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Volumn 32, Issue 2, 2016, Pages 102-111

Diversity evaluation of Xylella fastidiosa from infected olive trees in Apulia (Southern Italy)

Author keywords

16S rDNA gene; Genetic variation; Gyrase B; Hypothetical protein; Olea europea

Indexed keywords


EID: 84964048303     PISSN: 15982254     EISSN: 20939280     Source Type: Journal    
DOI: 10.5423/PPJ.OA.08.2015.0153     Document Type: Article
Times cited : (18)

References (42)
  • 3
    • 84964051863 scopus 로고    scopus 로고
    • Xylella fastidiosa la più grave minaccia dell’olivicoltura Italiana
    • Catalano, L. 2015. Xylella fastidiosa la più grave minaccia dell’olivicoltura Italiana. L’Informatore Agrario 16: 36-42.
    • (2015) L’Informatore Agrario , vol.16 , pp. 36-42
    • Catalano, L.1
  • 4
    • 0033990708 scopus 로고    scopus 로고
    • Use of the 16S rDNA sequence as signature characters to identify Xylella fastidiosa
    • Chen, J. C., Banks, D., Jarret, R. L., Chang, C. J. and Smith, B. J. 2000a. Use of the 16S rDNA sequence as signature characters to identify Xylella fastidiosa. Curr. Microbiol. 40: 29-33.
    • (2000) Curr. Microbiol. , vol.40 , pp. 29-33
    • Chen, J.C.1    Banks, D.2    Jarret, R.L.3    Chang, C.J.4    Smith, B.J.5
  • 6
    • 20044385470 scopus 로고    scopus 로고
    • Two Xylella fastidiosa genotypes associated with almond leaf scorch disease on the same location in California
    • Chen, J., Groves, R., Civerolo, E. J., Viveros, M., Freeman, M. and Zheng, Y. 2005. Two Xylella fastidiosa genotypes associated with almond leaf scorch disease on the same location in California. Phytopathology 95: 708-714.
    • (2005) Phytopathology , vol.95 , pp. 708-714
    • Chen, J.1    Groves, R.2    Civerolo, E.J.3    Viveros, M.4    Freeman, M.5    Zheng, Y.6
  • 7
    • 84964073575 scopus 로고    scopus 로고
    • Chapter 1. Worldwide diffusion and relevance of olive culture
    • eds. by L. Schena, G.E. Agosteo and S.O. Cacciola, Transworld Research Network T.C. 37/661(2), Fort P.O. Trivandrum-695 023, Kerala, India
    • Cimato, A. and Attilio, C. 2011. Chapter 1. Worldwide diffusion and relevance of olive culture. In: Olive Diseases and Disorders, eds. by L. Schena, G.E. Agosteo and S.O. Cacciola, pp. 1-23. Transworld Research Network T.C. 37/661(2), Fort P.O. Trivandrum-695 023, Kerala, India.
    • (2011) Olive Diseases and Disorders , pp. 1-23
    • Cimato, A.1    Attilio, C.2
  • 8
    • 84964053554 scopus 로고    scopus 로고
    • Response to scientific and technical information provided by an NGO on Xylella fastidiosa
    • EFSA (European Food Safety Authority), 2015. Response to scientific and technical information provided by an NGO on Xylella fastidiosa. EFSA J. 13: 4082.
    • (2015) EFSA J. , vol.13 , pp. 4082
  • 9
    • 84921486581 scopus 로고    scopus 로고
    • Multilocus sequence typing of Xylella fastidiosa isolated from olive affected by "olive quick decline syndrome" in Italy
    • Elbeaino, T., Valentini, F., Abou Kubaa, R., Moubarak, P., Yaseen, T. and Digiaro, M. 2014. Multilocus sequence typing of Xylella fastidiosa isolated from olive affected by "olive quick decline syndrome" in Italy. Phytopathol. Medit. 53: 533-542.
    • (2014) Phytopathol. Medit. , vol.53 , pp. 533-542
    • Elbeaino, T.1    Valentini, F.2    Abou Kubaa, R.3    Moubarak, P.4    Yaseen, T.5    Digiaro, M.6
  • 10
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 11
    • 0007165819 scopus 로고
    • Specific identification of Xylella fastidiosa using the polymerase chain reaction
    • Firrrao, G. and Bazzi, C. 1994. Specific identification of Xylella fastidiosa using the polymerase chain reaction. Phytopathol. Medit. 33: 90-92.
    • (1994) Phytopathol. Medit. , vol.33 , pp. 90-92
    • Firrrao, G.1    Bazzi, C.2
  • 12
    • 84964051872 scopus 로고    scopus 로고
    • Integrated soil and water management for orchard development, role and importance
