-
1
-
-
84879890360
-
Comprehensive molecular characterization of clear cell renal cell carcinoma
-
Cancer Genome Atlas Research N
-
Cancer Genome Atlas Research N (2013) Comprehensive molecular characterization of clear cell renal cell carcinoma. Nature 499: 43-49.
-
(2013)
Nature
, vol.499
, pp. 43-49
-
-
-
2
-
-
77951115122
-
International network of cancer genome projects
-
International Cancer Genome Consortium
-
International Cancer Genome Consortium (2010) International network of cancer genome projects. Nature 464: 993-998.
-
(2010)
Nature
, vol.464
, pp. 993-998
-
-
-
3
-
-
84884994218
-
The cancer genome atlas pan-cancer analysis project
-
Cancer Genome Atlas Research R
-
Cancer Genome Atlas Research N, Weinstein JN, Collisson EA, Mills GB, Shaw KR, et al. (2013) The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet 45: 1113-1120.
-
(2013)
Nat Genet
, vol.45
, pp. 1113-1120
-
-
Weinstein, J.N.1
Collisson, E.A.2
Mills, G.B.3
Shaw, K.R.4
-
4
-
-
84885074034
-
The somatic genomic landscape of glioblastoma
-
Brennan CW, Verhaak RG, McKenna A, Campos B, Noushmehr H, et al. (2013) The somatic genomic landscape of glioblastoma. Cell 155: 462-477.
-
(2013)
Cell
, vol.155
, pp. 462-477
-
-
Brennan, C.W.1
Verhaak, R.G.2
McKenna, A.3
Campos, B.4
Noushmehr, H.5
-
5
-
-
80053950209
-
Association of BRCA1 and BRCA2 mutations with survival, chemotherapy sensitivity, and gene mutator phenotype in patients with ovarian cancer
-
Yang D, Khan S, Sun Y, Hess K, Shmulevich I, et al. (2011) Association of BRCA1 and BRCA2 mutations with survival, chemotherapy sensitivity, and gene mutator phenotype in patients with ovarian cancer. JAMA 306: 1557-1565.
-
(2011)
JAMA
, vol.306
, pp. 1557-1565
-
-
Yang, D.1
Khan, S.2
Sun, Y.3
Hess, K.4
Shmulevich, I.5
-
6
-
-
84880507665
-
Mutational heterogeneity in cancer and the search for new cancer-associated genes
-
Lawrence MS, Stojanov P, Polak P, Kryukov GV, Cibulskis K, et al. (2013) Mutational heterogeneity in cancer and the search for new cancer-associated genes. Nature 499: 214-218.
-
(2013)
Nature
, vol.499
, pp. 214-218
-
-
Lawrence, M.S.1
Stojanov, P.2
Polak, P.3
Kryukov, G.V.4
Cibulskis, K.5
-
7
-
-
84890485602
-
Athena: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network
-
Kim D, Li R, Dudek SM, Ritchie MD (2013) ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network. BioData Min 6: 23.
-
(2013)
BioData Min
, vol.6
, pp. 23
-
-
Kim, D.1
Li, R.2
Dudek, S.M.3
Ritchie, M.D.4
-
8
-
-
84875490185
-
Cancer genome landscapes
-
Vogelstein B, Papadopoulos N, Velculescu VE, Zhou S, Diaz LA, Jr., et al. (2013) Cancer genome landscapes. Science 339: 1546-1558.
-
(2013)
Science
, vol.339
, pp. 1546-1558
-
-
Vogelstein, B.1
Papadopoulos, N.2
Velculescu, V.E.3
Zhou, S.4
Diaz, L.A.5
-
9
-
-
84877327584
-
BioBin: A bioinformatics tool for automating the binning of rare variants using publicly available biological knowledge
-
Moore CB, Wallace JR, Frase AT, Pendergrass SA, Ritchie MD (2013) BioBin: a bioinformatics tool for automating the binning of rare variants using publicly available biological knowledge. BMC Med Genomics 6 Suppl 2: S6.
-
(2013)
BMC Med Genomics
, vol.6
, pp. S6
-
-
Moore, C.B.1
Wallace, J.R.2
Frase, A.T.3
Pendergrass, S.A.4
Ritchie, M.D.5
-
10
-
-
84892707535
-
Low frequency variants, collapsed based on biological knowledge, uncover complexity of population stratification in 1000 genomes project data
-
Moore CB, Wallace JR, Wolfe DJ, Frase AT, Pendergrass SA, et al. (2013) Low frequency variants, collapsed based on biological knowledge, uncover complexity of population stratification in 1000 genomes project data. PLoS Genet 9: e1003959.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003959
-
-
Moore, C.B.1
Wallace, J.R.2
Wolfe, D.J.3
Frase, A.T.4
Pendergrass, S.A.5
-
11
-
-
84891368992
-
Genomic analyses with biofilter 2.0: Knowledge driven filtering, annotation, and model development
-
Pendergrass SA, Frase A, Wallace J, Wolfe D, Katiyar N, et al. (2013) Genomic analyses with biofilter 2.0: knowledge driven filtering, annotation, and model development. BioData Min 6: 25.
-
(2013)
BioData Min
, vol.6
, pp. 25
-
-
Pendergrass, S.A.1
Frase, A.2
Wallace, J.3
Wolfe, D.4
Katiyar, N.5
-
13
-
-
0034973569
-
Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer
-
Ritchie MD, Hahn LW, Roodi N, Bailey LR, Dupont WD, et al. (2001) Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer. Am J Hum Genet 69: 138-147.
