Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of Xanthomonas translucens

BMC Genomics

Volumn 17, Issue 1, 2016, Pages

  Peng, Zhao ^a   Hu, Ying ^a   Xie, Jingzhong ^a   Potnis, Neha ^b   Akhunova, Alina ^a   Jones, Jeffrey ^b   Liu, Zhaohui ^c   White, Frank F ^a,b   Liu, Sanzhen ^a  

^a KANSAS STATE UNIVERSITY   (United States)

^b UNIVERSITY OF FLORIDA   (United States)

^c NORTH DAKOTA STATE UNIVERSITY   (United States)

Author keywords

Bacterial leaf streak; PacBio; TAL effectors; X. translucens

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN;

ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; BACTERIAL STRAIN; BARLEY; CLADISTICS; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENE MUTATION; GENE SILENCING; GENETIC VARIABILITY; HOST RANGE; MICROARRAY ANALYSIS; NONHUMAN; PATHOTYPE; PHYLOGENY; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TAL EFFECTOR GENE; TYPE III SECRETION SYSTEM; WHEAT; WILD TYPE; XANTHOMONAS; XANTHOMONAS TRANSLUCENS; GENETIC VARIATION; GENETICS; HIGH THROUGHPUT SEQUENCING; HORDEUM; MICROBIOLOGY; MULTIGENE FAMILY; PATHOGENICITY; PROCEDURES; TRANSCRIPTION INITIATION;

BACTERIAL PROTEINS; GENETIC VARIATION; GENOME, BACTERIAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HORDEUM; MULTIGENE FAMILY; PHYLOGENY; TRANSCRIPTIONAL ACTIVATION; TRITICUM; XANTHOMONAS;

EID: 84959178888     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-015-2348-9     Document Type: Article

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