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Volumn 54, Issue 7, 2016, Pages 1766-1773

Development and validation of a quantitative, one-step, multiplex, real-time reverse transcriptase PCR assay for detection of dengue and chikungunya viruses

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

EID: 84976350934     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00299-16     Document Type: Article
Times cited : (35)

References (40)
  • 1
    • 78751649070 scopus 로고    scopus 로고
    • Dengue hemorrhagic fever and shock syndromes
    • Ranjit S, Kissoon N. 2011. Dengue hemorrhagic fever and shock syndromes. Pediatr Crit Care Med 12:90-100. http://dx. doi. org/10. 1097/PCC. 0b013e3181e911a7.
    • (2011) Pediatr Crit Care Med , vol.12 , pp. 90-100
    • Ranjit, S.1    Kissoon, N.2
  • 3
    • 0025037999 scopus 로고
    • Molecular evolution and distribution of dengue viruses type 1 and 2 in nature
    • Rico-Hesse R. 1990. Molecular evolution and distribution of dengue viruses type 1 and 2 in nature. Virology 174:479-493. http://dx. doi. org/10.1016/0042-6822(90)90102-W.
    • (1990) Virology , vol.174 , pp. 479-493
    • Rico-Hesse, R.1
  • 4
    • 0023818748 scopus 로고
    • Pathogenesis of dengue: Challenges to molecular biology
    • Halstead SB. 1988. Pathogenesis of dengue: challenges to molecular biology. Science 239:476-481. http://dx. doi. org/10. 1126/science. 3277268.
    • (1988) Science , vol.239 , pp. 476-481
    • Halstead, S.B.1
  • 5
    • 0029279259 scopus 로고
    • Dengue/dengue hemorrhagic fever: The emergence of a global health problem
    • Gubler DJ, Clark GG. 1995. Dengue/dengue hemorrhagic fever: the emergence of a global health problem. Emerg Infect Dis 1:55-57. http://dx.doi. org/10. 3201/eid0102. 952004.
    • (1995) Emerg Infect Dis , vol.1 , pp. 55-57
    • Gubler, D.J.1    Clark, G.G.2
  • 6
    • 52449105099 scopus 로고
    • An epidemic of a dengue-like fever in the southern province of Tanganyika
    • Robinson M. 1956. An epidemic of a dengue-like fever in the southern province of Tanganyika. Central Afr J Med 2:394.
    • (1956) Central Afr J Med , vol.2 , pp. 394
    • Robinson, M.1
  • 8
    • 41349109780 scopus 로고    scopus 로고
    • Increased mortality rate associated with chikungunya epidemic, Ahmedabad, India
    • Mavalankar D, Shastri P, Bandyopadhyay T, Parmar J, Ramani KV. 2008. Increased mortality rate associated with chikungunya epidemic, Ahmedabad, India. Emerg Infect Dis 14:412. http://dx. doi. org/10. 3201/eid1403. 070720.
    • (2008) Emerg Infect Dis , vol.14 , pp. 412
    • Mavalankar, D.1    Shastri, P.2    Bandyopadhyay, T.3    Parmar, J.4    Ramani, K.V.5
  • 10
    • 0015098483 scopus 로고
    • Chikungunya and dengue: A case of mistaken identity?
    • Carey DE. 1971. Chikungunya and dengue: a case of mistaken identity? J Hist Med Allied Sci 26:243-262.
    • (1971) J Hist Med Allied Sci , vol.26 , pp. 243-262
    • Carey, D.E.1
  • 11
    • 0000544978 scopus 로고
    • Recent epidemics caused by Chikungunya virus in India, 1963-1965
    • Rao T. 1966. Recent epidemics caused by Chikungunya virus in India, 1963-1965. Sci Culture 32:215.
    • (1966) Sci Culture , vol.32 , pp. 215
    • Rao, T.1
  • 12
    • 0014600034 scopus 로고
    • Dengue and chikungunya virus infection in man in Thailand, 1962-1964 i Observations on hospitalized patients with hemorrhagic fever
    • Nimmannitya S, Halstead SB, Cohen SN, Margiotta MR. 1969. Dengue and chikungunya virus infection in man in Thailand, 1962-1964. I. Observations on hospitalized patients with hemorrhagic fever. Am J Trop Med Hyg 18:954-971.
