Meiosis in autopolyploid and allopolyploid Arabidopsis

Current Opinion in Plant Biology

Volumn 30, Issue , 2016, Pages 116-122

  Lloyd, Andrew ^a,b   Bomblies, Kirsten ^a,c  

^a HARVARD UNIVERSITY   (United States)

^b UNIVERSITÉ PARIS SACLAY   (France)

^c JOHN INNES CENTRE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; GENETICS; MEIOSIS; MOLECULAR EVOLUTION; PHYSIOLOGY; POLYPLOIDY;

ARABIDOPSIS; EVOLUTION, MOLECULAR; MEIOSIS; POLYPLOIDY;

EID: 84959299977     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pbi.2016.02.004     Document Type: Review

References (72)

1. Newton W.C.F., Darlington C.D. Meiosis in polyploids. J Genet 1929, 21:1-15.
2. Stebbins G.L. The significance of polyploidy in plant evolution. Am Nat 1940, 74:54-66.
3. McCollum G.D. Comparative studies of chromosome pairing in natural and induced Dactylis. Chromosoma 1958, 9:571-605.
4. Riley R. The diploidisation of polyploid wheat. Heredity 1960, 15:407-429.
5. Food and Agriculture Organization of the United Nations FAO Statistical Pocketbook 2015: World food and agriculture 2015.
6. Rasmussen S.W. Initiation of synapsis and interlocking of chromosomes during zygotene in Bombyx spermatocytes. Carlsberg Res Commun 1986, 51:401-432.
7. Rasmussen S.W. The transformation of the synaptonemal complex into the 'elimination chromatin' in Bombyx mori oocytes. Chromosoma 1977, 60:205-221.
8. Colas I., Shaw P., Prieto P., Wanous M., Spielmeyer W., Mago R., Moore G. Effective chromosome pairing requires chromatin remodeling at the onset of meiosis. Proc Natl Acad Sci U S A 2008, 105:6075-6080.
9. Mercier R., Mezard C., Jenczewski E., Macaisne N., Grelon M. The molecular biology of meiosis in plants. Annu Rev Plant Biol 2014, 66:1-31.
10. Higgins J.D., Wright K.M., Bomblies K., Franklin F.C.H. Cytological techniques to analyze meiosis in Arabidopsis arenosa for investigating adaptation to polyploidy. Front Plant Sci 2014, 4:1-7.
11. Pawlowski W.P. Chromosome organization and dynamics in plants. Curr Opin Plant Biol 2010, 13:640-645.
12. Hunter B., Bomblies K. Progress and promise in using Arabidopsis to study adaptation, divergence, and speciation. Arabidopsis Book 2010, 8:e0138.
13. Bomblies K., Madlung A. Polyploidy in the Arabidopsis genus. Chromosom Res 2014, 22:117-134.
14. Yoo M.-J., Liu X., Pires J.C., Soltis P.S., Soltis D.E. Nonadditive gene expression in polyploids. Annu Rev Genet 2014, 48:485-517.
15. Akama S., Shimizu-Inatsugi R., Shimizu K.K., Sese J. Genome-wide quantification of homeolog expression ratio revealed nonstochastic gene regulation in synthetic allopolyploid Arabidopsis. Nucleic Acids Res 2014, 42:e46.
16. Comai L. The advantages and disadvantages of being polyploid. Nat Rev Genet 2005, 6:836-846.
17. Clauss M.J., Koch M.A. Poorly known relatives of Arabidopsis thaliana. Trends Plant Sci 2006, 11:449-459.
18. Ramsey J., Schemske D.W. Neopolyploidy in flowering plants. Annu Rev Ecol Evol Syst 2002, 33:589-639.
19. Stift M., Berenos C., Kuperus P., Van Tienderen P.H. Segregation models for disomic, tetrasomic and intermediate inheritance in tetraploids: a general procedure applied to Rorippa (yellow cress) microsatellite data. Genetics 2008, 179:2113-2123.
20. Comai L., Tyagi A.P., Winter K., Holmes-Davis R., Reynolds S.H., Stevens Y., Byers B. Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids. Plant Cell 2000, 12:1551-1568.
21. Yant L., Hollister J.D., Wright K.M., Arnold B.J., Higgins J.D., Franklin F.C.H., Bomblies K. Meiotic adaptation to genome duplication in Arabidopsis arenosa. Curr Biol 2013, 23:2151-2156.
22. Henry I.M., Dilkes B.P., Tyagi A., Gao J., Christensen B., Comai L. The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of Arabidopsis. Plant Cell 2014, 26:181-194.
23. Schmickl R., Paule J., Klein J., Marhold K., Koch M.A. The evolutionary history of the Arabidopsis arenosa complex: diverse tetraploids mask the Western Carpathian center of species and genetic diversity. PLoS One 2012, 7:e42691.
