메뉴 건너뛰기




Volumn 215, Issue 2, 2016, Pages 227.e1-227.e16

Clinical validation of a noninvasive prenatal test for genomewide detection of fetal copy number variants

Author keywords

cell free DNA; chromosomal copy number variant; genomewide; microdeletions; noninvasive prenatal testing; subchromosomal copy number variant

Indexed keywords

ADOLESCENT; ADULT; ARTICLE; CHROMOSOME ABERRATION; COPY NUMBER VARIATION; DIAGNOSTIC TEST ACCURACY STUDY; FEMALE; FETUS KARYOTYPING; GENE LOSS; GENETIC GAIN; HUMAN; MATERNAL PLASMA; NON INVASIVE PROCEDURE; NONINVASIVE PRENATAL TEST; PRENATAL SCREENING; PRIORITY JOURNAL; RETROSPECTIVE STUDY; SCREENING; SENSITIVITY AND SPECIFICITY; SEX CHROMOSOME ABERRATION; SEX DETERMINATION; TRISOMY 13; TRISOMY 18; TRISOMY 21; VALIDATION STUDY; CHROMOSOME DISORDERS; DIAGNOSTIC IMAGING; DNA SEQUENCE; HIGH THROUGHPUT SEQUENCING; KARYOTYPING; MATERNAL AGE; MIDDLE AGED; PREGNANCY; PRENATAL DIAGNOSIS; PROCEDURES; YOUNG ADULT;

EID: 84961857091     PISSN: 00029378     EISSN: 10976868     Source Type: Journal    
DOI: 10.1016/j.ajog.2016.02.030     Document Type: Article
Times cited : (150)

