-
1
-
-
84862861800
-
Small ponds with major impact: The relevance of ponds and lakes in permafrost landscapes to carbon dioxide emissions
-
Abnizova, A., Siemens, J., Langer, M., Boike, J.: Small ponds with major impact: The relevance of ponds and lakes in permafrost landscapes to carbon dioxide emissions, Global Biogeochem. Cy., 26, 1-9, doi:10.1029/2011GB004237, 2012.
-
(2012)
Global Biogeochem. Cy.
, vol.26
, pp. 1-9
-
-
Abnizova, A.1
Siemens, J.2
Langer, M.3
Boike, J.4
-
2
-
-
76349119916
-
Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities
-
Andersson, A. F., Riemann, L., Bertilsson, S.: Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities, ISME J., 4, 171-181, doi:10.1038/ismej.2009.108, 2009.
-
(2009)
ISME J.
, vol.4
, pp. 171-181
-
-
Andersson, A.F.1
Riemann, L.2
Bertilsson, S.3
-
3
-
-
84956764749
-
Disappearing Arctic tundra ponds: Fine-scale analysis of surface hydrology in drained thaw lake basins over a 65 year period (1948-2013)
-
Andresen, C. G., Lougheed, V. L.: Disappearing Arctic tundra ponds: Fine-scale analysis of surface hydrology in drained thaw lake basins over a 65 year period (1948-2013), J. Geophys. Res.-Biogeo., 120, doi:10.1002/2014JG002778, 2015.
-
(2015)
J. Geophys. Res.-Biogeo.
, vol.120
-
-
Andresen, C.G.1
Lougheed, V.L.2
-
4
-
-
83055184473
-
Using species co-occurrence networks to assess the impacts of climate change
-
Araújo, M. B., Rozenfeld, A., Rahbek, C., Marquet, P. A.: Using species co-occurrence networks to assess the impacts of climate change, Ecography, 34, 897-908, 2011.
-
(2011)
Ecography
, vol.34
, pp. 897-908
-
-
Araújo, M.B.1
Rozenfeld, A.2
Rahbek, C.3
Marquet, P.A.4
-
5
-
-
33646827806
-
Multivariate dispersion as a measure of beta diversity
-
Anderson, M. J., Ellingsen, K. E., McArdle, B. H.: Multivariate dispersion as a measure of beta diversity, Ecol. Lett., 9, 683-693, doi:10.1111/j.1461-0248.2006.00926.x, 2006.
-
(2006)
Ecol. Lett.
, vol.9
, pp. 683-693
-
-
Anderson, M.J.1
Ellingsen, K.E.2
McArdle, B.H.3
-
6
-
-
84855949949
-
Using network analysis to explore co-occurrence patterns in soil microbial communities
-
Barberan, A., Bates, S. T., Casamayor, E. O., Fierer, N.: Using network analysis to explore co-occurrence patterns in soil microbial communities, ISME J., 6, 343-351, doi:10.1038/ismej.2011.119, 2012.
-
(2012)
ISME J.
, vol.6
, pp. 343-351
-
-
Barberan, A.1
Bates, S.T.2
Casamayor, E.O.3
Fierer, N.4
-
7
-
-
85166916238
-
Gephi: An open source software for exploring and manipulating networks
-
Bastian, M., Heymann, S., Jacomy, M.: Gephi: an open source software for exploring and manipulating networks, ICWSM, 8, 361-362, 2009.
-
(2009)
ICWSM
, vol.8
, pp. 361-362
-
-
Bastian, M.1
Heymann, S.2
Jacomy, M.3
-
8
-
-
79958800578
-
Uncoupling of chitinase activity and uptake of hydrolysis products in freshwater bacterioplankton
-
Beier, S., Bertilsson, S.: Uncoupling of chitinase activity and uptake of hydrolysis products in freshwater bacterioplankton, Lim nol. Oceanogr., 56, 1179-1188, doi:10.4319/lo.2011.56.4.1179, 2011.
-
(2011)
Lim Nol. Oceanogr.
, vol.56
, pp. 1179-1188
-
-
Beier, S.1
Bertilsson, S.2
-
9
-
-
84884250415
-
Bacterial chitin degradationmechanisms and ecophysiological strategies
-
Beier, S., Bertilsson, S.: Bacterial chitin degradationmechanisms and ecophysiological strategies, Front. Microbiol., 4, 149, doi:10.3389/fmicb.2013.00149, 2013.
-
(2013)
Front. Microbiol.
