-
1
-
-
2442502566
-
Mitochondrial cytochrome B DNA variation in the high-fecundity Atlantic cod: Trans-Atlantic clines and shallow gene genealogy
-
Árnason, E., 2004 Mitochondrial cytochrome B DNA variation in the high-fecundity Atlantic cod: trans-Atlantic clines and shallow gene genealogy. Genetics 166: 1871–1885.
-
(2004)
Genetics
, vol.166
, pp. 1871-1885
-
-
Árnason, E.1
-
2
-
-
37449025213
-
Beta-coalescents and continuous stable random trees
-
Berestycki, J., N. Berestycki, and J. Schweinsberg, 2007 Beta-coalescents and continuous stable random trees. Ann. Probab. 35: 1835–1887.
-
(2007)
Ann. Probab
, vol.35
, pp. 1835-1887
-
-
Berestycki, J.1
Berestycki, N.2
Schweinsberg, J.3
-
3
-
-
84903610182
-
Asymptotic sampling formulae for ?
-
coalescents, Probabilités et Statistiques, Institut Henri Poincaré
-
Berestycki, J., N. Berestycki, and V. Limic, 2014 Asymptotic sampling formulae for ?-coalescents, pp. 715–731 in Annales de l’Institut Henri Poincaré, Probabilités et Statistiques, Vol. 50. Institut Henri Poincaré. Available at: http://projecteuclid.org/euclid.aihp/1403276996.
-
(2014)
Annales De l’Institut Henri Poincaré
, vol.50
, pp. 715-731
-
-
Berestycki, J.1
Berestycki, N.2
Limic, V.3
-
4
-
-
77955274562
-
Recent progress in coalescent theory
-
Berestycki, N., 2009 Recent progress in coalescent theory. Ensaios Matematicos 16(1): 1–193.
-
(2009)
Ensaios Matematicos
, vol.16
, Issue.1
, pp. 1-193
-
-
Berestycki, N.1
-
5
-
-
84908206474
-
Descartes’ rule of signs and the identifiability of population demographic models from genomic variation data
-
Bhaskar, A., and Y. S. Song, 2014 Descartes’ rule of signs and the identifiability of population demographic models from genomic variation data. Ann. Stat. 42(6): 2469–2493.
-
(2014)
Ann. Stat
, vol.42
, Issue.6
, pp. 2469-2493
-
-
Bhaskar, A.1
Song, Y.S.2
-
6
-
-
84893828278
-
Distortion of genealogical properties when the sample is very large
-
Bhaskar, A., A. G. Clark, and Y. S. Song, 2014 Distortion of genealogical properties when the sample is very large. Proc. Natl. Acad. Sci. USA 111(6): 2385–2390.
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, Issue.6
, pp. 2385-2390
-
-
Bhaskar, A.1
Clark, A.G.2
Song, Y.S.3
-
7
-
-
84922377375
-
Efficient inference of population size histories and locus-specific mutation rates from large-sample genomic variation data
-
Bhaskar, A., Y. X. R. Wang, and Y. S. Song, 2015 Efficient inference of population size histories and locus-specific mutation rates from large-sample genomic variation data. Genome Res. 25(2): 268–279.
-
(2015)
Genome Res
, vol.25
, Issue.2
, pp. 268-279
-
-
Bhaskar, A.1
Wang, Y.X.R.2
Song, Y.S.3
-
8
-
-
77952803143
-
A modified lookdown construction for the Xi-Fleming-Viot process with mutation and populations with recurrent bottlenecks
-
Birkner, M., J. Blath, M. Möhle, M. Steinrücken, and J. Tams, 2009 A modified lookdown construction for the Xi-Fleming-Viot process with mutation and populations with recurrent bottlenecks. Alea 6: 25–61.
-
(2009)
Alea
, vol.6
, pp. 25-61
-
-
Birkner, M.1
Blath, J.2
Möhle, M.3
Steinrücken, M.4
Tams, J.5
-
9
-
-
84887030383
-
Statistical properties of the site-frequency spectrum associated with l-coalescents
-
Birkner, M., J. Blath, and B. Eldon, 2013a Statistical properties of the site-frequency spectrum associated with l-coalescents. Genetics 195: 1037–1053.
