Cryptic hepatitis B and e in patients with acute hepatitis of unknown etiology

Journal of Infectious Diseases

Volumn 212, Issue 12, 2015, Pages 1962-1969

  Ganova Raeva, Lilia ^a   Punkova, Lili ^a   Campo, David S ^a   Dimitrova, Zoya ^a   Skums, Pavel ^a   Vu, Nga H ^b   Dat, Do T ^b   Dalton, Harry R ^c   Khudyakov, Yury ^a  

^a CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^b National Institute of Hygiene and Epidemiology   (South Africa)

^c UNIVERSITY OF EXETER MEDICAL SCHOOL   (United Kingdom)

Author keywords

Hepatitis of unknown etiology; Liver diseases; Next generation sequencing; Shotgun library

Indexed keywords

COMPLEMENTARY DNA;

ACUTE HEPATITIS; ACUTE HEPATITIS OF UNKNOWN ETIOLOGY; ADULT; AGED; ARTICLE; BLOOD DONOR; CLINICAL ARTICLE; CONTROLLED STUDY; FEMALE; GENE AMPLIFICATION; HEPATITIS B; HEPATITIS B VIRUS; HEPATITIS E; HEPATITIS E VIRUS; HUMAN; MALE; MIDDLE AGED; MOLECULAR LIBRARY; NEXT GENERATION SEQUENCING; NONHUMAN; PRIORITY JOURNAL; VIRUS DETECTION; YOUNG ADULT; BLOOD; DIAGNOSTIC TEST; DNA SEQUENCE; GENETICS; HEPATITIS, VIRAL, HUMAN; ISOLATION AND PURIFICATION; MIXED INFECTION; PROCEDURES; SENSITIVITY AND SPECIFICITY; UNITED KINGDOM; UNITED STATES; VIET NAM; VIROLOGY;

ADULT; AGED; BLOOD; COINFECTION; DIAGNOSTIC TESTS, ROUTINE; FEMALE; GREAT BRITAIN; HEPATITIS B VIRUS; HEPATITIS E VIRUS; HEPATITIS, VIRAL, HUMAN; HUMANS; MALE; MIDDLE AGED; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA; UNITED STATES; VIETNAM; YOUNG ADULT;

EID: 84959386477     PISSN: 00221899     EISSN: 15376613     Source Type: Journal    
DOI: 10.1093/infdis/jiv315     Document Type: Article

References (41)