, vol.4
, pp. 149
-
-
Beier, S.1
Bertilsson, S.2
-
10
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., Hochberg, Y.: Controlling the false discovery rate: a practical and powerful approach to multiple testing, J. Roy. Stat. Soc. B, 57, 289-300, 1995.
-
(1995)
J. Roy. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
11
-
-
83155168231
-
Environmental change in the Great Whale River region Hudson Bay: Five decades of multidisciplinary research by Centre d'études nordiques (CEN)
-
Bhiry, N., Delwaide, A., Allard, M., Bégin, Y., Filion, L., Lavoie, M., Nozais, C., Payette, S., Pienitz, R., Saulnier-Talbot, É., Vincent, W. F.: Environmental change in the Great Whale River region, Hudson Bay: Five decades of multidisciplinary research by Centre d'études nordiques (CEN), Ecoscience, 18, 182-203, 2011.
-
(2011)
Ecoscience
, vol.18
, pp. 182-203
-
-
Bhiry, N.1
Delwaide, A.2
Allard, M.3
Bégin, Y.4
Filion, L.5
Lavoie, M.6
Nozais, C.7
Payette, S.8
Pienitz, R.9
Saulnier-Talbot, É.10
Vincent, W.F.11
-
12
-
-
29344444810
-
Benthic and planktonic algal communities in a high arctic lake: Pigment structure and contrasting responses to nutrient enrichment
-
Bonilla, S., Villeneuve, V., Vincent, W. F.: Benthic and planktonic algal communities in a high arctic lake: Pigment structure and contrasting responses to nutrient enrichment, J. Phycol., 41, 1120-1130, 2005.
-
(2005)
J. Phycol.
, vol.41
, pp. 1120-1130
-
-
Bonilla, S.1
Villeneuve, V.2
Vincent, W.F.3
-
13
-
-
84898034686
-
Subarctic thermokarst ponds: Investigating recent landscape evolution and sediment dynamics in thawed permafrost of northern Québec (Canada)
-
Bouchard, F., Francus, P., Pienitz, R., Laurion, I., Feyte, S.: Subarctic thermokarst ponds: Investigating recent landscape evolution and sediment dynamics in thawed permafrost of northern Québec (Canada), Arct. Antarct. Alp. Res., 46, 251-271, doi:10.1657/1938-4246-46.1.251, 2014.
-
(2014)
Arct. Antarct. Alp. Res.
, vol.46
, pp. 251-271
-
-
Bouchard, F.1
Francus, P.2
Pienitz, R.3
Laurion, I.4
Feyte, S.5
-
14
-
-
75249107844
-
PyNAST: A flexible tool for aligning sequences to a template alignment
-
Caporaso, J. G., Bittinger, K., Bushman, F. D., DeSantis, T. Z., Andersen, G. L., Knight, R.: PyNAST: a flexible tool for aligning sequences to a template alignment, Bioinformatics, 26, 266-267, doi:10.1093/bioinformatics/btp636, 2010a.
-
(2010)
Bioinformatics
, vol.26
, pp. 266-267
-
-
Caporaso, J.G.1
Bittinger, K.2
Bushman, F.D.3
DeSantis, T.Z.4
Andersen, G.L.5
Knight, R.6
-
15
-
-
77952243141
-
QIIME allows analysis of highthroughput community sequencing data
-
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Penã, A. G., Goodrich, J. K., Gordon, J. I., Huttley, G. A., Kelley, S. T., Knights, D. Koenig, J. E., Ley, R. E., Lozupone, C. A., McDonald, D., Muegge, B. D., Pirrung, M., Reeder, J., Sevinsky, J. R., Turnbaugh, P. J., Walters, W. A., Widmann, J., Yatsunenko, T., Zaneveld, J., Knight, R.: QIIME allows analysis of highthroughput community sequencing data, Nat. Methods, 7, 335-336, doi:10.1038/nmeth.f.303, 2010b.
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Penã, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
16
-
-
84899409844
-
Top-down controls on bacterial community structure: Microbial network analysis of bacteria, T4-like viruses and protists
-
Chow, C.-E. T., Kim, D. Y., Sachdeva, R., Caron, D. A., Fuhrman, J. A.: Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists, ISME J., 8, 816-829, doi:10.1038/ismej.2013.199, 2014.
-
(2014)
ISME J.