-
(2013)
Genetics
, vol.195
, pp. 1037-1053
-
-
Birkner, M.1
Blath, J.2
Eldon, B.3
-
10
-
-
84871723554
-
An ancestral recombination graph for diploid populations with skewed offspring distribution
-
Birkner, M., J. Blath, and B. Eldon, 2013b An ancestral recombination graph for diploid populations with skewed offspring distribution. Genetics 193: 255–290.
-
(2013)
Genetics
, vol.193
, pp. 255-290
-
-
Birkner, M.1
Blath, J.2
Eldon, B.3
-
12
-
-
0010117449
-
On Ruelle’s probability cascades and an abstract cavity method
-
Commun. Math
-
Bolthausen, E., and A. S. Sznitman, 1998 On Ruelle’s probability cascades and an abstract cavity method. Commun. Math. Phys. 197: 247–276.
-
(1998)
Phys
, vol.197
, pp. 247-276
-
-
Bolthausen, E.1
Sznitman, A.S.2
-
13
-
-
78650037203
-
Deep resequencing reveals excess rare recent variants consistent with explosive population growth
-
Coventry, A., L. M. Bull-Otterson, X. Liu, A. G. Clark, T. J. Maxwell et al., 2010 Deep resequencing reveals excess rare recent variants consistent with explosive population growth. Nat. Commun. 1: 131.
-
(2010)
Nat. Commun
, vol.1
, pp. 131
-
-
Coventry, A.1
Bull-Otterson, L.M.2
Liu, X.3
Clark, A.G.4
Maxwell, T.J.5
-
14
-
-
0033243134
-
Particle representations for measure-valued population models
-
Donnelly, P., and T. G. Kurtz, 1999 Particle representations for measure-valued population models. Ann. Probab. 27(1): 166– 205.
-
(1999)
Ann. Probab.
, vol.27
, Issue.1
-
-
Donnelly, P.1
Kurtz, T.G.2
-
15
-
-
4143062780
-
Approximating selective sweeps
-
Durrett, R., and J. Schweinsberg, 2004 Approximating selective sweeps. Theor. Popul. Biol. 66(2): 129–138.
-
(2004)
Theor. Popul. Biol
, vol.66
, Issue.2
, pp. 129-138
-
-
Durrett, R.1
Schweinsberg, J.2
-
16
-
-
24144471796
-
A coalescent model for the effect of advantageous mutations on the genealogy of a population
-
Durrett, R., and J. Schweinsberg, 2005 A coalescent model for the effect of advantageous mutations on the genealogy of a population. Stoch. Proc. Appl. 115: 1628–1657.
-
(2005)
Stoch. Proc. Appl
, vol.115
, pp. 1628-1657
-
-
Durrett, R.1
Schweinsberg, J.2
-
17
-
-
33646168295
-
2006 Coalescent processes when the distribution of offspring number among individuals is highly skewed
-
1559
-
Eldon, B., and J. Wakeley, 2006 Coalescent processes when the distribution of offspring number among individuals is highly skewed. Genetics 172: 2621–2633.1559
-
Genetics
, vol.172
, pp. 2621-2633
-
-
Eldon, B.1
Wakeley, J.2
-
18
-
-
84925002635
-
Can the site-frequency spectrum distinguish exponential population growth from multiple-merger coalescents?
-
Eldon, B., M. Birkner, J. Blath, and F. Freund, 2015 Can the site-frequency spectrum distinguish exponential population growth from multiple-merger coalescents? Genetics 199: 841–856.
-
(2015)
Genetics
, vol.199
, pp. 841-856
-
-
Eldon, B.1
Birkner, M.2
Blath, J.3
Freund, F.4
-
19
-
-
84887312794
-
Robust demographic inference from genomic and SNP data
-
Excoffier, L., I. Dupanloup, E. Huerta-Sánchez, V. C. Sousa, and M. Foll, 2013 Robust demographic inference from genomic and SNP data. PLoS Genet. 9(10): e1003905.
