Micropollutant degradation via extracted native enzymes from activated sludge

Water Research

Volumn 95, Issue , 2016, Pages 348-360

  Krah, Daniel ^a   Ghattas, Ann Kathrin ^a   Wick, Arne ^a   Bröder, Kathrin ^a   Ternes, Thomas A ^a  

^a FEDERAL INSTITUTE OF HYDROLOGY   (Germany)

Author keywords

Activated sludge; Enzyme assay; Micropollutant biodegradation; Native enzymes; Protein extraction

Indexed keywords

AMIDES; ANTIBIOTICS; ASSAYS; BIODEGRADABILITY; HYDROLASES; PHOSPHATASES; SULFUR COMPOUNDS; WASTEWATER TREATMENT;

ACTIVATED SLUDGE; CELL-FREE; ENZYMATIC ACTIVITIES; ENZYME ASSAYS; LYSATES; MICROPOLLUTANT BIODEGRADATION; MICROPOLLUTANTS; NATIVE ENZYMES; OH -; PROTEIN EXTRACTION;

BIODEGRADATION;

ACETIC ACID DERIVATIVE; ACID PHOSPHATASE; AMIDE; AMMONIUM SULFATE; ATENOLOL; BETA GALACTOSIDASE; BETA GLUCURONIDASE; BEZAFIBRATE; ERYTHROMYCIN; HYDROLASE; LICARBAZEPINE; PARACETAMOL;

ACTIVATED SLUDGE; BIOASSAY; BIODEGRADATION; ENZYME; ENZYME ACTIVITY; EXTRACTION METHOD; INORGANIC COMPOUND; ORGANIC POLLUTANT; PROTEIN; WATER TREATMENT;

ACTIVATED SLUDGE; ARTICLE; BIODEGRADABILITY; BIODEGRADATION; BIOTRANSFORMATION; CELL LYSATE; ENZYME ACTIVITY; ENZYME ASSAY; HYDROLYSIS; OXIDATION; POLLUTANT; PRIORITY JOURNAL; SLUDGE; WASTE WATER MANAGEMENT; SEWAGE; TANDEM MASS SPECTROMETRY; WASTE WATER; WATER POLLUTANT;

BETA-GALACTOSIDASE; SEWAGE; TANDEM MASS SPECTROMETRY; WASTE WATER; WATER POLLUTANTS, CHEMICAL;

EID: 84962515927     PISSN: 00431354     EISSN: 18792448     Source Type: Journal    
DOI: 10.1016/j.watres.2016.03.037     Document Type: Article

References (62)