References (27)
  • 1
    • 84939629649 scopus 로고    scopus 로고
    • Cell-free DNA screening for fetal aneuploidy. Committee opinion no. 640
    • 1 ACOG. Cell-free DNA screening for fetal aneuploidy. Committee opinion no. 640. Obstet Gynecol 126 (2015), e31–e37.
    • (2015) Obstet Gynecol , vol.126 , pp. e31-e37
  • 2
    • 84931095759 scopus 로고    scopus 로고
    • Cell free DNA analysis vs sequential screening as primary testing considering all fetal chromosomal abnormalities
    • 2 Norton, M.E., Wapner, R.J., Kuppermann, M., Jelliffe-Pawlowski, L.L., Currier, R.J., Cell free DNA analysis vs sequential screening as primary testing considering all fetal chromosomal abnormalities. Am J Obstet Gynecol, 212(1), 2015, S2.
    • (2015) Am J Obstet Gynecol , vol.212 , Issue.1 , pp. S2
    • Norton, M.E.1    Wapner, R.J.2    Kuppermann, M.3    Jelliffe-Pawlowski, L.L.4    Currier, R.J.5
  • 3
    • 84925581764 scopus 로고    scopus 로고
    • Chromosome abnormalities detected by current prenatal screening and noninvasive prenatal testing
    • 3 Norton, M.E., Jelliffe-Pawlowski, L.L., Currier, R.J., Chromosome abnormalities detected by current prenatal screening and noninvasive prenatal testing. Obstet Gynecol 124 (2014), 979–986.
    • (2014) Obstet Gynecol , vol.124 , pp. 979-986
    • Norton, M.E.1    Jelliffe-Pawlowski, L.L.2    Currier, R.J.3
  • 4
    • 84859894558 scopus 로고    scopus 로고
    • Rare chromosome abnormalities, prevalence and prenatal diagnosis rates from population-based congenital anomaly registers in Europe
    • 4 Wellesley, D., Dolk, H., Boyd, P.A., et al. Rare chromosome abnormalities, prevalence and prenatal diagnosis rates from population-based congenital anomaly registers in Europe. Eur J Hum Genet 20 (2012), 521–526.
    • (2012) Eur J Hum Genet , vol.20 , pp. 521-526
    • Wellesley, D.1    Dolk, H.2    Boyd, P.A.3
  • 5
    • 84943267089 scopus 로고    scopus 로고
    • Clinical outcome of subchromosomal events detected by whole-genome noninvasive prenatal testing
    • 5 Helgeson, J., Wardrop, J., Boomer, T., et al. Clinical outcome of subchromosomal events detected by whole-genome noninvasive prenatal testing. Prenat Diagn 35 (2015), 999–1004.
    • (2015) Prenat Diagn , vol.35 , pp. 999-1004
    • Helgeson, J.1    Wardrop, J.2    Boomer, T.3
  • 6
    • 84925707774 scopus 로고    scopus 로고
    • Detection of fetal subchromosomal abnormalities by sequencing circulating cell-free DNA from maternal plasma
    • 6 Zhao, C., Tynan, J., Ehrich, M., et al. Detection of fetal subchromosomal abnormalities by sequencing circulating cell-free DNA from maternal plasma. Clin Chem 61 (2015), 608–616.
    • (2015) Clin Chem , vol.61 , pp. 608-616
    • Zhao, C.1    Tynan, J.2    Ehrich, M.3
  • 7
    • 84981231456 scopus 로고    scopus 로고
    • Noninvasive detection of fetal subchromosomal abnormalities by semiconductor sequencing of maternal plasma DNA
    • 7 Yin, A.H., Peng, C.F., Zhao, X., et al. Noninvasive detection of fetal subchromosomal abnormalities by semiconductor sequencing of maternal plasma DNA. Proc Natl Acad Sci USA 112 (2015), 14670–14675.
    • (2015) Proc Natl Acad Sci USA , vol.112 , pp. 14670-14675
    • Yin, A.H.1    Peng, C.F.2    Zhao, X.3
  • 8
    • 84905571246 scopus 로고    scopus 로고
    • Fetoplacental mosaicism: potential implications for false-positive and false-negative noninvasive prenatal screening results
    • 8 Grati, F.R., Malvestiti, F., Ferreira, J.C., et al. Fetoplacental mosaicism: potential implications for false-positive and false-negative noninvasive prenatal screening results. Genet Med 16 (2014), 620–624.
    • (2014) Genet Med , vol.16 , pp. 620-624
    • Grati, F.R.1    Malvestiti, F.2    Ferreira, J.C.3
  • 9
    • 77955255742 scopus 로고    scopus 로고
    • Sensitivity of noninvasive prenatal detection of fetal aneuploidy from maternal plasma using shotgun sequencing is limited only by counting statistics