    • (1969) Am J Trop Med Hyg , vol.18 , pp. 954-971
    • Nimmannitya, S.1    Halstead, S.B.2    Cohen, S.N.3    Margiotta, M.R.4
  • 13
    • 0014462178 scopus 로고
    • The 1964 chikungunya epidemic at Vellore, South India, including observations on concurrent dengue
    • Carey DE, Myers RM, DeRanitz C, Jadhav M, Reuben R. 1969. The 1964 chikungunya epidemic at Vellore, South India, including observations on concurrent dengue. Trans R Soc Trop Med Hyg 63:434-445. http://dx. doi.org/10. 1016/0035-9203(69)90030-3.
    • (1969) Trans R Soc Trop Med Hyg , vol.63 , pp. 434-445
    • Carey, D.E.1    Myers, R.M.2    DeRanitz, C.3    Jadhav, M.4    Reuben, R.5
  • 14
    • 0000635964 scopus 로고
    • Chikungunya virus disease
    • In Monath TP (ed),. CRC Press, Boca Raton, FL
    • Jupp P, McIntosh B. 1988. Chikungunya virus disease, p 137-157. In Monath TP (ed), The arboviruses: epidemiology and ecology, vol 2. CRC Press, Boca Raton, F.L.
    • (1988) The Arboviruses: Epidemiology and Ecology , vol.2 , pp. 137-157
    • Jupp, P.1    McIntosh, B.2
  • 15
    • 84918824102 scopus 로고    scopus 로고
    • Risks to the Americas associated with the continued expansion of chikungunya virus
    • Powers AM. 2015. Risks to the Americas associated with the continued expansion of chikungunya virus. J Gen Virol 96:1-5. http://dx. doi. org/10.1099/vir. 0. 070136-0.
    • (2015) J Gen Virol , vol.96 , pp. 1-5
    • Powers, A.M.1
  • 16
    • 84926673315 scopus 로고    scopus 로고
    • Venezuela: Far from the path to dengue and chikungunya control
    • Rodríguez-Morales AJ, Paniz-Mondolfi AE. 2015. Venezuela: far from the path to dengue and chikungunya control. J Clin Virol 66:60-61. http://dx. doi. org/10. 1016/j. jcv. 2015. 02. 020.
    • (2015) J Clin Virol , vol.66 , pp. 60-61
    • Rodríguez-Morales, A.J.1    Paniz-Mondolfi, A.E.2
  • 17
    • 84901774284 scopus 로고    scopus 로고
    • Notes from the field: Chikungunya virus spreads in the Americas-Caribbean and South America, 2013-2014
    • Fischer M, Staples JE. 2014. Notes from the field: chikungunya virus spreads in the Americas-Caribbean and South America, 2013-2014. MMWR Morb Mortal Wkly Rep 63:500-501.
    • (2014) MMWR Morb Mortal Wkly Rep , vol.63 , pp. 500-501
    • Fischer, M.1    Staples, J.E.2
  • 20
    • 84879454509 scopus 로고    scopus 로고
    • Development of an internally controlled real-time reverse transcriptase PCR assay for pan-dengue virus detection and comparison of four molecular dengue virus detection assays
    • Waggoner JJ, Abeynayake J, Sahoo MK, Gresh L, Tellez Y, Gonzalez K, Ballesteros G, Balmaseda A, Karunaratne K, Harris E. 2013. Development of an internally controlled real-time reverse transcriptase PCR assay for pan-dengue virus detection and comparison of four molecular dengue virus detection assays. J Clin Microbiol 51:2172-2181. http://dx. doi. org/10. 1128/JCM. 00548-13.
    • (2013) J Clin Microbiol , vol.51 , pp. 2172-2181
    • Waggoner, J.J.1    Abeynayake, J.2    Sahoo, M.K.3    Gresh, L.4    Tellez, Y.5    Gonzalez, K.6    Ballesteros, G.7    Balmaseda, A.8    Karunaratne, K.9    Harris, E.10
  • 21
    • 84884809277 scopus 로고    scopus 로고
    • Comparison of the FDA-approved CDC DENV-1-4 real-time reverse transcription-PCR with a laboratory-developed assay for dengue virus detection and serotyping
    • Waggoner JJ, Abeynayake J, Sahoo MK, Gresh L, Tellez Y, Gonzalez K, Ballesteros G, Guo FP, Balmaseda A, Karunaratne K. 2013. Comparison of the FDA-approved CDC DENV-1-4 real-time reverse transcription-PCR with a laboratory-developed assay for dengue virus detection and serotyping. J Clin Microbiol 51:3418-3420. http://dx. doi. org/10. 1128/JCM. 01359-13.
