Aspergillus section Versicolores: Nine new species and multilocus DNA sequence based phylogeny

IMA Fungus

Volumn 3, Issue 1, 2012, Pages 59-79

  Jurjevic, Zeljko ^a   Peterson, Stephen W ^b   Horn, Bruce W ^c  

^a EMSL Analytical Inc   (United States)

^b NATIONAL CENTER FOR AGRICULTURAL UTILIZATION RESEARCH   (United States)

^c NATIONAL PEANUT RESEARCH LABORATORY   (United States)

Author keywords

Aspergillus amoenus; Aspergillus austroafricanus; Aspergillus creber; Aspergillus cvjetkovicii; Aspergillus fructus; Aspergillus jensenii; Aspergillus protuberus; Aspergillus puulaauensis; Aspergillus subversicolor; Aspergillus sydowii; Aspergillus tabacinus; Aspergillus tennesseensis; Aspergillus venenatus; Aspergillus versicolor; Concordance analysis; Phylogeny; Systematics

Indexed keywords

EID: 84969379082     PISSN: 22106340     EISSN: 22106359     Source Type: Journal    
DOI: 10.5598/imafungus.2012.03.01.07     Document Type: Article

References (57)

1. Amend AS, Seifert KA, Samson R, Bruns TD (2010) Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics. Proceedings of the National Academy of Sciences, USA 107: 13748-13753
2. Anderson B, Frisvad JC, Sondergaard I, Rasmussen IB, Larsen LS (2011) Associations between fungal species and water-damaged building materials. Applied and Environmental Microbiology 77: 4180-4188
3. Baddley JW, Marr KA, Andes DR, Walsh TJ, Kauffman CA, Kontoyiannis DP, Ito JI, Balajee SA, Pappas PG, Moser SA (2009) Patterns of susceptibility of Aspergillus isolates recovered from patients enrolled in the transplant-associated infection surveillance network. Journal of Clinical Microbiology 47: 3271-3275
4. Baum DA, Shaw KL (1995) Genealogical perspectives on the species problem. In: Experimental and Molecular Approaches to Plant Biosystematics (PC Hoch & AG Stephenson, eds): 289-303. St Louis. Mo: Missouri Botanical Garden
5. Begerow D, Nilsson H, Unterseher M, Maier W. (2010) Current state and perspectives of fungal DNA barcoding and rapid identification procedures. Applied Microbiology and Biotechnology 87: 99-108
6. Dean TR, Roop B, Betancourt D, Menetrez MY (2005) A simple multiplex polymerase chain reaction assay for the identification of four environmentally relevant fungal contaminants. Journal of Microbiological Methods 61: 9-16
7. Dettman JR Jacobson DJ, Turner E, Pringle A, Taylor JW (2003) Reproductive isolation and phylogenetic divergence in Neurospora: comparing methods of species recognition in a model eukaryote. Evolution 57: 2721-2741
8. Domsch KH, Gams W, Anderson TH (1980) Compendium of Soil Fungi Vol. 1. Academic Press, UK
9. Edmondson DA, Barrios CS, Brasel TL, Straus DC, Kurup VP, Fink JN (2009) Immune response among patients exposed to molds. International Journal of Molecular Sciences 10: 5471-5484
10. Engelhart S, Loock A, Skutlarek D, Sagunski H, Lommel A, Farber H, Exner M (2002) Occurrence of toxigenic Aspergillus versicolor isolates and sterigmatocystin in carpet dust from damp indoor environments. Applied and Environmental Microbiology 68: 3886-3890
11. Finefield JM, Sherman DH, Tsukamoto S, Williams RM (2011) Studies on the biosynthesis of the notoamides: synthesis of an isotopomer of 6-hydroxydeoxybrevianamide E and biosynthetic incorporation into notoamide J. Journal of Organic Chemistry 76: 5954-5958
12. Galagan JE, Calvo SE, Cuomo C, Ma L-J, Wortman JR, Batzoglou S, Lee S-I, Batürkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Peñalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW (2005) Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438: 1105-1115
