메뉴 건너뛰기




Volumn 90, Issue 11, 2016, Pages 5503-5513

Global genomic diversity of human papillomavirus 11 based on 433 isolates and 78 complete genome sequences

(37)  Jelen, Mateja M a   Chen, Zigui b   Kocjan, Boštjan J a   Hošnjak, Lea a   Burt, Felicity J c   Chan, Paul K S b   Chouhy, Diego d   Combrinck, Catharina E c   Estrade, Christine e   Fiander, Alison f   Garland, Suzanne M g,h,i   Giri, Adriana A d   González, Joaquín Víctor j   Gröning, Arndt k   Hibbitts, Sam f   Luk, Tommy N M l,m   Marinic, Karina n   Matsukura, Toshihiko o   Neumann, Anna k   Oštrbenk, Anja a   more..


Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; GENE DELETION; GENE INSERTION; GENE SEQUENCE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HUMAN PAPILLOMAVIRUS TYPE 11; MAXIMUM LIKELIHOOD METHOD; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SINGLE NUCLEOTIDE POLYMORPHISM; VIRUS GENOME; VIRUS ISOLATION; CLASSIFICATION; GENETIC VARIATION; GENETICS; GENOMICS; GENOTYPE; HIGH THROUGHPUT SEQUENCING; HUMAN; ISOLATION AND PURIFICATION; MOLECULAR EVOLUTION; PAPILLOMAVIRUS INFECTION; STATISTICAL MODEL; VIROLOGY;

EID: 84971440681     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.03149-15     Document Type: Article
Times cited : (19)

References (51)
  • 1
    • 8844260377 scopus 로고    scopus 로고
    • Recurrent respiratory papillomatosis: a longitudinal study comparing severity associated with human papilloma viral types 6 and 11 and other risk factors in a large pediatric population
    • Wiatrak BJ, Wiatrak DW, Broker TR, Lewis L. 2004. Recurrent respiratory papillomatosis: a longitudinal study comparing severity associated with human papilloma viral types 6 and 11 and other risk factors in a large pediatric population. Laryngoscope 114(Suppl 104):1-23. http://dx.doi.org/10.1097/01.mlg.000148224.83491.0f.
    • (2004) Laryngoscope , vol.114 , pp. 1-23
    • Wiatrak, B.J.1    Wiatrak, D.W.2    Broker, T.R.3    Lewis, L.4
  • 3
    • 65649141194 scopus 로고    scopus 로고
    • Natural history of genital warts: analysis of the placebo arm of 2 randomized phase III trials of a quadrivalent HPV (types 6, 11, 16, 18) vaccine
    • Garland SM, Steben M, Sings HL, James M, Lu S, Railkar R, Barr E, Haupt RM, Joura EA. 2009. Natural history of genital warts: analysis of the placebo arm of 2 randomized phase III trials of a quadrivalent HPV (types 6, 11, 16, 18) vaccine. J Infect Dis 119:805-814. http://dx.doi.org/10.1086/597071.
    • (2009) J Infect Dis , vol.119 , pp. 805-814
    • Garland, S.M.1    Steben, M.2    Sings, H.L.3    James, M.4    Lu, S.5    Railkar, R.6    Barr, E.7    Haupt, R.M.8    Joura, E.A.9
  • 4
    • 77950938389 scopus 로고    scopus 로고
    • Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments
    • Bernard HU, Burk RD, Chen Z, van Doorslaer K, Zur Hausen H, de Villiers EM. 2010. Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments. Virology 401:70-79. http://dx.doi.org/10.1016/j.virol.2010.02.002.
    • (2010) Virology , vol.401 , pp. 70-79
    • Bernard, H.U.1    Burk, R.D.2    Chen, Z.3    van Doorslaer, K.4    Zur Hausen, H.5    de Villiers, E.M.6
  • 5
    • 84873056862 scopus 로고    scopus 로고
    • Human papillomavirus and diseases of the upper airway: head and neck cancer and respiratory papillomatosis
    • Gillison M, Alemany L, Snjiders PJF, Chaturvedi A, Steinberg BM, Schwartz S, Castellsague X. 2012. Human papillomavirus and diseases of the upper airway: head and neck cancer and respiratory papillomatosis. Vaccine 30(Suppl 5):F34-F54. http://dx.doi.org/10.1016/j.vaccine.2012.05.070.