    • (2013) J Clin Microbiol , vol.51 , pp. 3418-3420
    • Waggoner, J.J.1    Abeynayake, J.2    Sahoo, M.K.3    Gresh, L.4    Tellez, Y.5    Gonzalez, K.6    Ballesteros, G.7    Guo, F.P.8    Balmaseda, A.9    Karunaratne, K.10
  • 22
    • 10844252864 scopus 로고    scopus 로고
    • Development and evaluation of fluorogenic TaqMan reverse transcriptase PCR assays for detection of dengue virus types 1 to 4
    • Ito M, Takasaki T, Yamada K, Nerome R, Tajima S, Kurane I. 2004. Development and evaluation of fluorogenic TaqMan reverse transcriptase PCR assays for detection of dengue virus types 1 to 4. J Clin Microbiol 42:5935-5937. http://dx. doi. org/10. 1128/JCM. 42. 12. 5935-5937. 2004.
    • (2004) J Clin Microbiol , vol.42 , pp. 5935-5937
    • Ito, M.1    Takasaki, T.2    Yamada, K.3    Nerome, R.4    Tajima, S.5    Kurane, I.6
  • 23
    • 0026580422 scopus 로고
    • Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction
    • Lanciotti RS, Calisher CH, Gubler DJ, Chang GJ, Vorndam AV. 1992. Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction. J Clin Microbiol 30:545-551.
    • (1992) J Clin Microbiol , vol.30 , pp. 545-551
    • Lanciotti, R.S.1    Calisher, C.H.2    Gubler, D.J.3    Chang, G.J.4    Vorndam, A.V.5
  • 24
    • 12444335615 scopus 로고    scopus 로고
    • Development of a TaqMan RT-PCR assay without RNA extraction step for the detection and quantification of African Chikungunya viruses
    • Pastorino B, Bessaud M, Grandadam M, Murri S, Tolou HJ, Peyrefitte CN. 2005. Development of a TaqMan RT-PCR assay without RNA extraction step for the detection and quantification of African Chikungunya viruses. J Virol Methods 124:65-71. http://dx. doi. org/10. 1016/j. jviromet.2004. 11. 002.
    • (2005) J Virol Methods , vol.124 , pp. 65-71
    • Pastorino, B.1    Bessaud, M.2    Grandadam, M.3    Murri, S.4    Tolou, H.J.5    Peyrefitte, C.N.6
  • 25
    • 34547657627 scopus 로고    scopus 로고
    • Development of a sensitive real-time reverse transcriptase PCR assay with an internal control to detect and quantify chikungunya virus
    • Laurent P, Le Roux K, Grivard P, Bertil G, Naze F, Picard M, Staikowsky F, Barau G, Schuffenecker I, Michault A. 2007. Development of a sensitive real-time reverse transcriptase PCR assay with an internal control to detect and quantify chikungunya virus. Clin Chem 53:1408-1414. http://dx. doi. org/10. 1373/clinchem. 2007. 086595.
    • (2007) Clin Chem , vol.53 , pp. 1408-1414
    • Laurent, P.1    Le Roux, K.2    Grivard, P.3    Bertil, G.4    Naze, F.5    Picard, M.6    Staikowsky, F.7    Barau, G.8    Schuffenecker, I.9    Michault, A.10
  • 26
    • 0037085729 scopus 로고    scopus 로고
    • Real-time PCR in virology
    • Mackay IM, Arden KE, Nitsche A. 2002. Real-time PCR in virology. Nucleic Acids Res 30:1292-1305. http://dx. doi. org/10. 1093/nar/30. 6. 1292.
    • (2002) Nucleic Acids Res , vol.30 , pp. 1292-1305
    • Mackay, I.M.1    Arden, K.E.2    Nitsche, A.3
  • 27
    • 0035021836 scopus 로고    scopus 로고
    • Development of a fluorogenic RT-PCR system for quantitative identification of dengue virus serotypes 1-4 using conserved and serotypespecific 3= noncoding sequences
    • Houng HS, Chung-Ming Chen R, Vaughn DW, Kanesa-thasan, N. 2001. Development of a fluorogenic RT-PCR system for quantitative identification of dengue virus serotypes 1-4 using conserved and serotypespecific 3= noncoding sequences. J Virol Methods 95:19-32. http://dx. doi.org/10. 1016/S0166-0934(01)00280-4.