, vol.8
, pp. 816-829
-
-
Chow, C.-E.T.1
Kim, D.Y.2
Sachdeva, R.3
Caron, D.A.4
Fuhrman, J.A.5
-
17
-
-
80655128612
-
Arctic Ocean microbial community structure before and after the 2007 record sea ice minimum
-
Comeau, A. M., Li, W. K. W., Tremblay, J.-É., Carmack, E. C., Lovejoy, C.: Arctic Ocean microbial community structure before and after the 2007 record sea ice minimum, PLoS ONE, 6, e27492, doi:10.1371/journal.pone.0027492.s012, 2011.
-
(2011)
PLoS ONE
, vol.6
, pp. e27492
-
-
Comeau, A.M.1
Li, W.K.W.2
Tremblay, J.-É.3
Carmack, E.C.4
Lovejoy, C.5
-
18
-
-
84940100175
-
Microbial biogeography of permafrost thaw ponds across the changing northern landscape
-
Comte, J., Monier, A., Crevecoeur, S., Lovejoy, C., Vincent, W. F.: Microbial biogeography of permafrost thaw ponds across the changing northern landscape, Ecography, 38, doi:10.1111/ecog.01667, 2015.
-
(2015)
Ecography
, vol.38
-
-
Comte, J.1
Monier, A.2
Crevecoeur, S.3
Lovejoy, C.4
Vincent, W.F.5
-
19
-
-
84927521025
-
Bacterial community structure across environmental gradients in permafrost thaw ponds: Methanotroph-rich ecosystems
-
Crevecoeur, S., Vincent, W. F., Comte, J., Lovejoy, C.: Bacterial community structure across environmental gradients in permafrost thaw ponds: methanotroph-rich ecosystems, Front. Microbiol., 6, 192, doi:10.3389/fmicb.2015.00192, 2015.
-
(2015)
Front. Microbiol.
, vol.6
, pp. 192
-
-
Crevecoeur, S.1
Vincent, W.F.2
Comte, J.3
Lovejoy, C.4
-
20
-
-
43349094507
-
The igraph software package for complex network research
-
Csardi, G., Nepusz, T.: The igraph software package for complex network research, Inter J. Complex Sys., 1695, 1-9, 2006.
-
(2006)
Inter J. Complex Sys.
, vol.1695
, pp. 1-9
-
-
Csardi, G.1
Nepusz, T.2
-
21
-
-
72949118701
-
Associations between species and groups of sites: Indices and statistical inference
-
De Cáceres, M., Legendre, P.: Associations between species and groups of sites: indices and statistical inference, Ecology, 90, 3566-3574, 2009.
-
(2009)
Ecology
, vol.90
, pp. 3566-3574
-
-
De Cáceres, M.1
Legendre, P.2
-
22
-
-
78650025969
-
Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034)
-
del Rio, T. G., Abt, B., Spring, S., Lapidus, A., Nolan, M., Tice, H., Copeland, A., Cheng, J.-F., Chen, F., Bruce, D., Goodwin, L., Pitluck, S., Ivanova, N., Mavromatis, K., Mikhailova, N., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y.-J., Jeffries, C. D., Chain, P., Saunders, E., Detter, J. C., Brettin, T., Rohde, M., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H.-P., Lucas, S.: Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034), Stand. Genomic Sci., 2, 87-95, doi:10.4056/sigs.661199, 2010.
-
(2010)
Stand. Genomic Sci.
, vol.2
, pp. 87-95
-
-
Del Rio, T.G.1
Abt, B.2
Spring, S.3
Lapidus, A.4
Nolan, M.5
Tice, H.6
Copeland, A.7
Cheng, J.-F.8
Chen, F.9
Bruce, D.10
Goodwin, L.11
Pitluck, S.12
Ivanova, N.13
Mavromatis, K.14
Mikhailova, N.15
Pati, A.16
Chen, A.17
Palaniappan, K.18
Land, M.19
Hauser, L.20
Chang, Y.-J.21
Jeffries, C.D.22
Chain, P.23
Saunders, E.24
Detter, J.C.25
Brettin, T.26
Rohde, M.27
Göker, M.28
Bristow, J.29
Eisen, J.A.30
Markowitz, V.31
Hugenholtz, P.32
Kyrpides, N.C.33
Klenk, H.-P.34
Lucas, S.35
more..
-
23
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis, T. Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E. L., Keller, K., Huber, T., Dalevi, D., Hu, P., Andersen, G. L.: Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB, Appl. Environ. Microb., 72, 5069-5072, doi:10.1128/AEM.03006-05, 2006.
-
(2006)
Appl. Environ. Microb.