    • (2012) Vaccine , vol.30 , pp. F34-F54
    • Gillison, M.1    Alemany, L.2    Snjiders, P.J.F.3    Chaturvedi, A.4    Steinberg, B.M.5    Schwartz, S.6    Castellsague, X.7
  • 6
    • 84862654119 scopus 로고    scopus 로고
    • Tumor-specific and gender-specific pre-vaccination distribution of human papillomavirus types 6 and 11 in anogenital warts and laryngeal papillomas: a study on 574 tissue specimens
    • Komloš KF, Kocjan BJ, Košorok P, Luzar B, Meglič L, Potočnik M, Hočevar-Boltežar I, Gale N, Seme K, Poljak M. 2012. Tumor-specific and gender-specific pre-vaccination distribution of human papillomavirus types 6 and 11 in anogenital warts and laryngeal papillomas: a study on 574 tissue specimens. J Med Virol 84:1233-1241. http://dx.doi.org/10.1002/jmv.23318.
    • (2012) J Med Virol , vol.84 , pp. 1233-1241
    • Komloš, K.F.1    Kocjan, B.J.2    Košorok, P.3    Luzar, B.4    Meglič, L.5    Potočnik, M.6    Hočevar-Boltežar, I.7    Gale, N.8    Seme, K.9    Poljak, M.10
  • 7
    • 84877858522 scopus 로고    scopus 로고
    • Human papillomavirus type 6 and 11 genetic variants found in 71 oral and anogenital epithelial samples from Australia
    • Danielewski JA, Garland SM, McCloskey J, Hillman RJ, Tabrizi SN. 2013. Human papillomavirus type 6 and 11 genetic variants found in 71 oral and anogenital epithelial samples from Australia. PLoS One 8:e63892. http://dx.doi.org/10.1371/journal.pone.0063892.
    • (2013) PLoS One , vol.8
    • Danielewski, J.A.1    Garland, S.M.2    McCloskey, J.3    Hillman, R.J.4    Tabrizi, S.N.5
  • 12
    • 48949116026 scopus 로고    scopus 로고
    • Human papillomavirus genotype distribution in low-grade squamous intraepithelial lesions in France and comparison with CIN2/3 and invasive cervical cancer-the EDiTH III study
    • Prétet J-C, Jacquard A-C, Saunier M, Clavel C, Dachez R, Gondry J, Pradat P, Soubeyrand B, Leocmach Y, Mougin C, Riethmuller D. 2008. Human papillomavirus genotype distribution in low-grade squamous intraepithelial lesions in France and comparison with CIN2/3 and invasive cervical cancer-the EDiTH III study. Gynecol Oncol 110:179-184. http://dx.doi.org/10.1016/j.ygyno.2008.04.012.
    • (2008) Gynecol Oncol , vol.110 , pp. 179-184
    • Prétet, J.-C.1    Jacquard, A.-C.2    Saunier, M.3    Clavel, C.4    Dachez, R.5    Gondry, J.6    Pradat, P.7    Soubeyrand, B.8    Leocmach, Y.9    Mougin, C.10    Riethmuller, D.11
  • 13
    • 84884354995 scopus 로고    scopus 로고
    • A systematic review of the prevalence of mucosal and cutaneous human papillomavirus types
    • Bzhalava D, Guan P, Franceschi S, Dillner J, Clifford G. 2013. A systematic review of the prevalence of mucosal and cutaneous human papillomavirus types. Virology 445:224-231. http://dx.doi.org/10.1016/j.virol.2013.07.015.
    • (2013) Virology , vol.445 , pp. 224-231
    • Bzhalava, D.1    Guan, P.2    Franceschi, S.3    Dillner, J.4    Clifford, G.5
  • 14
    • 0025900838 scopus 로고
    • Squamous cell carcinoma of the lung in a nonsmoking, nonirradiated patient with juvenile laryngotracheal papillomatosis. Evidence of human papillomavirus-11 DNA in both carcinoma and papillomas
    • Guillou L, Sahli R, Chaubert P, Monnier P, Cuttat JF, Costa J. 1991. Squamous cell carcinoma of the lung in a nonsmoking, nonirradiated patient with juvenile laryngotracheal papillomatosis. Evidence of human papillomavirus-11 DNA in both carcinoma and papillomas. Am J Surg Pathol 15:891-898.