13. Gams W, Christensen M, Onions AHS, Pitt JI, Samson RA (1985) Infrageneric taxa of Aspergillus. In: Advances in Penicillium and Aspergillus Systematics (RA Samson & JI Pitt, eds): 55-64. New York: Plenum Press
14. Hennig W (1966) Phylogenetic Systematics. [English translation.] Urbana, IL: University of Illinois Press
15. Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755
16. Jiao P, Murdur SV, Gloer JB, Wicklow DT (2007) Kipukasins, nucleoside derivatives from Aspergillus versicolor. Journal of Natural Products 70: 1308-1311
17. Jussila J (2003) Inflammatory Responses in Mice after Intratracheal Instillation of Microbes Isolated from Moldy Buildings. Helsinki, Finland: National Public Health Institute
18. Kis-Papo T, Kirzhner V, Wasser SP, Nevo, E (2003) Evolution of genomic diversity and sex at extreme environments: fungal life under hypersaline Dead Sea stress. Proceedings of the National Academy of Sciences, USA 100: 14970-14975
19. Klich MA (1993) Morphological studies of Aspergillus section Versicolor and related species. Mycologia 85: 100-107
20. Klich MA (2002) Identification of Common Aspergillus Species. Utrecht: Centraalbureau voor Schimmelcultures
21. Klich MA, Pitt JI (1988) A Laboratory Guide to Common Aspergillus Species and Their Teleomorphs. North Ryde, NSW: CSIRO
22. Kozakiewicz Z (1989) Aspergillus species on stored products. Mycological Papers 161: 1-188
23. Kurtzman CP, Horn BW, Hesseltine CW (1987) Aspergillus nomius, a new aflatoxin-producing species related to Aspergillus flavus and Aspergillus tamarii. Antonie van Leeuwenhoek 53: 147-158
24. Lee YM, Dang HT, Li J, Zhang P, Hong J, Lee CO, Jung JH (2011) A cytotoxic fellutamide analogue from the sponge-derived fungus Aspergillus versicolor. Bulletin of the Korean Chemical Society 32: 3817-3820
25. Mbata TI (2008) Isolation of fungi in hyper saline Dead Sea water. Sudanese Journal of Public Health 3: 170-172
26. Mills JT, Abramson D (1986) Production of sterigmatocystin by isolates of Aspergillus versicolor from western Canadian stored barley and rapeseed/canola. Canadian Journal of Plant Pathology 82: 151-153
27. Moreno G, Arenas R. (2010) Other fungi causing onychomycosis. Clinics in Dermatology 28: 160-163
28. Nielsen KF (2003) Mycotoxin production by indoor molds. Fungal Genetics and Biology 39: 103-117
29. Perri P, Campa C, Incorvaia C, Parmeggiani F, Lamberti G, Costagliola C, Sebastian A (2005) Endogenous Aspergillus versicolor endophthalmitis in an immuno-competent HIV-positive patient. Mycopathologia 160: 259-261
30. Perrone G, Stea G, Epifani F, Varga J, Frisvad JC, Samson RA (2011) Aspergillus niger contains the cryptic phylogenetic species A. awamori. Fungal Biology 115: 1138-1150
31. Peterson SW (2008) Phylogenetic analysis of Aspergillus species using DNA sequences from four loci. Mycologia 100: 205-226
32. Peterson SW (2012) Aspergillus and Penicillium identification using DNA sequences: barcode or MLST? Applied Microbiology and Biotechnology DOI 10.1007/s00253-012-4165-2
33. Peterson SW, Ito Y, Horn BW, Goto T. (2001) Aspergillus bombycis, a new aflatoxigenic species and genetic variation in its sibling species, A. nomius. Mycologia 93: 689-703
34. Peterson SW, Jurjevic Z, Bills GF, Stchigel AM, Guarro J, Vega FE (2010) The genus Hamigera, six new species and multilocus DNA sequence based phylogeny. Mycologia 102: 847-864
35. Pfaller MA, Castanheira M, Diekema DJ, Messer SA, Jones RN (2011) Triazole and echinocandin MIC distributions with epidemiological cutoff values for differentiation of wild-type strains from non-wildtype strains of six uncommon species of Candida. Journal of Clinical Microbiology 49: 3800-3804