24. Dart S., Kron P., Mable B.K. Characterizing polyploidy in Arabidopsis lyrata using chromosome counts and flow cytometry. Can J Bot 2004, 82:185-197.
25. O'Kane S.L., Schaal B.A., Al-shehbaz I.A. The origins of Arabidopsis suecica (Brassicaceae) as indicated by nuclear rDNA sequences. Syst Bot 1996, 21:559-566.
26. Shimizu-Inatsugi R., Lihová J., Iwanaga H., Kudoh H., Marhold K., Savolainen O., Watanabe K., Yakubov V.V., Shimizu K.K. The allopolyploid Arabidopsis kamchatica originated from multiple individuals of Arabidopsis lyrata and Arabidopsis halleri. Mol Ecol 2009, 18:4024-4048.
27. Nasrallah M.E., Yogeeswaran K., Snyder S., Nasrallah J.B. Arabidopsis species hybrids in the study of species differences and evolution of amphiploidy in plants. Plant Physiol 2000, 124:1605-1614.
28. Grandont L., Jenczewski E., Lloyd A.H. Meiosis and its deviations in polyploid plants. Cytogenet Genome Res 2013, 140:171-184.
29. Cifuentes M., Grandont L., Moore G., Chèvre A.M., Jenczewski E. Genetic regulation of meiosis in polyploid species: new insights into an old question. New Phytol 2010, 186:29-36.
30. Szadkowski E., Eber F., Huteau V., Lodé M., Huneau C., Belcram H., Coriton O., Manzanares-Dauleux M.J., Delourme R., King G.J., et al. The first meiosis of resynthesized Brassica napus, a genome blender. New Phytol 2010, 186:102-112.
31. Wu J.H., Datson P.M., Manako K.I., Murray B.G. Meiotic chromosome pairing behaviour of natural tetraploids and induced autotetraploids of Actinidia chinensis. Theor Appl Genet 2014, 127:549-557.
32. Kollmann F. Allium Ampeloprasum - A Polyploid Complex II. Meiosis and relationships between the ploidy types. Caryologia 1972, 25:295-312.
33. Carvalho A., Delgado M., Barão A., Frescatada M., Ribeiro E., Pikaard C., Viegas W., Neves N. Chromosome and DNA methylation dynamics during meiosis in the autotetraploid Arabidopsis arenosa. Sex Plant Reprod 2010, 23:29-37.
34. Jones G.H., Vincent J.E. Meiosis in autopolyploid Crepis capillaris. II. Autotetraploids. Genome 1994, 37:497-505.
35. Hollister J.D., Arnold B.J., Svedin E., Xue K.S., Dilkes B.P., Bomblies K., Hollister A.J.D. Genetic adaptation associated with genome-doubling in autotetraploid Arabidopsis arenosa. PLoS Genet 2012, 8:e1003093.
36. Arnold B., Kim S., Bomblies K. Single geographic origin of a widespread autotetraploid Arabidopsis arenosa lineage followed by interploidy admixture. Mol Biol Evol 2015, 32:1382-1395.
37. Wolf P.G., Soltis P.S., Soltis D.E. Tetrasomic inheritance and chromosome pairing behaviour in the naturally occurring autotetraploid Heuchera grossulariifolia (Saxifragaceae). Genome 1989, 32:655-659.
38. Jones G.H., Khazanehdari K.A., Ford-Lloyd B.V. Meiosis in the leek (Alium porrum L.) revisited. II. Metaphase I observations. Heredity 1996, 76:186-191.
39. Stack S.M., Roelofs D. Localized chiasmata and meiotic nodules in the tetraploid onion Allium porrum. Genome 1996, 39:770-783.
40. Jones G.H., Khazanehdari K.A. Meiosis in the leek (Alium porrum L.) revisited I. Prophase I Pairing. Chromosom Res 1995, 3:433-439.
41. Comai L., Tyagi A., Lysak M. FISH analysis of meiosis in Arabidopsis allopolyploids. Chromosom Res 2003, 11:217-226.
42. Lavania U.C. High bivalent frequencies in artificial autopolyploids of Hyoscyamus muticus L. Can. Can J Genet Cytol 1986, 28:7-11.
43. Lavania U.C. Polyploid Breeding: Meiosis in the diploid progenitor and its predictive vales for fertility in the autotetraploid. Proc Indian Natn Sci Acad 1991, B57:17-24.
44. Srivastava S., Lavania U., Sybenga J. Genetic variation in meiotic behaviour and fertility in tetraploid Hyoscyamus muticus: correlation with diploid meiosis. Heredity 1992, 68:231-239.
45. Pecinka A., Fang W., Rehmsmeier M., Levy A.a., Mittelsten Scheid O. Polyploidization increases meiotic recombination frequency in Arabidopsis. BMC Biol 2011, 9:24.
46. Santos J.L., Alfaro D., Armstrong S.J., Franklin F.C.H., Jones G.H. Partial diploidization of meiosis in autotetraploid Arabidopsis thaliana. Genetics 2003, 1540:1533-1540.
47. Weiss H., Maluszynska J. Chromosomal rearrangement in autotetraploid plants of Arabidopsis thaliana. Hereditas 2000, 133:255-261.