    • (1991) Am J Surg Pathol , vol.15 , pp. 891-898
    • Guillou, L.1    Sahli, R.2    Chaubert, P.3    Monnier, P.4    Cuttat, J.F.5    Costa, J.6
  • 15
    • 81755184429 scopus 로고    scopus 로고
    • Sinonasal inverted papilloma associated with squamous cell carcinoma
    • But-Hadžič J, Jenko K, Poljak M, Kocjan BJ, Gale N, Strojan P. 2011. Sinonasal inverted papilloma associated with squamous cell carcinoma. Radiol Oncol 45:267-272. http://dx.doi.org/10.2478/v10019-011-0033-4.
    • (2011) Radiol Oncol , vol.45 , pp. 267-272
    • But-Hadžič, J.1    Jenko, K.2    Poljak, M.3    Kocjan, B.J.4    Gale, N.5    Strojan, P.6
  • 16
    • 79957626553 scopus 로고    scopus 로고
    • Recurrent respiratory papillomatosis: a rare chronic disease, difficult to treat, with potential to lung cancer transformation: apropos of two cases and a brief literature review
    • Katsenos S, Becker HD. 2011. Recurrent respiratory papillomatosis: a rare chronic disease, difficult to treat, with potential to lung cancer transformation: apropos of two cases and a brief literature review. Case Rep Oncol 4:162-171. http://dx.doi.org/10.1159/000327094.
    • (2011) Case Rep Oncol , vol.4 , pp. 162-171
    • Katsenos, S.1    Becker, H.D.2
  • 18
    • 84882638489 scopus 로고    scopus 로고
    • Anal and perianal squamous carcinomas and highgrade intraepithelial lesions exclusively associated with "low-risk" HPV genotypes 6 and 11
    • Cornall AM, Roberts JM, Garland SM, Hillman RJ, Grulich AE, Tabrizi SN. 2013. Anal and perianal squamous carcinomas and highgrade intraepithelial lesions exclusively associated with "low-risk" HPV genotypes 6 and 11. Int J Cancer 133:2253-2258. http://dx.doi.org/10.1002/ijc.28228.
    • (2013) Int J Cancer , vol.133 , pp. 2253-2258
    • Cornall, A.M.1    Roberts, J.M.2    Garland, S.M.3    Hillman, R.J.4    Grulich, A.E.5    Tabrizi, S.N.6
  • 19
    • 84885604178 scopus 로고    scopus 로고
    • Genomic differences in the background of different severity in juvenile-onset respiratory papillomatoses associated with human papillomavirus type 11
    • Gáll T, Kis A, Tatár TZ, Kardos G, Gergely L, Szarka K. 2013. Genomic differences in the background of different severity in juvenile-onset respiratory papillomatoses associated with human papillomavirus type 11. Med Microbiol Immunol 202:353-363. http://dx.doi.org/10.1007/s00430-013-0297-y.
    • (2013) Med Microbiol Immunol , vol.202 , pp. 353-363
    • Gáll, T.1    Kis, A.2    Tatár, T.Z.3    Kardos, G.4    Gergely, L.5    Szarka, K.6
  • 20
    • 84880758813 scopus 로고    scopus 로고
    • Laser capture microdissection shows HPV11 as both a causal and a coincidental infection in cervical cancer specimens with multiple HPV types
    • Guimerà N, Lloveras B, Alemany L, Iljazovic E, Shin HR, Jung-Il S, de Sanjose S, Jenkins D, Bosch FX, Quint W. 2013. Laser capture microdissection shows HPV11 as both a causal and a coincidental infection in cervical cancer specimens with multiple HPV types. Histopathology 63: 287-292. http://dx.doi.org/10.1111/his.12137.
    • (2013) Histopathology , vol.63 , pp. 287-292
    • Guimerà, N.1    Lloveras, B.2    Alemany, L.3    Iljazovic, E.4    Shin, H.R.5    Jung-Il, S.6    de Sanjose, S.7    Jenkins, D.8    Bosch, F.X.9    Quint, W.10
  • 21
    • 84902302610 scopus 로고    scopus 로고
    • A case of recurrent respiratory papillomatosis with malignant transformation, HPV11 DNAemia, high L1 antibody titre and a fatal papillary endocardial lesion
    • Mauz PS, Zago M, Kurth R, Pawlita M, Holderried M, Thiericke J, Iftner A, Stubenrauch F, Sotlar K, Iftner T. 2014. A case of recurrent respiratory papillomatosis with malignant transformation, HPV11 DNAemia, high L1 antibody titre and a fatal papillary endocardial lesion. Virol J 11:114. http://dx.doi.org/10.1186/1743-422X-11-114.