36. Pitt JI (1980) ["1979"] The Genus Penicillium and Its Teleomorph States Eupenicillium and Talaromyces. London: Academic Press
37. Pitt JI, Hocking AD (2009) Fungi and Food Spoilage. 3rd edn. London: Springer Verlag
38. Raper KB, Fennell DI (1965) The Genus Aspergillus. Baltimore, MD: Williams & Wilkins
39. Ridgway R (1912) Color Standards and Color Nomenclature. Washington, DC: Ridgway
40. Ronquist F, Huelsenbeck JP (2003) MrBayes3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574
41. Rydjord B, Hetlandy G, Wikerz HG (2005) Immunoglobulin G antibodies against environmental moulds in a Norwegian healthy population shows a bimodal distribution for Aspergillus versicolor. Scandinavian Journal of Immunology 62: 281-288
42. Samson RA, Houbraken J, Summerbell RC, Flannigan B, Miller JD (2001) Common and important species of fungi and actinomycetes in indoor environments. In: Microorganisms in Home and Indoor Work Environments (B. Flannigan, RA Samson & JD Miller, eds): 287-292. London: Taylor and Francis
43. Schoch CL, Seifert KA, Huhndorf S, Robert V, Souge JL, Levesque CA, Chen W, Fungal Barcoding Consortium (2012) Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proceedings of the National Academy of Sciences, USA 109: 6241-6246
44. Schwab CJ, Straus DC (2004) The roles of Penicillium and Aspergillus in sick building syndrome. Advances in Applied Microbiology 55: 215-238
45. Shelton BG, Kirkland KH, Dana W (2002) Profiles of airborne fungi in buildings and outdoor environments in the United States. Applied and Environmental Microbiology 68: 1743-1753
46. Soares C, Rodrigues P, Peterson SW, Lima N, Venâncio A (2012) Three new species of Aspergillus section Flavi isolated from almonds and maize in Portugal. Mycologia: doi:10.3852/11-088
47. Swofford DL (2003) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. Sunderland, MA: Sinauer Associates
48. Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC (2000) Phylogenetic species recognition and species concepts in fungi. Fungal Genetics and Biology 31: 21-32
49. Thom C, Church MB (1926) The Aspergilli. Baltimore, MD: Williams & Wilkins
50. Thom C, Raper KB (1945) Manual of the Aspergilli. Baltimore, MD: Williams & Wilkins
51. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTALW: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680
52. Tuomi T, Reijula K, Johnsson T, Hemminki K, Hintikka EL, Llindroos O, Kalso S, Koukila-Kähkölä P, Mussalo-Rauhamaa H, Haahtela T (2000) Mycotoxins in crude building materials from waterdamaged buildings. Applied and Environmental Microbiology 66: 1899-1904
53. Varga J, Frisvad JC, Samson RA. (2009) A reappraisal of fungi producing aflatoxins. World Mycotoxin Journal 2: 263-277
54. Veršilovskis A, Saeger SD (2010) Sterigmatocystin: occurrence in foodstuffs and analytical methods-an overview. Molecular Nutrition and Food Research 54: 136-147
55. Vesonder RF, Horn BW (1985) Sterigmatocystin in dairy cattle feed contaminated with Aspergillus versicolor. Applied and Environmental Microbiology 49: 234-235
56. Vesper SJ, Wong W, Kuo CM, Pierson DL (2008) Mold species in dust from the International Space Station identified and quantified by mold-specific quantitative PCR. Research in Microbiology 159: 32-435
57. Zhang S, Corapi W, Quist E, Griffin S, Zhang M (2012) Aspergillus versicolor, a new causative agent of canine disseminated aspergillosis. Journal of Clinical Microbiology 50: 187-191