Establishment of a nanoparticle-assisted RT-PCR assay to distinguish field strains and attenuated strains of porcine epidemic diarrhea virus

Archives of Virology

Volumn 161, Issue 9, 2016, Pages 2543-2547

  Zhu, Yu ^a,b   Wang, Gui hua ^c   Cui, Yu dong ^b   Cui, Shang jin ^a,b  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b HEILONGJIANG AUGUST FIRST LAND RECLAMATION UNIVERSITY   (China)

^c Animal Medical Center DBN Technology Group   (China)

Author keywords

[No Author keywords available]

Indexed keywords

NANOPARTICLE; VIRAL PROTEIN; VIRUS VACCINE;

ANIMAL; CLASSIFICATION; CORONAVIRUS INFECTIONS; GENE EXPRESSION REGULATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MUTATION; PIG; PORCINE EPIDEMIC DIARRHEA VIRUS; PROCEDURES; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; VETERINARY; VIROLOGY;

ANIMALS; CORONAVIRUS INFECTIONS; GENE EXPRESSION REGULATION, VIRAL; MUTATION; NANOPARTICLES; PORCINE EPIDEMIC DIARRHEA VIRUS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SWINE; VIRAL PROTEINS; VIRAL VACCINES;

EID: 84973610908     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-016-2918-4     Document Type: Article

References (26)