1. Abu Laban N., Selesi D., Jobelius C., Meckenstock R.U. Anaerobic benzene degradation by Gram-positive sulfate-reducing bacteria. FEMS Microbiol. Ecol. 2009, 68(3):300-311.
2. Agerkvist I., Enfors S.-O. Characterization of E. coli cell disintegrates from a bead mill and high pressure homogenizers. Biotechnol. Bioeng. 1990, 36(11):1083-1089.
3. Arnosti C., Bell C., Moorhead D.L., Sinsabaugh R.L., Steen A.D. Extracellular enzymes in terrestrial, freshwater, and marine environments: perspectives on system variability and common research needs. Biogeochemistry 2014, 117(1):5-21.
4. Barbieri M., Licha T., Nödler K., Carrera J., Ayora C., Sanchez-Vila X. Fate of β-blockers in aquifer material under nitrate reducing conditions: batch experiments. Chemosphere 2012, 89(11):1272-1277.
5. Barrett A.J., Rawlings N.D., Salvesen G., Woessner J.F. Handbook of Proteolytic Enzymes Introduction 2013, Elsevier Science Bv, Amsterdam.
6. Beel R., Eversloh C.L., Ternes T.A. Biotransformation of the UV-filter sulisobenzone: challenges for the identification of transformation products. Environ. Sci. Technol. 2013, 47(13):6819-6828.
7. Bitton G. Wastewater Microbiology 2005, 153-171. John Wiley & Sons, Inc.
8. Boeckmann B., Blatter M.-C., Famiglietti L., Hinz U., Lane L., Roechert B., Bairoch A. Protein variety and functional diversity: Swiss-Prot annotation in its biological context. C. R. Biol. 2005, 328(10-11):882-899.
9. Broderick J.B. eLS 2001, John Wiley & Sons, Ltd.
10. Burgess J., Pletschke B. Hydrolytic enzymes in sewage sludge treatment: a mini-review. Water SA 2008, 34(3):343-349.
11. Burgess J.E., Pletschke B.I. Hydrolytic enzymes in sewage sludge treatment: a mini-review. Water SA 2008, 34:343-350.
12. Collado N., Buttiglieri G., Kolvenbach B.A., Comas J., Corvini P.F.X., Rodríguez-Roda I. Exploring the potential of applying proteomics for tracking bisphenol A and nonylphenol degradation in activated sludge. Chemosphere 2013, 90(8):2309-2314.
13. Cortés-Lorenzo C., Rodríguez-Díaz M., López-Lopez C., Sánchez-Peinado M., Rodelas B., González-López J. Effect of salinity on enzymatic activities in a submerged fixed bed biofilm reactor for municipal sewage treatment. Bioresour. Technol. 2012, 121(0):312-319.
14. Daughton C.G., Ternes T.A. Pharmaceuticals and personal care products in the environment: agents of subtle change?. Environ. Health Perspect. 1999, 107(6):907-938.
15. Ettwig K.F., van Alen T., van de Pas-Schoonen K.T., Jetten M.S.M., Strous M. Enrichment and molecular detection of denitrifying methanotrophic bacteria of the NC10 phylum. Appl. Environ. Microbiol. 2009, 75(11):3656-3662.
16. Falås P., Wick A., Castronovo S., Habermacher J., Ternes T.A., Joss A. Tracing the limits of organic micropollutant removal in biological wastewater treatment. Water Res. 2015, (in press).
17. Fischer K., Majewsky M. Cometabolic degradation of organic wastewater micropollutants by activated sludge and sludge-inherent microorganisms. Appl. Microbiol. Biotechnol. 2014, 98(15):6583-6597.
18. Flemming H.-C., Wingender J. The biofilm matrix. Nat. Rev. Microbiol. 2010, 8(9):623-633.
19. Garcia-Rodriguez A., Matamoros V., Fontas C., Salvado V. The ability of biologically based wastewater treatment systems to remove emerging organic contaminants-a review. Environ. Sci. Pollut. Res. 2014, 21(20):11708-11728.
20. Gessesse A., Dueholm T., Petersen S.B., Nielsen P.H. Lipase and protease extraction from activated sludge. Water Res. 2003, 37(15):3652-3657.
21. Gómez-Silván C., Arévalo J., Pérez J., González-López J., Rodelas B. Linking hydrolytic activities to variables influencing a submerged membrane bioreactor (MBR) treating urban wastewater under real operating conditions. Water Res. 2013, 47(1):66-78.
22. Grekova-Vasileva M., Topalova Y. Enzyme activities and shifts in microbial populations associated with activated sludge treatment of textile effluents. Biotechnol. Biotechnol. Equip. 2009, 23(1):1136-1142.
23. Hannemann F., Bichet A., Ewen K.M., Bernhardt R. Cytochrome P450 systems-biological variations of electron transport chains. Biochimica et Biophysica Acta - General Subjects 2007, 1770(3):330-344.
