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Volumn , Issue , 2015, Pages 127-130

Fast alignment filtering of nanopore sequencing reads using locality-sensitive hashing

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; GENES; LAPTOP COMPUTERS; NANOPORES;

EID: 84962376482     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/BIBM.2015.7359668     Document Type: Conference Paper
Times cited : (3)

References (13)
  • 1
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    • Mapping single molecule sequencing reads using basic local alignment with successive refinement (blasr): Application and theory
    • M. Chaisson and G. Tesler, "Mapping single molecule sequencing reads using basic local alignment with successive refinement (blasr): Application and theory, " BMC Biolriformatics, vol. 13, no. 1, p. 238, 2012.
    • (2012) BMC Biolriformatics , vol.13 , Issue.1 , pp. 238
    • Chaisson, M.1    Tesler, G.2
  • 2
    • 84930851165 scopus 로고    scopus 로고
    • Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
    • 06
    • K. Berlin, S. Koren, C.-S. Chin, J. P. Drake, J. M. Landolin, and A. M. P hillippy, "Assembling large genomes with single-molecule sequencing and locality-sensitive hashing, " Nat Biotech, vol. 33, no. 6, pp. 623-630, 06 2015.
    • (2015) Nat Biotech , vol.33 , Issue.6 , pp. 623-630
    • Berlin, K.1    Koren, S.2    Chin, C.-S.3    Drake, J.P.4    Landolin, J.M.5    Hillippy, A.M.P.6
  • 4
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • 3
    • T. F. Smith and M. S. Waterman, "Identification of common molecular subsequences, " Journal of Molecular Biology, vol. 147, no. 1, pp. 195-197, 3 1981.
    • (1981) Journal of Molecular Biology , vol.147 , Issue.1 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 9
    • 84942520038 scopus 로고    scopus 로고
    • A reference bacterial genome dataset generated on the miniontm portable single-molecule nanopore sequencer
    • J. Quick, A. Quinlan, and N. Loman, "A reference bacterial genome dataset generated on the miniontm portable single-molecule nanopore sequencer, " GigaScience, vol. 3, no. 1, p. 22, 2014.
    • (2014) GigaScience , vol.3 , Issue.1 , pp. 22
    • Quick, J.1    Quinlan, A.2    Loman, N.3
  • 10
    • 84946557268 scopus 로고    scopus 로고
    • Oxford nanopore sequencing hybrid error correction and de novo assembly of a eukaryotic genome
    • S. Goodwin, J. Gurtowski, S. Ethe-Sayers, P. Deshpande, M. Schatz, and W. R. McCombie, "Oxford nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome, " bioRxiv, 07 2015.
    • BioRxiv , vol.7 , pp. 2015
    • Goodwin, S.1    Gurtowski, J.2    Ethe-Sayers, S.3    Deshpande, P.4    Schatz, M.5    McCombie, W.R.6
  • 11
    • 84958554065 scopus 로고    scopus 로고
    • Efficient local alignment discovery amongst noisy long reads
    • E. Myers, "Efficient local alignment discovery amongst noisy long reads;' Algorithms in BioInformatics, vol. 8701, pp. 52-67, 2014.
    • (2014) Algorithms in BioInformatics , vol.8701 , pp. 52-67
    • Myers, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.