The de novo centriole assembly pathway in hela cells cell cycle progression and centriole assembly/maturation. The Journal of Cell Biology 168, 713-722 (2005).
-
(2005)
The Journal of Cell Biology
, vol.168
, pp. 713-722
-
-
La Terra, S.1
-
54
-
-
84955261607
-
De novo centriole formation in human cells is error-prone and does not require sas-6 self-Assembly
-
Wang, W.-J. et al. De novo centriole formation in human cells is error-prone and does not require sas-6 self-Assembly. eLife 4, e10586 (2015).
-
(2015)
ELife
, vol.4
, pp. e10586
-
-
Wang, W.-J.1
-
55
-
-
77957578113
-
Physical virology
-
Roos, W. H., Bruinsma, R. & Wuite, G. J. L. Physical virology. Nature Physics 6, 733-743 (2010).
-
(2010)
Nature Physics
, vol.6
, pp. 733-743
-
-
Roos, W.H.1
Bruinsma, R.2
Wuite, G.J.L.3
-
56
-
-
43449131843
-
Controlling viral capsid assembly with templating
-
Hagan, M. F. Controlling viral capsid assembly with templating. Physical Review E 77, 051904 (2008).
-
(2008)
Physical Review e
, vol.77
, pp. 051904
-
-
Hagan, M.F.1
|