24. Hansen S.H., Stensballe A., Nielsen P.H., Herbst F.A. Metaproteomics: evaluation of protein extraction from activated sludge. Proteomics 2014, 14(21-22):2535-2539.
25. Helbling D., Ackermann M., Fenner K., Kohler H.-P., Johnson D. The activity level of a microbial community function can be predicted from its metatranscriptome. ISME J. 2012, 6(4):902-904.
26. Helbling D.E., Hollender J., Kohler H.-P.E., Fenner K. Structure-based interpretation of biotransformation pathways of amide-containing compounds in sludge-seeded bioreactors. Environ. Sci. Technol. 2010, 44(17):6628-6635.
27. Helbling D.E., Johnson D.R., Honti M., Fenner K. Micropollutant biotransformation kinetics associate with WWTP process parameters and microbial community characteristics. Environ. Sci. Technol. 2012, 46(19):10579-10588.
28. Jansson M., Olsson H., Pettersson K. Phosphatases; origin, characteristics and function in lakes. Hydrobiologia 1988, 170:157-175.
29. Jindrova E., Chocova M., Demnerova K., Brenner V. Bacterial aerobic degradation of benzene, toluene, ethylbenzene and xylene. Folia Microbiol. 2002, 47(2):83-93.
30. Johnson D.R., Helbling D.E., Men Y., Fenner K. Can meta-omics help to establish causality between contaminant biotransformations and genes or gene products?. Environ. Sci. Water Res. Technol. 2015, 1(3):272-278.
31. Joss A., Zabczynski S., Göbel A., Hoffmann B., Löffler D., McArdell C.S., Ternes T.A., Thomsen A., Siegrist H. Biological degradation of pharmaceuticals in municipal wastewater treatment: proposing a classification scheme. Water Res. 2006, 40(8):1686-1696.
32. Kaiser E., Prasse C., Wagner M., Broder K., Ternes T.A. Transformation of oxcarbazepine and human metabolites of carbamazepine and oxcarbazepine in wastewater treatment and sand filters. Environ. Sci. Technol. 2014, 48(17):10208-10216.
33. Kenneke J.F., Mazur C.S., Ritger S.E., Sack T.J. Mechanistic investigation of the noncytochrome P450-mediated metabolism of triadimefon to triadimenol in hepatic microsomes. Chem. Res. Toxicol. 2008, 21(10):1997-2004.
34. Khunjar W.O., Mackintosh S.A., Skotnicka-Pitak J., Baik S., Aga D.S., Love N.G. Elucidating the relative roles of ammonia oxidizing and heterotrophic bacteria during the biotransformation of 17 alpha-ethinylestradiol and trimethoprim. Environ. Sci. Technol. 2011, 45(8):3605-3612.
35. Kolvenbach B.A., Helbling D.E., Kohler H.-P.E., Corvini P.F.X. Emerging chemicals and the evolution of biodegradation capacities and pathways in bacteria. Curr. Opin. Biotechnol. 2014, 27:8-14.
36. Kormos J.L., Schulz M., Kohler H.-P.E., Ternes T.A. Biotransformation of selected iodinated X-ray contrast media and characterization of microbial transformation pathways. Environ. Sci. Technol. 2010, 44(13):4998-5007.
37. Llorca M., Rodriguez-Mozaz S., Couillerot O., Panigoni K., de Gunzburg J., Bayer S., Czaja R., Barcelo D. Identification of new transformation products during enzymatic treatment of tetracycline and erythromycin antibiotics at laboratory scale by an on-line turbulent flow liquid-chromatography coupled to a high resolution mass spectrometer LTQ-Orbitrap. Chemosphere 2015, 119:90-98.
38. Lolas I.B., Chen X., Bester K., Nielsen J.L. Identification of triclosan-degrading bacteria using stable isotope probing, fluorescence in situ hybridization and microautoradiography. Microbiology-Sgm 2012, 158:2796-2804.
39. Martin H.G., Ivanova N., Kunin V., Warnecke F., Barry K.W., McHardy A.C., Yeates C., He S., Salamov A.A., Szeto E., Dalin E., Putnam N.H., Shapiro H.J., Pangilinan J.L., Rigoutsos I., Kyrpides N.C., Blackall L.L., McMahon K.D., Hugenholtz P. Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities. Nat. Biotech. 2006, 24(10):1263-1269.
40. Mills C.L., Beuning P.J., Ondrechen M.J. Biochemical functional predictions for protein structures of unknown or uncertain function. Comput. Struct. Biotechnol. J. 2015, 13:182-191.
41. Nabarlatz, D., Stüber, F., Font, J., Fortuny, A., Fabregat, A. and Bengoa, C. Extraction and purification of hydrolytic enzymes from activated sludge. Resour. Conserv. Recy. (0).