    • 9 Fan, H.C., Quake, S.R., Sensitivity of noninvasive prenatal detection of fetal aneuploidy from maternal plasma using shotgun sequencing is limited only by counting statistics. PLoS One, 5, 2010, e10439.
    • (2010) PLoS One , vol.5 , pp. e10439
    • Fan, H.C.1    Quake, S.R.2
  • 10
    • 84921809448 scopus 로고    scopus 로고
    • Noninvasive detection of a balanced fetal translocation from maternal plasma
    • 10 Jensen, T.J., Kim, S.K., van den Boom, D., Deciu, C., Ehrich, M., Noninvasive detection of a balanced fetal translocation from maternal plasma. Clin Chem 60 (2014), 1298–1305.
    • (2014) Clin Chem , vol.60 , pp. 1298-1305
    • Jensen, T.J.1    Kim, S.K.2    van den Boom, D.3    Deciu, C.4    Ehrich, M.5
  • 11
    • 84873711791 scopus 로고    scopus 로고
    • Noninvasive detection of fetal subchromosome abnormalities via deep sequencing of maternal plasma
    • 11 Srinivasan, A., Bianchi, D.W., Huang, H., Sehnert, A.J., Rava, R.P., Noninvasive detection of fetal subchromosome abnormalities via deep sequencing of maternal plasma. Am J Hum Genet 92 (2013), 167–176.
    • (2013) Am J Hum Genet , vol.92 , pp. 167-176
    • Srinivasan, A.1    Bianchi, D.W.2    Huang, H.3    Sehnert, A.J.4    Rava, R.P.5
  • 12
    • 80955166920 scopus 로고    scopus 로고
    • Noninvasive prenatal diagnosis of a fetal microdeletion syndrome
    • 12 Peters, D., Chu, T., Yatsenko, S.A., et al. Noninvasive prenatal diagnosis of a fetal microdeletion syndrome. N Engl J Med 365 (2011), 1847–1848.
    • (2011) N Engl J Med , vol.365 , pp. 1847-1848
    • Peters, D.1    Chu, T.2    Yatsenko, S.A.3
  • 13
    • 84982198355 scopus 로고    scopus 로고
    • Drug Administration. Guidance on informed consent for in vitro diagnostic device studies using leftover human specimens that are not individually identifiable. Guidance for Sponsors, Institutional Review Boards, Clinical Investigators and FDA Staff. OMB Control 0910-0582
    • 13 US Food and Drug Administration. Guidance on informed consent for in vitro diagnostic device studies using leftover human specimens that are not individually identifiable. Guidance for Sponsors, Institutional Review Boards, Clinical Investigators and FDA Staff. OMB Control 0910-0582 (2006).
    • (2006)
    • Food, U.S.1
  • 14
    • 84956674299 scopus 로고    scopus 로고
    • Application of risk score analysis to low-coverage whole genome sequencing data for the noninvasive detection of trisomy 21, trisomy 18, and trisomy 13
    • 14 Tynan, J., Kim, S., Mazloom, A., et al. Application of risk score analysis to low-coverage whole genome sequencing data for the noninvasive detection of trisomy 21, trisomy 18, and trisomy 13. Prenat Diagn 36 (2016), 56–62.
    • (2016) Prenat Diagn , vol.36 , pp. 56-62
    • Tynan, J.1    Kim, S.2    Mazloom, A.3
  • 15
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • 15 Langmead, B., Salzberg, S.L., Fast gapped-read alignment with Bowtie 2. Nat Methods 9 (2012), 357–359.
    • (2012) Nat Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 16
    • 84938750492 scopus 로고    scopus 로고
    • Determination of fetal DNA fraction from the plasma of pregnant women using sequence read counts
    • 16 Kim, S.K., Hannum, G., Geis, J., et al. Determination of fetal DNA fraction from the plasma of pregnant women using sequence read counts. Prenat Diagn 35 (2015), 810–815.
    • (2015) Prenat Diagn , vol.35 , pp. 810-815
    • Kim, S.K.1    Hannum, G.2    Geis, J.3
  • 17
    • 3543105225 scopus 로고    scopus 로고
    • Circular binary segmentation for the analysis of array-based DNA copy number data
    • 17 Olshen, A.B., Venkatraman, E., Lucito, R., Wigler, M., Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5 (2004), 557–572.
    • (2004) Biostatistics , vol.5 , pp. 557-572
    • Olshen, A.B.1    Venkatraman, E.2    Lucito, R.3    Wigler, M.4
  • 18
    • 27944455289 scopus 로고    scopus 로고
    • A comparison study: applying segmentation to array CGH data for downstream analyses
    • 18 Willenbrock, H., Fridlyand, J., A comparison study: applying segmentation to array CGH data for downstream analyses. Bioinformatics 21 (2005), 4084–4091.