48. Zickler D., Kleckner N. Recombination, pairing, and synapsis of homologs during meiosis. Cold Spring Harb Perspect Biol 2015, 7:a016626.
49. Berchowitz L.E., Copenhaver G.P. Genetic interference: don't stand so close to me. Curr Genomics 2010, 11:91-102.
50. Khawaja H.I.T., Sybenga J., Ellis J.R. Chromosome pairing and chiasma formation in autopolyploids of different Lathyrus species. Genome 1997, 40:937-944.
51. Wentworth J., Gornall R. Cytogenetic evidence for autopolyploidy in Parnassia palustris. New Phytol 1996, 134:641-648.
52. Muramatsu M. Cytogenetics of decaploid Agropyron elongatum (Elytrigia elongata) (2n = 70). I. Frequency of decavalent formation. Genome 1990, 33:811-817.
53. Levan A. Meiosis of Allium porrum, a tetraploid species with chiasma localisation. Hereditas 1940, 26:454-462.
54. Gillies C.B. The effect of Ph gene alleles on synaptonemal complex formation in Triticum aestivum x T. kotschyi hybrids. Theor Appl Genet 1987, 74:430-438.
55. Koul K.K., Raina S.N. Male and female meiosis in diploid and colchitetraploid Phlox drurnmondii Hook. (Polemoniaceae). Bot J Linnean Soc 1996, 122:243-251.
56. Sears E.R. Genetic control of chromosome pairing in wheat. Annu Rev Genet 1976, 10:31-51.
57. Grandont L., Cuñado N., Coriton O., Huteau V., Eber F., Chèvre A.M., Grelon M., Chelysheva L., Jenczewski E. Homoeologous chromosome sorting and progression of meiotic recombination in Brassica napus: ploidy does matter!. Plant Cell 2014, 10.1105/tpc.114.122788.
58. Greer E., Martín A.C., Pendle A., Colas I., Jones A.M.E., Moore G., Shaw P. The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. Plant Cell 2012, 24:152-162.
59. Martín A.C., Shaw P., Phillips D., Reader S., Moore G. Licensing MLH1 sites for crossover during meiosis. Nat Commun 2014, 5:4580.
60. Doyle J.J., Flagel L.E., Paterson A.H., Rapp R.a., Soltis D.E., Soltis P.S., Wendel J.F. Evolutionary genetics of genome merger and doubling in plants. Annu Rev Genet 2008, 42:443-461.
61. Soltis P.S., Soltis D.E. The role of hybridization in plant speciation. Annu Rev Plant Biol 2009, 60:561-588.
62. Gaeta R.T., Chris Pires J. Homoeologous recombination in allopolyploids: the polyploid ratchet. New Phytol 2010, 186:18-28.
63. Gillies C.B. An electron microscopic study of synaptonemal complex formation at zygotene in rye. Chromosoma 1985, 92:165-175.
64. Loidl J., Ehrendorfer F., Schweizer D. EM analysis of meiotic chromosome-pairing in a pentaploid Achillea hybrid. Heredity 1990, 65:11-20.
65. Hobolth P. Chromosome pairing in allohexaploid wheat var. Chinese Spring. Transformation of multivalents into bivalents, a mechanism for exclusive bivalent formation. Carlsberg Res Commun 1981, 46:129-173.
66. Cuñado N., Garcia M.J., Callejas S., Fernandez A., Santos J.L. The pattern of zygotene and pachytene pairing in allotetraploid Aegilops species sharing the D genome. Theor Appl Genet 1996, 93:1175-1179.
67. Holm P.B. Chromosome pairing and chiasma formation in allohexaploid wheat, Triticum aestivum analyzed by spreading of meiotic nuclei. Carlsb Res Commun 1986, 51:239-294.
68. Xiong Z., Gaeta R.T., Pires J.C. Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus. Proc Natl Acad Sci U S A 2011, 108:7908-7913.
69. Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X., Wu J., et al. Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution. Nat Biotechnol 2015, 33:524-530.
70. Chalhoub B., Denoeud F., Liu S., Parkin I.a.P., Tang H., Wang X., Chiquet J., Belcram H., Tong C., Samans B., et al. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome. Science 2014, 345:950-953.
71. Jenczewski E., Eber F., Grimaud A., Huet S., Lucas M.O., Monod H., Chèvre A.M. PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids. Genetics 2003, 164:645-653.
72. Shimizu K.K., Fujii S., Marhold K., Watanabe K., Kudoh H. Arabidopsis kamchatica (Fisch. ex DC.) K. Shimizu & Kudoh and A. kamchatica subsp. kawasakiana (Makino) K. Shimizu & Kudoh, new combinations. Acta Phytotaxon Geobot 2005, 56:163-172.