-
(2013)
Plos Genet
, vol.9
, Issue.10
-
-
Excoffier, L.1
Dupanloup, I.2
Huerta-Sánchez, E.3
Sousa, V.C.4
Foll, M.5
-
20
-
-
0029391126
-
Statistical properties of segregating sites
-
Fu, Y.-X., 1995 Statistical properties of segregating sites. Theor. Popul. Biol. 48(2): 172–197.
-
(1995)
Theor. Popul. Biol
, vol.48
, Issue.2
, pp. 172-197
-
-
Fu, Y.-X.1
-
21
-
-
33646487014
-
Exact coalescent for the Wright-Fisher model
-
Fu, Y.-X., 2006 Exact coalescent for the Wright-Fisher model. Theor. Popul. Biol. 69(4): 385–394.
-
(2006)
Theor. Popul. Biol
, vol.69
, Issue.4
, pp. 385-394
-
-
Fu, Y.-X.1
-
22
-
-
84953911262
-
Inference of super-exponential human population growth via efficient computation of the site frequency spectrum for generalized models
-
Gao, F., and A. Keinan, 2016 Inference of super-exponential human population growth via efficient computation of the site frequency spectrum for generalized models. Genetics 202: 235–245.
-
(2016)
Genetics
, vol.202
, pp. 235-245
-
-
Gao, F.1
Keinan, A.2
-
23
-
-
79961091828
-
Genomes Project, 2011 Demographic history and rare allele sharing among human populations
-
1000
-
Gravel, S., B. M. Henn, R. N. Gutenkunst, A. R. Indap, G. T. Marth et al.; 1000 Genomes Project, 2011 Demographic history and rare allele sharing among human populations. Proc. Natl. Acad. Sci. USA 108(29): 11983–11988.
-
Proc. Natl. Acad. Sci. USA
, vol.108
, Issue.29
, pp. 11983-11988
-
-
Gravel, S.1
Henn, B.M.2
Gutenkunst, R.N.3
Indap, A.R.4
Marth, G.T.5
-
24
-
-
0001301442
-
The age of a mutation in a general coalescent tree
-
Griffiths, R., and S. Tavaré, 1998 The age of a mutation in a general coalescent tree. Commun. Stat. Stoch. Models 14(1–2): 273–295.
-
(1998)
Commun. Stat. Stoch. Models
, vol.14
, Issue.12
, pp. 273-295
-
-
Griffiths, R.1
Tavaré, S.2
-
25
-
-
73449149044
-
Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
-
Gutenkunst, R. N., R. D. Hernandez, S. H. Williamson, and C. D. Bustamante, 2009 Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS Genet. 5(10): e1000695.
-
(2009)
Plos Genet
, vol.5
, Issue.10
-
-
Gutenkunst, R.N.1
Hernandez, R.D.2
Williamson, S.H.3
Bustamante, C.D.4
-
26
-
-
80054114829
-
Sweepstakes reproductive success in highly fecund marine fish and shellfish: A review and commentary
-
Hedgecock, D., and A. I. Pudovkin, 2011 Sweepstakes reproductive success in highly fecund marine fish and shellfish: a review and commentary. Bull. Mar. Sci. 87(4): 971–1002.
-
(2011)
Bull. Mar. Sci
, vol.87
, Issue.4
, pp. 971-1002
-
-
Hedgecock, D.1
Pudovkin, A.I.2
-
27
-
-
84892851212
-
Pareto genealogies arising from a Poisson branching evolution model with selection
-
Huillet, T. E., 2014 Pareto genealogies arising from a Poisson branching evolution model with selection. J. Math. Biol. 68 (3): 727–761.
-
(2014)
J. Math. Biol
, vol.68
, Issue.3
, pp. 727-761
-
-
Huillet, T.E.1
-
31
-
-
84905044198
-
A spectral decomposition for the block counting process of the Bolthausen-Sznitman coalescent
-
Möhle, M., and H. Pitters, 2014 A spectral decomposition for the block counting process of the Bolthausen-Sznitman coalescent. Electron. Commun. Probab. 19(47): 1–11.
-
(2014)
Electron. Commun. Probab
, vol.19
, Issue.47
, pp. 1-11
-
-
Möhle, M.1
Pitters, H.2
-
32
-
-
0035470867
-
A classification of coalescent processes for haploid exchangeable population models
-
Möhle, M., and S. Sagitov, 2001 A classification of coalescent processes for haploid exchangeable population models. Ann. Probab. 29(4): 1547–1562.