    • Fontanazza, G., Benites, J. (ed.), Pisante, M. and Stagnari, F. 2005. Integrated soil and water management for orchard development, role and importance. FAO Land Water Bull. 1024-6703, no.10: 13-20.
    • (2005) FAO Land Water Bull. , vol.1024-6703 , Issue.10 , pp. 13-20
    • Fontanazza, G.1    Benites, J.2    Pisante, M.3    Stagnari, F.4
  • 13
    • 33745697927 scopus 로고    scopus 로고
    • Genome-based PCR primers for specific and sensitive detection and quantification of Xylella fastidiosa
    • Francis, M., Lin, H., Cabrera-La Rosa, J., Doddapaneni, H. and Civerelo, E. L. 2006. Genome-based PCR primers for specific and sensitive detection and quantification of Xylella fastidiosa. Eur. J. Plant Pathol. 115: 203-213.
    • (2006) Eur. J. Plant Pathol. , vol.115 , pp. 203-213
    • Francis, M.1    Lin, H.2    Cabrera-La Rosa, J.3    Doddapaneni, H.4    Civerelo, E.L.5
  • 15
    • 34447130309 scopus 로고    scopus 로고
    • Phylogenetic relationships of Xylella fastidiosa strains isolated from landscape ornamentals in southern California
    • Hernandez-Martinez, R., de la Cerda., K. A, Costa, H. S., Cooksey, D. A. and Wong, F. P. 2007. Phylogenetic relationships of Xylella fastidiosa strains isolated from landscape ornamentals in southern California. Phytopathology 97: 857-864.
    • (2007) Phytopathology , vol.97 , pp. 857-864
    • Hernandez-Martinez, R.1    De La Cerda, K.A.2    Costa, H.S.3    Cooksey, D.A.4    Wong, F.P.5
  • 16
    • 0024871855 scopus 로고
    • "Xylella fastidiosa: Xylem-limited bacterial pathogen of plants"
    • Hopkins, D. L. 1989. "Xylella fastidiosa: xylem-limited bacterial pathogen of plants". Ann. Rev. Phytopathol. 27: 271-290.
    • (1989) Ann. Rev. Phytopathol. , vol.27 , pp. 271-290
    • Hopkins, D.L.1
  • 17
    • 0036792413 scopus 로고    scopus 로고
    • Xylella fastidiosa: Cause of Pierce’s Disease of grapevine and other emergent diseases
    • Hopkins, D. L. and Purcell, A. H. 2002. Xylella fastidiosa: Cause of Pierce’s Disease of grapevine and other emergent diseases. Plant Dis. 86: 1056-1066.
    • (2002) Plant Dis. , vol.86 , pp. 1056-1066
    • Hopkins, D.L.1    Purcell, A.H.2
  • 18
    • 84964051878 scopus 로고    scopus 로고
    • July-September 2009), Market Commentary
    • IOC, 2009. Olive Products market report summary (№ 33, July-September 2009), Market Commentary.
    • (2009) Olive Products market report summary , Issue.33
  • 19
    • 78649770308 scopus 로고    scopus 로고
    • Xylella fastidiosa: Its biology, diagnosis, control and risks
    • Janse, J. D. and Obradovic, A. 2010. Xylella fastidiosa: its biology, diagnosis, control and risks. J. Plant Pathol. 92(1 Supplement): 35-48.
    • (2010) J. Plant Pathol. , vol.92 , Issue.1 , pp. 35-48
    • Janse, J.D.1    Obradovic, A.2
  • 20
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 22
    • 34248178941 scopus 로고    scopus 로고
    • 16S-23S rDNA: Polymorphisms and their use for detection and amplification of Xylella fastidiosa strains
    • Martinati, J. C., Hansen Pacheco, F. T. Oliveira de Miranda, V. F. and Tsai, S. M. 2007. 16S-23S rDNA: Polymorphisms and their use for detection and amplification of Xylella fastidiosa strains. B. J. Microbiol. 38: 159-165.
    • (2007) B. J. Microbiol. , vol.38 , pp. 159-165
    • Martinati, J.C.1    Pacheco, H.2    Oliveira De Miranda, F.T.V.F.3    Tsai, S.M.4
  • 23
    • 0035072623 scopus 로고    scopus 로고
    • Phylogenetic relationships of Xylella fastidiosa strains from different hosts based on 16S rDNA and 16S-23S intergenic spacer sequences
    • Mehta, A. and Rosato, Y. B. 2001. Phylogenetic relationships of Xylella fastidiosa strains from different hosts based on 16S rDNA and 16S-23S intergenic spacer sequences. Int. J. Sys. Evol. Microbiol. 51: 311-318.
    • (2001) Int. J. Sys. Evol. Microbiol. , vol.51 , pp. 311-318
    • Mehta, A.1    Rosato, Y.B.2
  • 24