1. Tassopoulos N, Papatheodoridis G, Delladetsima I, Hatzakis A. Clinico-pathological features and natural history of acute sporadic non-(A-E) hepatitis. J Gastroenterol Hepatol 2008; 23:1208-15.
2. Yuge A, Kinoshita E, Moriuchi M, Ohno Y, Haga H, Moriuchi H. Persistent hepatitis associated with chronic active Epstein-Barr virus infection. Pediatr Infect Dis J 2004; 23:74-6.
3. Shibata Y, Kitajima N, Kawada J, et al. Association of cytomegalovirus with infantile hepatitis. Microbiol Immunol 2005; 49:771-7.
4. Karetnyi YV, Beck PR, Markin RS, Langnas AN, Naides SJ. Human par-vovirus B19 infection in acute fulminant liver failure. Arch Virol 1999; 144:1713-24.
5. Al-Hamoudi WK. Severe autoimmune hepatitis triggered by varicella zoster infection. World J Gastroenterol 2009; 15:1004-6.
6. Alter MJ, Gallagher M, Morris TT, et al. Acute non-A-E hepatitis in the United States and the role of hepatitis G virus infection. Sentinel Counties Viral Hepatitis Study Team. N Engl J Med 1997; 336:741-6.
7. Tassopoulos NC, Hatzakis A, Delladetsima I, Koutelou MG, Todoulos A, Miriagou V. Role of hepatitis C virus in acute non-A, non-B hepatitis in Greece: a 5-year prospective study. Gastroenterology 1992; 102:969-72.
8. Kobayashi M, Tanaka E, Kiyosawa K. [Non-A-E acute and chronic hepatitis in Japan]. Nihon Rinsho 1997; 55:530-4.
9. Parana R, Codes L, Andrade Z, et al. Clinical, histologic and serologic evaluation of patients with acute non-A-E hepatitis in north-eastern Brazil: is it an infectious disease? Int J Infect Dis 2003; 7:222-30.
10. Iushchuk ND, Tsyganova EV, Znoiko OO, et al. [Acute hepatitis of unspecified etiology: etiological structure and clinical-laboratory characteristics]. Eksp Klin Gastroenterol 2009:12-8.
11. Delic D, Mitrovic N, Spurnic AR, Svirtlih NS, Babic JS. Epidemiological characteristics and clinical manifestations of acute non-A-E hepatitis. Vojnosanit Pregl 2010; 67:903-9.
12. Simons JN, Leary TP, Dawson GJ, et al. Isolation of novel virus-like sequences associated with human hepatitis. Nat Med 1995; 1:564-9.
13. Linnen J, Wages J Jr, Zhang-Keck ZY, et al. Molecular cloning and disease association of hepatitis G virus: a transfusion-transmissible agent. Science 1996; 271:505-8.
14. Nishizawa T, Okamoto H, Konishi K, Yoshizawa H, Miyakawa Y, Mayumi M. A novel DNA virus (TTV) associated with elevated trans-aminase levels in posttransfusion hepatitis of unknown etiology. Biochem Biophys Res Commun 1997; 241:92-7.
15. Tanaka Y, Primi D, Wang RY, et al. Genomic and molecular evolutionary analysis of a newly identified infectious agent (SEN virus) and its relationship to the TT virus family. J Infect Dis 2001; 183:359-67.
16. Yeh CT, Tsao ML, Lin YC, Tseng IC. Identification of a novel single-stranded DNA fragment associated with human hepatitis. J Infect Dis 2006; 193:1089-97.
17. Satoh K, Iwata-Takakura A, Osada N, et al. Novel DNA sequence isolated from blood donors with high transaminase levels. Hepatol Res 2011; 41:971-81.
18. Cianciara J. [HGV, TTV and SEN viruses-are these organisms pathogenic?] Przegl Epidemiol 2002; 56(suppl 5):46-53.
19. Bowden S. New hepatitis viruses: contenders and pretenders. J Gastro-enterol Hepatol 2001; 16:124-31.
20. Zaghloul H, El-Sherbiny W. Detection of occult hepatitis C and hepatitis B virus infections from peripheral blood mononuclear cells. Immunol Invest 2010; 39:284-91.
21. van der Heijden M, de Vries M, van Steenbeek FG, et al. Sequence-independent VIDISCA-454 technique to discover new viruses in canine livers. J Virol Methods 2012; 185:152-5.
22. Kriesel JD, Hobbs MR, Jones BB, Milash B, Nagra RM, Fischer KF. Deep sequencing for the detection of virus-like sequences in the brains of patients with multiple sclerosis: detection of GBV-C in human brain. PLoS One 2012; 7:e31886.
23. Donaghy L, Barry FJ, Hunter JG, et al. Clinical and laboratory features and natural history of seronegative hepatitis in a nontransplant centre. Eur J Gastroenterol Hepatol 2013; 25:1159-64.
24. Stranneheim H, Kaller M, Allander T, Andersson B, Arvestad L, Lundeberg J. Classification of DNA sequences using Bloom filters. Bioinformatics 2010; 26:1595-600.
25. Li M, Vitányi PMB. An introduction to Kolmogorov complexity and its applications. Texts in computer science. New York: Springer, 2009.
26. van der Kuyl AC, Zorgdrager F, Hogema B, et al. High prevalence of hepatitis B virus dual infection with genotypes A and G in HIV-1 infected men in Amsterdam, the Netherlands, during 2000-2011. BMC Infect Dis 2013; 13:540.
27. Zoulim F, Seeger C. Reverse transcription in hepatitis B viruses is primed by a tyrosine residue of the polymerase. J Virol 1994; 68:6-13.
28. Stuyver L, De Gendt S, Van Geyt C, et al. A new genotype of hepatitis B virus: complete genome and phylogenetic relatedness. J Gen Virol 2000; 81:67-74.
29. Raimondo G, Allain JP, Brunetto MR, et al. Statements from the Taor-mina expert meeting on occult hepatitis B virus infection. J Hepatol 2008; 49:652-7.
30. Brechot C, Thiers V, Kremsdorf D, Nalpas B, Pol S, Paterlini-Brechot P. Persistent hepatitis B virus infection in subjects without hepatitis B surface antigen: clinically significant or purely "occult"? Hepatology 2001; 34:194-203.
31. Tanaka Y, Sanchez LV, Sugiyama M, et al. Characteristics of hepatitis B virus genotype G coinfected with genotype H in chimeric mice carrying human hepatocytes. Virology 2008; 376:408-15.
32. Sugiyama M, Tanaka Y, Sakamoto T, et al. Early dynamics of hepatitis B virus in chimeric mice carrying human hepatocytes monoinfected or coinfected with genotype G. Hepatology 2007; 45:929-37.
33. Sakamoto T, Tanaka Y, Watanabe T, et al. Mechanism of the dependence of hepatitis B virus genotype G on co-infection with other genotypes for viral replication. J Viral Hepat 2013; 20:e27-36.
34. Xu Z, Jensen G, Yen TS. Activation of hepatitis B virus S promoter by the viral large surface protein via induction of stress in the endoplasmic reticulum. J Virol 1997; 71:7387-92.
35. Sugiyama M, Tanaka Y, Kato T, et al. Influence of hepatitis B virus genotypes on the intra-and extracellular expression of viral DNA and antigens. Hepatology 2006; 44:915-24.
36. De Mitri M, Cassini R, Bernardi M. Hepatitis B virus-related hepatocar-cinogenesis: molecular oncogenic potential of clear or occult infections. Eur J Cancer 2010; 46:2178-86.
37. Osiowy C, Gordon D, Borlang J, Giles E, Villeneuve JP. Hepatitis B virus genotype G epidemiology and co-infection with genotype A in Canada. J Gen Virol 2008; 89:3009-15.
38. Purdy MA, Khudyakov YE. The molecular epidemiology of hepatitis E virus infection. Virus Res 2011; 161:31-9.
39. Kumar GT, Kazim SN, Kumar M, et al. Hepatitis B virus genotypes and hepatitis B surface antigen mutations in family contacts of hepatitis B virus infected patients with occult hepatitis B virus infection. J Gastroenterol Hepatol 2009; 24:588-98.
40. Hamid SS, Atiq M, Shehzad F, et al. Hepatitis E virus superinfection in patients with chronic liver disease. Hepatology 2002; 36:474-8.
41. Dalton HR, Hunter JG, Bendall R. Autochthonous hepatitis E in developed countries and HEV/HIV coinfection. Semin Liver Dis 2013; 33:50-61.