-
(2001)
Ann. Probab
, vol.29
, Issue.4
, pp. 1547-1562
-
-
Möhle, M.1
Sagitov, S.2
-
33
-
-
10744222533
-
Coalescent patterns in diploid exchangeable population models
-
Möhle, M., and S. Sagitov, 2003 Coalescent patterns in diploid exchangeable population models. J. Math. Biol. 47(4): 337–352.
-
(2003)
J. Math. Biol
, vol.47
, Issue.4
, pp. 337-352
-
-
Möhle, M.1
Sagitov, S.2
-
34
-
-
41149157336
-
Can one learn history from the allelic spectrum?
-
Myers, S., C. Fefferman, and N. Patterson,2008 Can one learn history from the allelic spectrum? Theor. Popul. Biol. 73(3): 342–348.
-
(2008)
Theor. Popul. Biol
, vol.73
, Issue.3
, pp. 342-348
-
-
Myers, S.1
Fefferman, C.2
Patterson, N.3
-
35
-
-
84872201548
-
Genealogies of rapidly adapting populations
-
Neher, R. A., and O. Hallatschek, 2013 Genealogies of rapidly adapting populations. Proc. Natl. Acad. Sci. USA 110(2): 437–442.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, Issue.2
, pp. 437-442
-
-
Neher, R.A.1
Hallatschek, O.2
-
36
-
-
0033965571
-
Estimation of population parameters and recombination rates from single nucleotide polymorphisms
-
Nielsen, R., 2000 Estimation of population parameters and recombination rates from single nucleotide polymorphisms. Genetics 154: 931–942.
-
(2000)
Genetics
, vol.154
, pp. 931-942
-
-
Nielsen, R.1
-
37
-
-
0033233681
-
Coalescents with multiple collisions
-
Pitman, J., 1999 Coalescents with multiple collisions. Ann. Probab. 27: 1870–1902.
-
(1999)
Ann. Probab
, vol.27
, pp. 1870-1902
-
-
Pitman, J.1
-
38
-
-
0141566652
-
New explicit expressions for relative frequencies of single-nucleotide polymorphisms with application to statistical inference on population growth
-
Polanski, A., and M. Kimmel, 2003 New explicit expressions for relative frequencies of single-nucleotide polymorphisms with application to statistical inference on population growth. Genetics 165: 427–436.
-
(2003)
Genetics
, vol.165
, pp. 427-436
-
-
Polanski, A.1
Kimmel, M.2
-
39
-
-
0037289895
-
A note on distributions of times to coalescence, under time-dependent population size
-
Polanski, A., A. Bobrowski, and M. Kimmel, 2003 A note on distributions of times to coalescence, under time-dependent population size. Theor. Popul. Biol. 63(1): 33–40.
-
(2003)
Theor. Popul. Biol
, vol.63
, Issue.1
, pp. 33-40
-
-
Polanski, A.1
Bobrowski, A.2
Kimmel, M.3
-
40
-
-
0033233843
-
The general coalescent with asynchronous mergers of ancestral lines
-
Sagitov, S., 1999 The general coalescent with asynchronous mergers of ancestral lines. J. Appl. Probab. 36(4): 1116–1125.
-
(1999)
J. Appl. Probab
, vol.36
, Issue.4
, pp. 1116-1125
-
-
Sagitov, S.1
-
41
-
-
0001885968
-
Coalescents with simultaneous multiple collisions. Electron
-
Schweinsberg, J., 2000 Coalescents with simultaneous multiple collisions. Electron. J. Probab. 5: 1–50.
-
(2000)
J. Probab
, vol.5
, pp. 1-50
-
-
Schweinsberg, J.1
-
43
-
-
84934917155
-
Fundamental limits on the accuracy of demographic inference based on the sample frequency spectrum
-
Terhorst, J., and Y. S. Song, 2015 Fundamental limits on the accuracy of demographic inference based on the sample frequency spectrum. Proc. Natl. Acad. Sci. USA 112(25): 7677–7682.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, Issue.25
, pp. 7677-7682
-
-
Terhorst, J.1
Song, Y.S.2
|