메뉴 건너뛰기




Volumn 78, Issue , 2016, Pages 57-61

Clinical evaluation of a single-reaction real-time RT-PCR for pan-dengue and chikungunya virus detection

Author keywords

Background; Chikungunya virus; Dengue virus; Molecular diagnostics; Multiplex real time RT PCR

Indexed keywords

ARTICLE; CHIKUNGUNYA VIRUS; DENGUE VIRUS; GENE SEQUENCE; HUMAN; NONHUMAN; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; VIRUS DETECTION; VIRUS LOAD; CHIKUNGUNYA FEVER; CHILD; DENGUE; EVALUATION STUDY; MOLECULAR DIAGNOSIS; MULTIPLEX POLYMERASE CHAIN REACTION; NICARAGUA; PRESCHOOL CHILD; PROCEDURES; REAL TIME POLYMERASE CHAIN REACTION;

EID: 84960847818     PISSN: 13866532     EISSN: 18735967     Source Type: Journal    
DOI: 10.1016/j.jcv.2016.01.007     Document Type: Article
Times cited : (47)

References (30)
  • 1
    • 77953336251 scopus 로고    scopus 로고
    • Chikungunya
    • Powers A.M. Chikungunya. Clin. Lab. Med. 2010, 30:209-219.
    • (2010) Clin. Lab. Med. , vol.30 , pp. 209-219
    • Powers, A.M.1
  • 5
    • 84866911884 scopus 로고    scopus 로고
    • Simple clinical and laboratory predictors of chikungunya versus dengue infections in adults
    • Lee V.J., Chow A., Zheng X., Carrasco L.R., Cook A.R., Lye D.C., et al. Simple clinical and laboratory predictors of chikungunya versus dengue infections in adults. PLoS Negl. Trop. Dis. 2012, 6:e1786.
    • (2012) PLoS Negl. Trop. Dis. , vol.6 , pp. e1786
    • Lee, V.J.1    Chow, A.2    Zheng, X.3    Carrasco, L.R.4    Cook, A.R.5    Lye, D.C.6
  • 6
    • 84872415495 scopus 로고    scopus 로고
    • Chikungunya infection in Malaysia: comparison with dengue infection in adults and predictors of persistent arthralgia
    • Mohd Zim M.A., Sam I.C., Omar S.F., Chan Y.F., AbuBakar S., Kamarulzaman A. Chikungunya infection in Malaysia: comparison with dengue infection in adults and predictors of persistent arthralgia. J. Clin. Virol. 2013, 56:141-145.
    • (2013) J. Clin. Virol. , vol.56 , pp. 141-145
    • Mohd Zim, M.A.1    Sam, I.C.2    Omar, S.F.3    Chan, Y.F.4    AbuBakar, S.5    Kamarulzaman, A.6
  • 10
    • 0026580422 scopus 로고
    • Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction
    • Lanciotti R.S., Calisher C.H., Gubler D.J., Chang G.J., Vorndam V. Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction. J. Clin. Micobiol. 1992, 30:545-551.
    • (1992) J. Clin. Micobiol. , vol.30 , pp. 545-551
    • Lanciotti, R.S.1    Calisher, C.H.2    Gubler, D.J.3    Chang, G.J.4    Vorndam, V.5
  • 11
    • 67349150737 scopus 로고    scopus 로고
    • Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses
    • Leparc-Goffart I., Baragatti M., Temmam S., Tuiskunen A., Moureau G., Charrel R., et al. Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses. J. Clin. Virol. 2009, 45:61-66.
    • (2009) J. Clin. Virol. , vol.45 , pp. 61-66
    • Leparc-Goffart, I.1    Baragatti, M.2    Temmam, S.3    Tuiskunen, A.4    Moureau, G.5    Charrel, R.6
  • 12
    • 84879454509 scopus 로고    scopus 로고
    • Development of an internally controlled real-time reverse transcriptase PCR assay for pan-dengue virus detection and comparison of four molecular dengue virus detection assays