42. Nabarlatz D., Stüber F., Font J., Fortuny A., Fabregat A., Bengoa C. Extraction and purification of hydrolytic enzymes from activated sludge. Resour. Conserv. Recy. 2012, 59(0):9-13.
43. Onesios K., Yu J., Bouwer E. Biodegradation and removal of pharmaceuticals and personal care products in treatment systems: a review. Biodegradation 2009, 20(4):441-466.
44. Pieper D.H., Martins dos Santos V.t.A.P., Golyshin P.N. Genomic and mechanistic insights into the biodegradation of organic pollutants. Curr. Opin. Biotechnol. 2004, 15(3):215-224.
45. Prasse C., Wagner M., Schulz R., Ternes T.A. Biotransformation of the antiviral drugs acyclovir and penciclovir in activated sludge treatment. Environ. Sci. Technol. 2011, 45(7):2761-2769.
46. Prior J.E., Shokati T., Christians U., Gill R.T. Identification and characterization of a bacterial cytochrome P450 for the metabolism of diclofenac. Appl. Microbiol. Biotechnol. 2009, 85(3):625-633.
47. Radjenović J., Pérez S., Petrović M., Barceló D. Identification and structural characterization of biodegradation products of atenolol and glibenclamide by liquid chromatography coupled to hybrid quadrupole time-of-flight and quadrupole ion trap mass spectrometry. J. Chromatogr. A 2008, 1210(2):142-153.
48. Ras M., Girbal-Neuhauser E., Paul E., Spérandio M., Lefebvre D. Protein extraction from activated sludge: an analytical approach. Water Res. 2008, 42(8-9):1867-1878.
49. Rawlings N.D., Waller M., Barrett A.J., Bateman A. MEROPS: the database of proteolytic enzymes, their substrates and inhibitors. Nucleic Acids Res. 2014, 42(D1):D503-D509.
50. Richard R.B. Methods in Enzymology 2009, 331-342. Academic Press. R.B. Richard, P.D. Murray (Eds.).
51. Rühmland S., Wick A., Ternes T.A., Barjenbruch M. Fate of pharmaceuticals in a subsurface flow constructed wetland and two ponds. Ecol. Eng. 2015, 80:125-139.
52. Schulz M., Löffler D., Wagner M., Ternes T.A. Transformation of the X-ray contrast medium iopromide in soil and biological wastewater treatment. Environ. Sci. Technol. 2008, 42(19):7207-7217.
53. Smith P.K., Krohn R.I., Hermanson G.T., Mallia A.K., Gartner F.H., Provenzano M.D., Fujimoto E.K., Goeke N.M., Olson B.J., Klenk D.C. Measurement of protein using bicinchoninic acid. Anal. Biochem. 1985, 150(1):76-85.
54. Speers A.E., Wu C.C. Proteomics of integral membrane proteins theory and application. Chem. Rev. 2007, 107(8):3687-3714.
55. Summers R.M., Louie T.M., Yu C.L., Subramanian M. Characterization of a broad-specificity non-haem iron N-demethylase from Pseudomonas putida CBB5 capable of utilizing several purine alkaloids as sole carbon and nitrogen source. Microbiology 2011, 157(2):583-592.
56. Vanwonterghem I., Jensen P.D., Ho D.P., Batstone D.J., Tyson G.W. Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques. Curr. Opin. Biotechnol. 2014, 27(0):55-64.
57. Weckbecker A., Groeger H., Hummel W., Gröger H., Wittmann C., Krull R. Regeneration of nicotinamide coenzymes: principles and applications for the synthesis of chiral compounds. Biosyst. Eng. I 2010.
58. Wick A., Wagner M., Ternes T.A. Elucidation of the transformation pathway of the opium alkaloid codeine in biological wastewater treatment. Environ. Sci. Technol. 2011, 45(8):3374-3385.
59. Wilmes P., Andersson A.F., Lefsrud M.G., Wexler M., Shah M., Zhang B., Hettich R.L., Bond P.L., VerBerkmoes N.C., Banfield J.F. Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal. ISME J. 2008, 2(8):853-864.
60. Xu L.H., Ikeda H., Liu L., Arakawa T., Wakagi T., Shoun H., Fushinobu S. Structural basis for the 4'-hydroxylation of diclofenac by a microbial cytochrome P450 monooxygenase. Appl. Microbiol. Biotechnol. 2015, 99(7):3081-3091.
61. Yu G.-H., He P.-J., Shao L.-M., Lee D.-J. Enzyme activities in activated sludge flocs. Appl. Microbiol. Biotechnol. 2007, 77(3):605-612.
62. Zhang P., Shen Y., Guo J.-S., Li C., Wang H., Chen Y.-P., Yan P., Yang J.-X., Fang F. Extracellular protein analysis of activated sludge and their functions in wastewater treatment plant by shotgun proteomics. Sci. Rep. 2015, 5:12041.