    • (2014) Virol J , vol.11 , pp. 114
    • Mauz, P.S.1    Zago, M.2    Kurth, R.3    Pawlita, M.4    Holderried, M.5    Thiericke, J.6    Iftner, A.7    Stubenrauch, F.8    Sotlar, K.9    Iftner, T.10
  • 22
    • 84928989871 scopus 로고    scopus 로고
    • Ongoing decline in genital warts among young heterosexuals 7 years after the Australian human papillomavirus (HPV) vaccination programme
    • Chow EPF, Read TRH, Wigan R, Donovan B, Chen MY, Bradshaw CS, Fairley CK. 2015. Ongoing decline in genital warts among young heterosexuals 7 years after the Australian human papillomavirus (HPV) vaccination programme. Sex Transm Infect 91:214-219. http://dx.doi.org/10.1136/sextrans-2014-051813.
    • (2015) Sex Transm Infect , vol.91 , pp. 214-219
    • Chow, E.P.F.1    Read, T.R.H.2    Wigan, R.3    Donovan, B.4    Chen, M.Y.5    Bradshaw, C.S.6    Fairley, C.K.7
  • 25
    • 78851471925 scopus 로고    scopus 로고
    • Prevaccination genomic diversity of human papillomavirus genotype 11: a study on 63 clinical isolates and 10 full-length genome sequences
    • Maver PJ, Kocjan BJ, Seme K, Potočnik M, Gale N, Poljak M. 2011. Prevaccination genomic diversity of human papillomavirus genotype 11: a study on 63 clinical isolates and 10 full-length genome sequences. J Med Virol 83:461-470. http://dx.doi.org/10.1002/jmv.21994.
    • (2011) J Med Virol , vol.83 , pp. 461-470
    • Maver, P.J.1    Kocjan, B.J.2    Seme, K.3    Potočnik, M.4    Gale, N.5    Poljak, M.6
  • 26
    • 83755178892 scopus 로고    scopus 로고
    • Classification and nomenclature system for human alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and HPV11 isolates to variant lineages
    • Burk RD, Chen Z, Harari A, Smith BC, Kocjan BJ, Maver PJ, Poljak M. 2011. Classification and nomenclature system for human alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and HPV11 isolates to variant lineages. Acta Dermatovenerol Alp Panonica Adriat 20:113-123.
    • (2011) Acta Dermatovenerol Alp Panonica Adriat , vol.20 , pp. 113-123
    • Burk, R.D.1    Chen, Z.2    Harari, A.3    Smith, B.C.4    Kocjan, B.J.5    Maver, P.J.6    Poljak, M.7
  • 31
    • 80054867486 scopus 로고    scopus 로고
    • Virological failure of intralesional cidofovir therapy in recurrent respiratory papillomatosis is not associated with genetic or epigenetic changes of HPV11: complete genome comparison of sequential isolates
    • Gáll T, Kis A, Fehér E, Gergely L, Szarka K. 2011. Virological failure of intralesional cidofovir therapy in recurrent respiratory papillomatosis is not associated with genetic or epigenetic changes of HPV11: complete genome comparison of sequential isolates. Antiviral Res 92:356-358. http://dx.doi.org/10.1016/j.antiviral.2011.09.007.
    • (2011) Antiviral Res , vol.92 , pp. 356-358
    • Gáll, T.1    Kis, A.2    Fehér, E.3    Gergely, L.4    Szarka, K.5
  • 33
    • 84997610347 scopus 로고    scopus 로고
    • Divergent human papillomavirus associated with recurrent respiratory papillomatosis with lung involvement
    • Yuan H, Zhou D, Wang J, Schlegel R. 2013. Divergent human papillomavirus associated with recurrent respiratory papillomatosis with lung involvement. Genome Announc 1(4):e00474-13. http://dx.doi.org/10.1128/genomeA.00474-13.