    • Waggoner J.J., Abeynayake J., Sahoo M.K., Gresh L., Tellez Y., Gonzalez K., et al. Development of an internally controlled real-time reverse transcriptase PCR assay for pan-dengue virus detection and comparison of four molecular dengue virus detection assays. J. Clin. Microbiol. 2013, 51:2172-2181.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 2172-2181
    • Waggoner, J.J.1    Abeynayake, J.2    Sahoo, M.K.3    Gresh, L.4    Tellez, Y.5    Gonzalez, K.6
  • 13
    • 84876824320 scopus 로고    scopus 로고
    • Single-reaction, multiplex, real-time rt-PCR for the detection, quantitation, and serotyping of dengue viruses
    • Waggoner J.J., Abeynayake J., Sahoo M.K., Gresh L., Tellez Y., Gonzalez K., et al. Single-reaction, multiplex, real-time rt-PCR for the detection, quantitation, and serotyping of dengue viruses. PLoS Negl. Trop. Dis. 2013, 7:e2116.
    • (2013) PLoS Negl. Trop. Dis. , vol.7 , pp. e2116
    • Waggoner, J.J.1    Abeynayake, J.2    Sahoo, M.K.3    Gresh, L.4    Tellez, Y.5    Gonzalez, K.6
  • 14
    • 34547657627 scopus 로고    scopus 로고
    • Development of a sensitive real-time reverse transcriptase PCR assay with an internal control to detect and quantify chikungunya virus
    • Laurent P., Le Roux K., Grivard P., Bertil G., Naze F., Picard M., et al. Development of a sensitive real-time reverse transcriptase PCR assay with an internal control to detect and quantify chikungunya virus. Clin. Chem. 2007, 53:1408-1414.
    • (2007) Clin. Chem. , vol.53 , pp. 1408-1414
    • Laurent, P.1    Le Roux, K.2    Grivard, P.3    Bertil, G.4    Naze, F.5    Picard, M.6
  • 15
    • 84878803173 scopus 로고    scopus 로고
    • The role of innate versus adaptive immune responses in a mouse model of O'nyong-nyong virus infection
    • Seymour R.L., Rossi S.L., Bergren N.A., Plante K.S., Weaver S.C. The role of innate versus adaptive immune responses in a mouse model of O'nyong-nyong virus infection. Am. J. Trop. Med. Hyg. 2013, 88:1170-1179.
    • (2013) Am. J. Trop. Med. Hyg. , vol.88 , pp. 1170-1179
    • Seymour, R.L.1    Rossi, S.L.2    Bergren, N.A.3    Plante, K.S.4    Weaver, S.C.5
  • 16
    • 84901675887 scopus 로고    scopus 로고
    • A multiplex nucleic acid amplification test for the diagnosis of dengue, malaria, and leptospirosis
    • Waggoner J.J., Abeynayake J., Balassiano I., Lefterova M., Sahoo M.K., Liu Y., et al. A multiplex nucleic acid amplification test for the diagnosis of dengue, malaria, and leptospirosis. J. Clin. Microbiol. 2014, 52:2011-2018.
    • (2014) J. Clin. Microbiol. , vol.52 , pp. 2011-2018
    • Waggoner, J.J.1    Abeynayake, J.2    Balassiano, I.3    Lefterova, M.4    Sahoo, M.K.5    Liu, Y.6
  • 17
    • 77954605045 scopus 로고    scopus 로고
    • Validation of laboratory-developed molecular assays for infectious diseases
    • Burd E.M. Validation of laboratory-developed molecular assays for infectious diseases. Clin. Microbiol. Rev. 2010, 23:550-576.
    • (2010) Clin. Microbiol. Rev. , vol.23 , pp. 550-576
    • Burd, E.M.1
  • 18
    • 29844442454 scopus 로고    scopus 로고
    • Differences in dengue severity in infants, children, and adults in a 3-year hospital-based study in Nicaragua