    • 0035859896 scopus 로고    scopus 로고
    • DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes
    • Murray, A. E., Lies, D., Li, G., Nealson, K., Zhou, J. and Tiedje, J. M. 2001. DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes. Proc. Nat. Acad. Sci. USA 98: 9853-9858.
    • (2001) Proc. Nat. Acad. Sci. USA , vol.98 , pp. 9853-9858
    • Murray, A.E.1    Lies, D.2    Li, G.3    Nealson, K.4    Zhou, J.5    Tiedje, J.M.6
  • 25
    • 84911388053 scopus 로고    scopus 로고
    • The Complex Biogeography of the Plant Pathogen Xylella fastidiosa: Genetic Evidence of Introductions and Subspecific Introgression in Central America
    • Nunney, L., Ortiz, B., Russell, S. A., Ruiz Saʼnchez, R. and Stouthamer, R. 2014. The Complex Biogeography of the Plant Pathogen Xylella fastidiosa: Genetic Evidence of Introductions and Subspecific Introgression in Central America. PLoS ONE 9: e112463.
    • (2014) PLoS ONE , vol.9
    • Nunney, L.1    Ortiz, B.2    Russell, S.A.3    Ruiz Saʼnchez, R.4    Stouthamer, R.5
  • 26
    • 0029908527 scopus 로고    scopus 로고
    • Fastidious xylem-limited bacterial plant pathogens
    • Purcell, A. H. and Hopkins, D. L. 1996. Fastidious xylem-limited bacterial plant pathogens. Ann. Rev. Phytopathol. 3: 131-151.
    • (1996) Ann. Rev. Phytopathol. , vol.3 , pp. 131-151
    • Purcell, A.H.1    Hopkins, D.L.2
  • 27
    • 84881401038 scopus 로고    scopus 로고
    • Paradigms: Examples from the bacterium Xylella fastidiosa
    • Purcell, A. H. 2013. Paradigms: Examples from the bacterium Xylella fastidiosa. Ann. Rev. Plant Pathol. 51: 229-356.
    • (2013) Ann. Rev. Plant Pathol. , vol.51 , pp. 229-356
    • Purcell, A.H.1
  • 29
    • 0038154070 scopus 로고    scopus 로고
    • Detection and Diversity Assessment of Xylella fastidiosa in Field-Collected Plant and Insect Samples by Using 16S rRNA and gyrB Sequences
    • Rodrigues, J. L. M., Silva-Stenico, M. E., Gomes, J. E., Lopes, J. R. S. and Tsai, S. M. 2003. Detection and Diversity Assessment of Xylella fastidiosa in Field-Collected Plant and Insect Samples by Using 16S rRNA and gyrB Sequences. Appl. Environ. Microbiol. 69: 4249-4255.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 4249-4255
    • Rodrigues, J.L.M.1    Silva-Stenico, M.E.2    Gomes, J.E.3    Lopes, J.R.S.4    Tsai, S.M.5
  • 30
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. and Nei, M. 1987. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molec. Biol. Evol. 4: 406-425.
    • (1987) Molec. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 84888803051 scopus 로고    scopus 로고
    • Identification of DNA sequences related to Xylella fastidiosa in oleander, almond and olive trees exhibiting leaf scorch symptoms in Apulia (Southern Italy). Disease Note
    • Saponari, M., Boscia, D., Nigro, F. and Martelli, G. P. 2013. Identification of DNA sequences related to Xylella fastidiosa in oleander, almond and olive trees exhibiting leaf scorch symptoms in Apulia (Southern Italy). Disease Note. J. Plant Pathol. 94(3): 688.
    • (2013) J. Plant Pathol. , vol.94 , Issue.3 , pp. 688
    • Saponari, M.1    Boscia, D.2    Nigro, F.3    Martelli, G.P.4
  • 32
    • 0036084834 scopus 로고    scopus 로고
    • Real-time polymerase chain reaction for one-hour on-site diagnosis of grape early season asymptomatic vines
    • Schaad, N. W., Opgenorth, D. and Gaush, P. 2002. Real-time polymerase chain reaction for one-hour on-site diagnosis of grape early season asymptomatic vines. Phytopathology 92: 721-728.
    • (2002) Phytopathology , vol.92 , pp. 721-728
    • Schaad, N.W.1    Opgenorth, D.2    Gaush, P.3
  • 33
    • 2642569160 scopus 로고    scopus 로고
    • Xylella fastidiosa subspecies: X. fastidiosa subsp. fastidiosa subsp. nov., X. fastidiosa subsp. multiplex subsp. nov., and X. fastidiosa subsp. pauca subsp. nov