    • (2013) Genome Announc , vol.1 , Issue.4
    • Yuan, H.1    Zhou, D.2    Wang, J.3    Schlegel, R.4
  • 35
    • 77955019084 scopus 로고    scopus 로고
    • Parallelization of the MAFFT multiple sequence alignment program
    • Katoh K, Toh H. 2010. Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics 26:1899-1900. http://dx.doi.org/10.1093/bioinformatics/btq224.
    • (2010) Bioinformatics , vol.26 , pp. 1899-1900
    • Katoh, K.1    Toh, H.2
  • 36
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
    • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312-1313. http://dx.doi.org/10.1093/bioinformatics/btu033.
    • (2014) Bioinformatics , vol.30 , pp. 1312-1313
    • Stamatakis, A.1
  • 38
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 40
    • 10044270097 scopus 로고    scopus 로고
    • Mucosal human papillomaviruses encode four different E5 proteins whose chemistry and phylogeny correlate with malignant or benign growth
    • Bravo IG, Alonso A. 2004. Mucosal human papillomaviruses encode four different E5 proteins whose chemistry and phylogeny correlate with malignant or benign growth. J Virol 78:13613-13626. http://dx.doi.org/10.1128/JVI.78.24.13613-13626.2004.
    • (2004) J Virol , vol.78 , pp. 13613-13626
    • Bravo, I.G.1    Alonso, A.2
  • 41
    • 84884357300 scopus 로고    scopus 로고
    • Evolution of the Papillomaviridae
    • Van Doorslaer K. 2013. Evolution of the Papillomaviridae. Virology 445: 11-20. http://dx.doi.org/10.1016/j.virol.2013.05.012.
    • (2013) Virology , vol.445 , pp. 11-20
    • Van Doorslaer, K.1
  • 42
    • 84884355784 scopus 로고    scopus 로고
    • Human papillomavirus genome variants
    • Burk RD, Harari A, Chen Z. 2013. Human papillomavirus genome variants. Virology 445:232-243. http://dx.doi.org/10.1016/j.virol.2013.07.018.
    • (2013) Virology , vol.445 , pp. 232-243
    • Burk, R.D.1    Harari, A.2    Chen, Z.3
  • 43
    • 79957584490 scopus 로고    scopus 로고
    • Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67
    • Chen Z, Schiffman M, Herrero R, Desalle R, Anastos K, Segondy M, Sahasrabuddhe VV, Gravitt PE, Hsing AW, Burk RD. 2011. Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67. PLoS One 6:e20183. http://dx.doi.org/10.1371/journal.pone.0020183.
    • (2011) PLoS One , vol.6
    • Chen, Z.1    Schiffman, M.2    Herrero, R.3    Desalle, R.4    Anastos, K.5    Segondy, M.6    Sahasrabuddhe, V.V.7    Gravitt, P.E.8    Hsing, A.W.9    Burk, R.D.10
  • 46
    • 84920921122 scopus 로고    scopus 로고
    • Human papillomavirus genomics: past, present and future
    • Harari A, Chen Z, Burk RD. 2014. Human papillomavirus genomics: past, present and future. Curr Probl Dermatol 45:1-18. http://dx.doi.org/10.1159/000355952.
    • (2014) Curr Probl Dermatol , vol.45 , pp. 1-18
    • Harari, A.1    Chen, Z.2    Burk, R.D.3
  • 48
    • 59749083343 scopus 로고    scopus 로고
    • Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97
    • Chen Z, DeSalle R, Schiffman M, Herrero R, Burk RD. 2009. Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97. J Virol 83:1443-1455. http://dx.doi.org/10.1128/JVI.02068-08.
    • (2009) J Virol , vol.83 , pp. 1443-1455
    • Chen, Z.1    DeSalle, R.2    Schiffman, M.3    Herrero, R.4    Burk, R.D.5
  • 49
    • 0027442128 scopus 로고
    • The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations
    • Ho L, Chan SY, Burk RD, Das BC, Fujinaga K, Icenogle JP, Kahn T, Kiviat N, Lancaster W, Mavromara-Nazos P. 1993. The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations. J Virol 67:6413-6423.
    • (1993) J Virol , vol.67 , pp. 6413-6423
    • Ho, L.1    Chan, S.Y.2    Burk, R.D.3    Das, B.C.4    Fujinaga, K.5    Icenogle, J.P.6    Kahn, T.7    Kiviat, N.8    Lancaster, W.9    Mavromara-Nazos, P.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.