    • Hammond S.N., Balmaseda A., Perez L., Tellez Y., Saborio S.I., Mercado J.C., et al. Differences in dengue severity in infants, children, and adults in a 3-year hospital-based study in Nicaragua. Am. J. Trop. Med. Hyg. 2005, 73:1063.
    • (2005) Am. J. Trop. Med. Hyg. , vol.73 , pp. 1063
    • Hammond, S.N.1    Balmaseda, A.2    Perez, L.3    Tellez, Y.4    Saborio, S.I.5    Mercado, J.C.6
  • 19
    • 0034449596 scopus 로고    scopus 로고
    • Clinical, epidemiologic, and virologic features of dengue in the 1998 epidemic in Nicaragua
    • Harris E., Videa E., Perez L., Sandoval E., Tellez Y., Perez M.L., et al. Clinical, epidemiologic, and virologic features of dengue in the 1998 epidemic in Nicaragua. Am. J. Trop. Med. Hyg. 2000, 63:5-11.
    • (2000) Am. J. Trop. Med. Hyg. , vol.63 , pp. 5-11
    • Harris, E.1    Videa, E.2    Perez, L.3    Sandoval, E.4    Tellez, Y.5    Perez, M.L.6
  • 20
    • 67650034892 scopus 로고    scopus 로고
    • The Nicaraguan pediatric dengue cohort study: study design, methods, use of information technology, and extension to other infectious diseases
    • Kuan G., Gordon A., Aviles W., Ortega O., Hammond S.N., Elizondo D., et al. The Nicaraguan pediatric dengue cohort study: study design, methods, use of information technology, and extension to other infectious diseases. Am. J. Epidemiol. 2009, 170:120-129.
    • (2009) Am. J. Epidemiol. , vol.170 , pp. 120-129
    • Kuan, G.1    Gordon, A.2    Aviles, W.3    Ortega, O.4    Hammond, S.N.5    Elizondo, D.6
  • 21
    • 84884678592 scopus 로고    scopus 로고
    • The Nicaraguan pediatric dengue cohort study: incidence of inapparent and symptomatic dengue virus infections, 2004-2010
    • Gordon A., Kuan G., Mercado J.C., Gresh L., Aviles W., Balmaseda A., et al. The Nicaraguan pediatric dengue cohort study: incidence of inapparent and symptomatic dengue virus infections, 2004-2010. PLoS Negl. Trop. Dis. 2013, 7:e2462.
    • (2013) PLoS Negl. Trop. Dis. , vol.7 , pp. e2462
    • Gordon, A.1    Kuan, G.2    Mercado, J.C.3    Gresh, L.4    Aviles, W.5    Balmaseda, A.6
  • 22
    • 78649349498 scopus 로고    scopus 로고
    • Evaluating assay precision
    • Chesher D. Evaluating assay precision. Clin. Biochem. Rev. 2008, 29(Suppl. 1):S23-6.
    • (2008) Clin. Biochem. Rev. , vol.29 , pp. S23-S26
    • Chesher, D.1
  • 23
    • 84925357929 scopus 로고    scopus 로고
    • Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses
    • Cecilia D., Kakade M., Alagarasu K., Patil J., Salunke A., Parashar D., et al. Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses. Arch. Virol. 2015, 160:323-327.
    • (2015) Arch. Virol. , vol.160 , pp. 323-327
    • Cecilia, D.1    Kakade, M.2    Alagarasu, K.3    Patil, J.4    Salunke, A.5    Parashar, D.6
  • 24
    • 49549104869 scopus 로고    scopus 로고
    • Development and evaluation of a 1-step duplex reverse transcription polymerase chain reaction for differential diagnosis of chikungunya and dengue infection
    • Dash P.K., Parida M., Santhosh S.R., Saxena P., Srivastava A., Neeraja M., et al. Development and evaluation of a 1-step duplex reverse transcription polymerase chain reaction for differential diagnosis of chikungunya and dengue infection. Diagn. Microbiol. Infect. Dis. 2008, 62:52-57.
    • (2008) Diagn. Microbiol. Infect. Dis. , vol.62 , pp. 52-57