    • (2005) Bioinformatics , vol.21 , pp. 4084-4091
    • Willenbrock, H.1    Fridlyand, J.2
  • 19
    • 84907717938 scopus 로고    scopus 로고
    • Non-invasive prenatal chromosomal aneuploidy testing–clinical experience: 100,000 clinical samples
    • 19 McCullough, R.M., Almasri, E.A., Guan, X., et al. Non-invasive prenatal chromosomal aneuploidy testing–clinical experience: 100,000 clinical samples. PLoS One, 9, 2014, e109173.
    • (2014) PLoS One , vol.9 , pp. e109173
    • McCullough, R.M.1    Almasri, E.A.2    Guan, X.3
  • 20
    • 84878152406 scopus 로고    scopus 로고
    • Noninvasive prenatal detection of sex chromosomal aneuploidies by sequencing circulating cell-free DNA from maternal plasma
    • 20 Mazloom, A.R., Džakula, Ž., Oeth, P., et al. Noninvasive prenatal detection of sex chromosomal aneuploidies by sequencing circulating cell-free DNA from maternal plasma. Prenat Diagn 33 (2013), 591–597.
    • (2013) Prenat Diagn , vol.33 , pp. 591-597
    • Mazloom, A.R.1    Džakula, Ž.2    Oeth, P.3
  • 21
    • 84891822473 scopus 로고    scopus 로고
    • Maternal mosaicism is a significant contributor to discordant sex chromosomal aneuploidies associated with noninvasive prenatal testing
    • 21 Wang, Y., Chen, Y., Tian, F., et al. Maternal mosaicism is a significant contributor to discordant sex chromosomal aneuploidies associated with noninvasive prenatal testing. Clin Chem 60 (2014), 251–259.
    • (2014) Clin Chem , vol.60 , pp. 251-259
    • Wang, Y.1    Chen, Y.2    Tian, F.3
  • 22
    • 0019980795 scopus 로고
    • Trisomy 17p due to a t(5; 17)(p15; p11) pat translocation
    • 22 Jinno, Y., Matsuda, I., Kajii, T., Trisomy 17p due to a t(5; 17)(p15; p11) pat translocation. Ann Genet 25 (1982), 123–125.
    • (1982) Ann Genet , vol.25 , pp. 123-125
    • Jinno, Y.1    Matsuda, I.2    Kajii, T.3
  • 23
    • 0004146487 scopus 로고
    • Simultaneous statistical inference
    • 2nd ed. Springer-Verlag New York
    • 23 Miller, R.G., Simultaneous statistical inference. 2nd ed., 1981, Springer-Verlag, New York.
    • (1981)
    • Miller, R.G.1
  • 24
    • 84924766673 scopus 로고    scopus 로고
    • Expanding the scope of noninvasive prenatal testing: detection of fetal microdeletion syndromes
    • 24 Wapner, R.J., Babiarz, J.E., Levy, B., et al. Expanding the scope of noninvasive prenatal testing: detection of fetal microdeletion syndromes. Am J Obstet Gynecol 212 (2015), 332.e1–332.e9.
    • (2015) Am J Obstet Gynecol , vol.212 , pp. 332.e1-332.e9
    • Wapner, R.J.1    Babiarz, J.E.2    Levy, B.3
  • 25
    • 80755172331 scopus 로고    scopus 로고
    • DNA sequencing of maternal plasma to detect Down syndrome: an international clinical validation study
    • 25 Palomaki, G.E., Kloza, E.M., Lambert-Messerlian, G.M., et al. DNA sequencing of maternal plasma to detect Down syndrome: an international clinical validation study. Genet Med 13 (2011), 913–920.
    • (2011) Genet Med , vol.13 , pp. 913-920
    • Palomaki, G.E.1    Kloza, E.M.2    Lambert-Messerlian, G.M.3
  • 26
    • 84870549609 scopus 로고    scopus 로고
    • Chromosomal microarray versus karyotyping for prenatal diagnosis
    • 26 Wapner, R.J., Martin, C.L., Levy, B., et al. Chromosomal microarray versus karyotyping for prenatal diagnosis. N Engl J Med 367 (2012), 2175–2184.
    • (2012) N Engl J Med , vol.367 , pp. 2175-2184
    • Wapner, R.J.1    Martin, C.L.2    Levy, B.3
  • 27
    • 84866999347 scopus 로고    scopus 로고
    • Experience with microarray-based comparative genomic hybridization for prenatal diagnosis in over 5000 pregnancies
    • 27 Shaffer, L.G., Dabell, M.P., Fisher, A.J., et al. Experience with microarray-based comparative genomic hybridization for prenatal diagnosis in over 5000 pregnancies. Prenat Diagn 32 (2012), 976–985.
    • (2012) Prenat Diagn , vol.32 , pp. 976-985
    • Shaffer, L.G.1    Dabell, M.P.2    Fisher, A.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.