    • Schaad, N. W., Postnikova, E., Lacy, G., Fatmi, M. and Chang, C. J. 2004. Xylella fastidiosa subspecies: X. fastidiosa subsp. fastidiosa subsp. nov., X. fastidiosa subsp. multiplex subsp. nov., and X. fastidiosa subsp. pauca subsp. nov. Syst. Appl. Microbiol. 27: 290-300.
    • (2004) Syst. Appl. Microbiol. , vol.27 , pp. 290-300
    • Schaad, N.W.1    Postnikova, E.2    Lacy, G.3    Fatmi, M.4    Chang, C.J.5
  • 34
    • 22144448608 scopus 로고    scopus 로고
    • A multigene phylogenetic study of clonal diversity and divergence in North American strains of the plant pathogen Xylella fastidiosa
    • Schuenzel, E. L., Scally, M., Stouthamer, R. and Nunney, L. 2005. A multigene phylogenetic study of clonal diversity and divergence in North American strains of the plant pathogen Xylella fastidiosa. Appl. Environ. Microbiol. 71: 3832-3839.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 3832-3839
    • Schuenzel, E.L.1    Scally, M.2    Stouthamer, R.3    Nunney, L.4
  • 35
    • 0034644159 scopus 로고    scopus 로고
    • The genome sequence of the plant pathogen Xylella fastidiosa
    • Simpson, A. J. G., Reinach, F. C. and Arruda, P. et al. 2000. The genome sequence of the plant pathogen Xylella fastidiosa. Nature 406: 151-157.
    • (2000) Nature , vol.406 , pp. 151-157
    • Simpson, A.J.G.1    Reinach, F.C.2    Arruda, P.3
  • 36
    • 3342920601 scopus 로고    scopus 로고
    • Prospects for inferring very large phylogenies by using the neighbour-joining method
    • Tamura, K., Nei, M. and Kumar, S. 2004. Prospects for inferring very large phylogenies by using the neighbour-joining method. Proc. Nat. Acad. Sci. USA 101: 11030-11035.
    • (2004) Proc. Nat. Acad. Sci. USA , vol.101 , pp. 11030-11035
    • Tamura, K.1    Nei, M.2    Kumar, S.3
  • 38
    • 0028948030 scopus 로고
    • PCR amplification and Direct Sequencing of gyrB genes with Universal Primers and Their Application to the Detection and Taxonomic Analysis of Pseudomoans putida Strains
    • Yamamoto, S. and Harayama, S., 1995. PCR amplification and Direct Sequencing of gyrB genes with Universal Primers and Their Application to the Detection and Taxonomic Analysis of Pseudomoans putida Strains. Appl. Environ. Microbiol. 61: 1104-1109.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1104-1109
    • Yamamoto, S.1    Harayama, S.2
  • 39
    • 0029863154 scopus 로고    scopus 로고
    • Phylogenetic analysis of Acinetobacter strains based on nucleotide sequences of gyrB genes and on the amino acid sequences of their products
    • Yamamoto, S. and Harayama, S. 1996. Phylogenetic analysis of Acinetobacter strains based on nucleotide sequences of gyrB genes and on the amino acid sequences of their products. Int. J. Syst. Bact. 46: 506-511.
    • (1996) Int. J. Syst. Bact. , vol.46 , pp. 506-511
    • Yamamoto, S.1    Harayama, S.2
  • 40
    • 0032931780 scopus 로고    scopus 로고
    • Phylogenetic structures of the genus Acinetobacter based on gyrB sequences: Comparison with the grouping by DNA-DNA hybridization
    • Yamamoto, S., Bouvet, P. J. and Harayama, S. 1999. Phylogenetic structures of the genus Acinetobacter based on gyrB sequences: comparison with the grouping by DNA-DNA hybridization. Int. J. Syst. Bact. 49: 87-95.
    • (1999) Int. J. Syst. Bact. , vol.49 , pp. 87-95
    • Yamamoto, S.1    Bouvet, P.J.2    Harayama, S.3
  • 41
    • 0001350089 scopus 로고
    • Xylella fastidiosa gen. nov., sp. nov.: Gram-negative, xylem-limited, fastidious plant bacteria related to Xanthomonas spp
    • Wells, J. M., Raju, B. C., Hung, H. Y., Weisburg, W. G., Mandelco-Paul, L. and Brenner, D. J. 1987. Xylella fastidiosa gen. nov., sp. nov.: Gram-negative, xylem-limited, fastidious plant bacteria related to Xanthomonas spp. Int. J. Syst. Biol. 37: 136-143.
    • (1987) Int. J. Syst. Biol. , vol.37 , pp. 136-143
    • Wells, J.M.1    Raju, B.C.2    Hung, H.Y.3    Weisburg, W.G.4    Mandelco-Paul, L.5    Brenner, D.J.6


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