    • Dash, P.K.1    Parida, M.2    Santhosh, S.R.3    Saxena, P.4    Srivastava, A.5    Neeraja, M.6
  • 25
    • 80052837736 scopus 로고    scopus 로고
    • Utility of multiplex reverse transcriptase-polymerase chain reaction for diagnosis and serotypic characterization of dengue and chikungunya viruses in clinical samples
    • Mishra B., Sharma M., Pujhari S.K., Ratho R.K., Gopal D.S., Kumar C.N., et al. Utility of multiplex reverse transcriptase-polymerase chain reaction for diagnosis and serotypic characterization of dengue and chikungunya viruses in clinical samples. Diagn. Microbiol. Infect. Dis. 2011, 71:118-125.
    • (2011) Diagn. Microbiol. Infect. Dis. , vol.71 , pp. 118-125
    • Mishra, B.1    Sharma, M.2    Pujhari, S.K.3    Ratho, R.K.4    Gopal, D.S.5    Kumar, C.N.6
  • 26
    • 70349757159 scopus 로고    scopus 로고
    • Simultaneous detection and quantitation of chikungunya, dengue and West Nile viruses by multiplex RT-PCR assays and dengue virus typing using high resolution melting
    • Naze F., Le Roux K., Schuffenecker I., Zeller H., Staikowsky F., Grivard P., et al. Simultaneous detection and quantitation of chikungunya, dengue and West Nile viruses by multiplex RT-PCR assays and dengue virus typing using high resolution melting. J. Virol. Meth. 2009, 162:1.
    • (2009) J. Virol. Meth. , vol.162 , pp. 1
    • Naze, F.1    Le Roux, K.2    Schuffenecker, I.3    Zeller, H.4    Staikowsky, F.5    Grivard, P.6
  • 28
    • 84882671526 scopus 로고    scopus 로고
    • Development of rapid, sensitive one-tube duplex RT-PCR assay for specific and differential diagnosis of chikungunya and dengue
    • Saha K., Firdaus R., Chakrabarti S., Sadhukhan P.C. Development of rapid, sensitive one-tube duplex RT-PCR assay for specific and differential diagnosis of chikungunya and dengue. J. Virol. Methods 2013, 193:521-524.
    • (2013) J. Virol. Methods , vol.193 , pp. 521-524
    • Saha, K.1    Firdaus, R.2    Chakrabarti, S.3    Sadhukhan, P.C.4
  • 29
    • 84884809277 scopus 로고    scopus 로고
    • Comparison of the FDA-approved CDC DENV-1-4 real-time reverse transcription-PCR with a laboratory-developed assay for dengue virus detection and serotyping
    • Waggoner J.J., Abeynayake J., Sahoo M.K., Gresh L., Tellez Y., Gonzalez K., et al. Comparison of the FDA-approved CDC DENV-1-4 real-time reverse transcription-PCR with a laboratory-developed assay for dengue virus detection and serotyping. J. Clin. Microbiol. 2013, 51:3418-3420.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 3418-3420
    • Waggoner, J.J.1    Abeynayake, J.2    Sahoo, M.K.3    Gresh, L.4    Tellez, Y.5    Gonzalez, K.6
  • 30
    • 84255168505 scopus 로고    scopus 로고
    • Dynamics of dengue disease severity determined by the interplay between viral genetics and serotype-specific immunity
    • 114ra28
    • OhAinle M., Balmaseda A., Macalalad A.R., Tellez Y., Zody M.C., Saborio S., et al. Dynamics of dengue disease severity determined by the interplay between viral genetics and serotype-specific immunity. Sci. Transl. Med. 2011, 3:114ra28.
    • (2011) Sci. Transl. Med. , vol.3
    • OhAinle, M.1    Balmaseda, A.2    Macalalad, A.R.3    Tellez, Y.4    Zody, M.C.5    Saborio, S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.