-
(2001)
Am J Hum Genet
, vol.69
, pp. 138-147
-
-
Ritchie, M.D.1
Hahn, L.W.2
Roodi, N.3
Bailey, L.R.4
Dupont, W.D.5
-
14
-
-
0642368712
-
Optimization of neural network architecture using genetic programming improves detection and modeling of gene-gene interactions in studies of human diseases
-
Ritchie MD, White BC, Parker JS, Hahn LW, Moore JH (2003) Optimization of neural network architecture using genetic programming improves detection and modeling of gene-gene interactions in studies of human diseases. BMC Bioinformatics 4: 28.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 28
-
-
Ritchie, M.D.1
White, B.C.2
Parker, J.S.3
Hahn, L.W.4
Moore, J.H.5
-
15
-
-
43249108568
-
Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology
-
Motsinger-Reif AA, Dudek SM, Hahn LW, Ritchie MD (2008) Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology. Genet Epidemiol 32: 325-340.
-
(2008)
Genet Epidemiol
, vol.32
, pp. 325-340
-
-
Motsinger-Reif, A.A.1
Dudek, S.M.2
Hahn, L.W.3
Ritchie, M.D.4
-
16
-
-
77957171378
-
Athena: A knowledge-based hybrid backpropagation-grammatical evolution neural network algorithm for discovering epistasis among quantitative trait Loci
-
Turner SD, Dudek SM, Ritchie MD (2010) ATHENA: A knowledge-based hybrid backpropagation-grammatical evolution neural network algorithm for discovering epistasis among quantitative trait Loci. BioData Min 3: 5.
-
(2010)
BioData Min
, vol.3
, pp. 5
-
-
Turner, S.D.1
Dudek, S.M.2
Ritchie, M.D.3
-
17
-
-
33750935113
-
Genetic programming neural networks: A powerful bioinformatics tool for human genetics
-
Ritchie MD, Motsinger AA, Bush WS, Coffey CS, Moore JH (2007) Genetic Programming Neural Networks: A Powerful Bioinformatics Tool for Human Genetics. Appl Soft Comput 7: 471-479.
-
(2007)
Appl Soft Comput
, vol.7
, pp. 471-479
-
-
Ritchie, M.D.1
Motsinger, A.A.2
Bush, W.S.3
Coffey, C.S.4
Moore, J.H.5
-
19
-
-
84938669465
-
Goodness-of-fit criteria for survival data
-
Müller M (2004) Goodness-of-fit criteria for survival data. Sonderforschungsbereich Paper 382.
-
(2004)
Sonderforschungsbereich Paper
, vol.382
-
-
Müller, M.1
-
20
-
-
33749238874
-
The von hippel-lindau tumor suppressor gene product represses oncogenic beta-catenin signaling in renal carcinoma cells
-
Peruzzi B, Athauda G, Bottaro DP (2006) The von Hippel-Lindau tumor suppressor gene product represses oncogenic beta-catenin signaling in renal carcinoma cells. Proc Natl Acad Sci U S A 103: 14531-14536.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 14531-14536
-
-
Peruzzi, B.1
Athauda, G.2
Bottaro, D.P.3
-
21
-
-
33845631556
-
Pathway analysis of kidney cancer using proteomics and metabolic profiling
-
Perroud B, Lee J, Valkova N, Dhirapong A, Lin PY, et al. (2006) Pathway analysis of kidney cancer using proteomics and metabolic profiling. Mol Cancer 5: 64.
-
(2006)
Mol Cancer
, vol.5
, pp. 64
-
-
Perroud, B.1
Lee, J.2
Valkova, N.3
Dhirapong, A.4
Lin, P.Y.5
-
22
-
-
35648936526
-
Tumor necrosis factor alpha as a new target for renal cell carcinoma: Two sequential phase II trials of infliximab at standard and high dose
-
Harrison ML, Obermueller E, Maisey NR, Hoare S, Edmonds K, et al. (2007) Tumor necrosis factor alpha as a new target for renal cell carcinoma: two sequential phase II trials of infliximab at standard and high dose. J Clin Oncol 25: 4542-4549.
-
(2007)
J Clin Oncol
, vol.25
, pp. 4542-4549
-
-
Harrison, M.L.1
Obermueller, E.2
Maisey, N.R.3
Hoare, S.4
Edmonds, K.5
-
23
-
-
33751017087
-
Aberrant promoter methylation of the ABCG2 gene in renal carcinoma
-
To KK, Zhan Z, Bates SE (2006) Aberrant promoter methylation of the ABCG2 gene in renal carcinoma. Mol Cell Biol 26: 8572-8585.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 8572-8585
-
-
To, K.K.1
Zhan, Z.2
Bates, S.E.3
-
24
-
-
71149090166
-
Epigenetic control of the ubiquitin carboxyl terminal hydrolase 1 in renal cell carcinoma
-
Seliger B, Handke D, Schabel E, Bukur J, Lichtenfels R, et al. (2009) Epigenetic control of the ubiquitin carboxyl terminal hydrolase 1 in renal cell carcinoma. J Transl Med 7: 90.
-
(2009)
J Transl Med
, vol.7
, pp. 90
-
-
Seliger, B.1
Handke, D.2
Schabel, E.3
Bukur, J.4
Lichtenfels, R.5
-
25
-
-
84862988411
-
BAP1 loss defines a new class of renal cell carcinoma
-
Pena-Llopis S, Vega-Rubin-de-Celis S, Liao A, Leng N, Pavia-Jimenez A, et al. (2012) BAP1 loss defines a new class of renal cell carcinoma. Nat Genet 44: 751-759.
-
(2012)
Nat Genet
, vol.44
, pp. 751-759
-
-
Pena-Llopis, S.1
Vega-Rubin-De-Celis, S.2
Liao, A.3
Leng, N.4
Pavia-Jimenez, A.5
|