1. Van Reeth K, Pensaert M (1994) Prevalence of infections with enzootic respiratory and enteric viruses in feeder pigs entering fattening herds. Vet Rec 135:594–597
2. Wood EN (1977) An apparently new syndrome of porcine epidemic diarrhoea. Vet Rec 100:243–244
3. Puranaveja S, Poolperm P, Lertwatcharasarakul P, Kesdaengsakonwut S, Boonsoongnern A, Urairong K, Kitikoon P, Choojai P, Kedkovid R, Teankum K, Thanawongnuwech R (2009) Chinese-like strain of porcine epidemic diarrheavirus, Thailand. Emerg Infect Dis 15:1112–1115
4. Sueyoshi M, Tsuda T, Yamazaki K, Yoshida K, Nakazawa M, Sato K, Minami T, Iwashita K, Watanabe M, Suzuki Y (1995) An immunohistochemical investigation of porcine epidemic diarrhoea. J Comp Pathol 113:59–67
5. Sun RQ, Cai RJ, Chen YQ, Liang PS, Chen DK, Song CX (2012) Outbreak of porcine epidemic diarrhea in suckling piglets, China. Emerg Infect Dis 18:161–163
6. Song D, Park B (2012) Porcine epidemic diarrhoea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines. Virus Genes 44:167–175
7. Cima G (2013) Fighting a deadly pig disease. Industry, veterinarians trying to contain PED virus, new to the US. J Am Vet Med Assoc 243:467–470
8. Chen Q, Li G, Stasko J, Thomas JT, Stensland WR, Pillatzki AE, Gauger PC, Schwartz KJ, Madson D, Yoon KJ, Stevenson GW, Burrough ER, Harmon KM, Main RG, Zhang J (2014) Isolation and characterization of porcine epidemic diarrhea viruses associated with the 2013 disease outbreak among swine in the US. J Clin Microbiol 52:234–243
9. Liu C, Tang J, Ma Y, Liang X, Yang Y, Peng G, Qi Q, Jiang S, Li J, Du L, Li F (2015) Receptor usage and cell entry of porcine epidemic diarrhea coronavirus. J Virol 89:6121–6125
10. Ren X, Li G, Liu B (2010) Binding characterization of determinants in porcine aminopeptidase N, the cellular receptor for transmissible gastroenteritis virus. J Biotechnol 150:202–206
11. Lu W, Zheng BJ, Xu K, Schwarz W, Du L, Wong CK, Chen J, Duan S, Deubel V, Sun B (2006) Severe acute respiratory syndrome-associated coronavirus 3a protein forms an ion channel and modulates virus release. Proc Natl Acad Sci USA 103:12540–12545
12. McGoldrick A, Lowings JP, Paton DJ (1999) Characterisation of a recent virulent transmissible gastroenteritis virus from Britain with a deleted ORF 3a. Arch Virol 144:763–770
13. Song DS, Yang JS, Oh JS, Han JH, Park BK (2003) Differentiation of a Vero cell adapted porcine epidemic diarrhea virus from Korean field strains by restriction fragment length polymorphism analysis of ORF 3. Vaccine 21:1833–1842
14. Wang K, Lu W, Chen J, Xie S, Shi H, Hsu H, Yu W, Xu K, Bian C, Fischer WB, Schwarz W, Feng L, Sun B (2012) PEDV ORF3 encodes an ion channel protein and regulates virus production. FEBS Lett 586:384–391
15. Park SJ, Kim HK, Song DS, Moon HJ, Park BK (2011) Molecular characterization and phylogenetic analysis of porcine epidemic diarrhea virus (PEDV) field isolates in Korea. Arch Virol 156:577–585
16. Kusanagi K, Kuwahara H, Katoh T, Nunoya T, Ishikawa Y, Samejima T, Tajima M (1992) Isolation and serial propagation of porcine epidemic diarrhea virus in cell cultures and partial characterization of the isolate. J Vet Med Sci 54:313–318
17. Gou H, Deng J, Wang J, Pei J, Liu W, Zhao M, Chen J (2015) Rapid and sensitive detection of porcine epidemic diarrhea virus by reverse transcription loop-mediated isothermal amplification combined with a vertical flow visualization strip. Mol Cell Probes 29:48–53
18. Miller LC, Crawford KK, Lager KM, Kellner SG, Brockmeier SL (2016) Evaluation of two real-time polymerase chain reaction assays for Porcine epidemic diarrhea virus (PEDV) to assess PEDV transmission in growing pigs. J Vet Diagn Invest 28:20–29
19. Jung K, Chae C (2004) Effect of temperature on the detection of porcine epidemic diarrhea virus and transmissible gastroenteritis virus in fecal samples by reverse transcription-polymerase chain reaction. J Vet Diagn Invest 16:237–239
20. Shen C, Yang W, Ji Q, Maki H, Dong A, Zhang Z (2009) NanoPCR observation: different levels of DNA replication fidelity in nanoparticle-enhanced polymerase chain reactions. Nanotechnology 20:455103
21. Jung K, Saif LJ (2015) Porcine epidemic diarrhea virus infection: Etiology, epidemiology, pathogenesis and immunoprophylaxis. Vet J 204:134–143
22. Chen J, Wang C, Shi H, Qiu H, Liu S, Chen X, Zhang Z, Feng L (2010) Molecular epidemiology of porcine epidemic diarrhea virus in China. Arch Virol 155:1471–1476
23. Li ZL, Zhu L, Ma JY, Zhou QF, Song YH, Sun BL, Chen RA, Xie QM, Bee YZ (2012) Molecular characterization and phylogenetic analysis of porcine epidemic diarrhea virus (PEDV) field strains in south China. Virus Genes 45:181–185
24. Ma X, Cui Y, Qiu Z, Zhang B, Cui S (2013) A nanoparticle-assisted PCR assay to improve the sensitivity for rapid detection and differentiation of wild-type pseudorabies virus and gene-deleted vaccine strains. J Virol Methods 193:374–378
25. Wang X, Bai A, Zhang J, Kong M, Cui Y, Ma X, Ai X, Tang Q, Cui S (2014) A new nanoPCR molecular assay for detection of porcine bocavirus. J Virol Methods 202:106–111
26. Yuan W, Li Y, Li P, Song Q, Li L, Sun J (2015) Development of a nanoparticle-assisted PCR assay for detection of porcine epidemic diarrhea virus. J Virol Methods 220:18–20