    • (2001) J Virol Methods , vol.95 , pp. 19-32
    • Houng, H.S.1    Chung-Ming Chen, R.2    Vaughn, D.W.3    Kanesa-Thasan, N.4
  • 28
    • 0034098531 scopus 로고    scopus 로고
    • Quantitative detection of dengue 2 virus using fluorogenic RT-PCR based on 3=-noncoding sequence
    • Houng HH, Hritz D, Kanesa-thasan, N. 2000. Quantitative detection of dengue 2 virus using fluorogenic RT-PCR based on 3=-noncoding sequence. J Virol Methods 86:1-11. http://dx. doi. org/10. 1016/S0166-0934(99)00166-4.
    • (2000) J Virol Methods , vol.86 , pp. 1-11
    • Houng, H.H.1    Hritz, D.2    Kanesa-Thasan, N.3
  • 29
  • 33
    • 33645897975 scopus 로고    scopus 로고
    • Development of real-time reverse transcriptase PCR assays to detect and serotype dengue viruses
    • Chien LJ, Liao TL, Shu PY, Huang JH, Gubler DJ, Chang GJ. 2006. Development of real-time reverse transcriptase PCR assays to detect and serotype dengue viruses. J Clin Microbiol 44:1295-1304. http://dx. doi. org/10. 1128/JCM. 44. 4. 1295-1304. 2006.
    • (2006) J Clin Microbiol , vol.44 , pp. 1295-1304
    • Chien, L.J.1    Liao, T.L.2    Shu, P.Y.3    Huang, J.H.4    Gubler, D.J.5    Chang, G.J.6
  • 34
    • 0038519591 scopus 로고    scopus 로고
    • Development of group-and serotype-specific one-step SYBR green I-based real-time reverse transcription-PCR assay for dengue virus
    • Shu PY, Chang SF, Kuo YC, Yueh YY, Chien LJ, Sue CL, Lin TH, Huang JH. 2003. Development of group-and serotype-specific one-step SYBR green I-based real-time reverse transcription-PCR assay for dengue virus. J Clin Microbiol 41:2408-2416. http://dx. doi. org/10. 1128/JCM. 41.6. 2408-2416. 2003.
    • (2003) J Clin Microbiol , vol.41 , pp. 2408-2416
    • Shu, P.Y.1    Chang, S.F.2    Kuo, Y.C.3    Yueh, Y.Y.4    Chien, L.J.5    Sue, C.L.6    Lin, T.H.7    Huang, J.H.8
  • 35
    • 78449236917 scopus 로고    scopus 로고
    • 2nd international external quality control assessment for the molecular diagnosis of dengue infections
    • Domingo C, Niedrig M, Teichmann A, Kaiser M, Rumer L, Jarman RG, Donoso-Mantke O. 2010. 2nd international external quality control assessment for the molecular diagnosis of dengue infections. PLoS Negl Trop Dis 4:e833. http://dx. doi. org/10. 1371/journal. pntd. 0000833.
    • (2010) PLoS Negl Trop Dis , vol.4 , pp. e833
    • Domingo, C.1    Niedrig, M.2    Teichmann, A.3    Kaiser, M.4    Rumer, L.5    Jarman, R.G.6    Donoso-Mantke, O.7
  • 39
    • 42949170515 scopus 로고    scopus 로고
    • Molecular characterization of chikungunya virus from Andhra Pradesh, India & phylogenetic relationship with Central African isolates
    • Kumar C, Johnson AA, Gopal D. 2007. Molecular characterization of chikungunya virus from Andhra Pradesh, India & phylogenetic relationship with Central African isolates. Indian J Med Res 126:534.
    • (2007) Indian J Med Res , vol.126 , pp. 534
    • Kumar, C.1    Johnson, A.A.2    Gopal, D.3
  • 40
    • 84925357929 scopus 로고    scopus 로고
    • Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses
    • Cecilia D, Kakade M, Alagarasu K, Patil J, Salunke A, Parashar D, Shah P. 2015. Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses. Arch Virol 160: 323-327. http://dx. doi. org/10. 1007/s00705-014-2217-x.
    • (2015) Arch Virol , vol.160 , pp. 323-327
    • Cecilia, D.1    Kakade, M.2    Alagarasu, K.3    Patil, J.4    Salunke, A.5    Parashar, D.6    Shah, P.7


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