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
24
-
-
84949582468
-
Oxygen dynamics in permafrost thaw lakes: Anaerobic bioreactors in the Canadian subarctic
-
Deshpande, B., MacIntyre, S., Matveev, A., Vincent, W. F.: Oxygen dynamics in permafrost thaw lakes: Anaerobic bioreactors in the Canadian subarctic, Limnol. Oceanogr., 60, 1656-1670, doi:10.1002/lno.10126, 2015.
-
(2015)
Limnol. Oceanogr.
, vol.60
, pp. 1656-1670
-
-
Deshpande, B.1
MacIntyre, S.2
Matveev, A.3
Vincent, W.F.4
-
25
-
-
54549095048
-
Microbial services: Challenges for microbial ecologists in a changing world
-
Ducklow, H.: Microbial services: challenges for microbial ecologists in a changing world, Aquat. Microb. Ecol., 53, 13-19, doi:10.3354/ame01220, 2008.
-
(2008)
Aquat. Microb. Ecol.
, vol.53
, pp. 13-19
-
-
Ducklow, H.1
-
26
-
-
84884904719
-
UPARSE: Highly accurate OTU sequences from microbial amplicon reads
-
Edgar, R. C.: UPARSE: highly accurate OTU sequences from microbial amplicon reads, Nat. Methods, 10, 996-998, doi:10.1038/nmeth.2604, 2013.
-
(2013)
Nat. Methods
, vol.10
, pp. 996-998
-
-
Edgar, R.C.1
-
27
-
-
84855951093
-
Coherent dynamics and association networks among lake bacterioplankton taxa
-
Eiler, A., Heinrich, F., Bertilsson, S.: Coherent dynamics and association networks among lake bacterioplankton taxa, ISME J., 6, 330-342, doi:10.1038/ismej.2011.113, 2011.
-
(2011)
ISME J.
, vol.6
, pp. 330-342
-
-
Eiler, A.1
Heinrich, F.2
Bertilsson, S.3
-
28
-
-
77951558486
-
Annual variations in the diversity, viability, and origin of airborne bacteria
-
Fahlgren, C., Hagström, A., Nilsson, D., Zweifel, U. L.: Annual variations in the diversity, viability, and origin of airborne bacteria, Appl. Environ. Microb., 76, 3015-3025, doi:10.1128/AEM.02092-09, 2010.
-
(2010)
Appl. Environ. Microb.
, vol.76
, pp. 3015-3025
-
-
Fahlgren, C.1
Hagström, A.2
Nilsson, D.3
Zweifel, U.L.4
-
29
-
-
0026499429
-
Conservation evaluation and phylogenetic diversity
-
Faith, D. P.: Conservation evaluation and phylogenetic diversity, Biol. Conserv., 61, 1-10, 1992.
-
(1992)
Biol. Conserv.
, vol.61
, pp. 1-10
-
-
Faith, D.P.1
-
30
-
-
84880920645
-
Bacterial community structure on two alpine debriscovered glaciers and biogeography of Polaromonas phylotypes
-
Franzetti, A., Tatangelo, V., Gandolfi, I., Bertolini, V., Bestetti, G., Diolaiuti, G., D'Agata, C., Mihalcea, C., Smiraglia, C., Ambrosini, R.: Bacterial community structure on two alpine debriscovered glaciers and biogeography of Polaromonas phylotypes, ISME J., 7, 1483-1492, doi:10.1038/ismej.2013.48, 2013.
-
(2013)
ISME J.
, vol.7
, pp. 1483-1492
-
-
Franzetti, A.1
Tatangelo, V.2
Gandolfi, I.3
Bertolini, V.4
Bestetti, G.5
Diolaiuti, G.6
D'Agata, C.7
Mihalcea, C.8
Smiraglia, C.9
Ambrosini, R.10
-
31
-
-
79955655606
-
The impact of different soil parameters on the community structure of dominant bacteria from nine different soils located on Livingston Island, South Shetland Archipelago, Antarctica
-
Ganzert, L., Lipski, A., Hubberten, H.-W., Wagner, D.: The impact of different soil parameters on the community structure of dominant bacteria from nine different soils located on Livingston Island, South Shetland Archipelago, Antarctica, FEMS Microbiol. Ecol., 76, 476-491, doi:10.1111/j.1574-6941.2011.01068.x, 2011.
-
(2011)
FEMS Microbiol. Ecol.
, vol.76
, pp. 476-491
-
-
Ganzert, L.1
Lipski, A.2
Hubberten, H.-W.3
Wagner, D.4
-
32
-
-
84879203933
-
Thermokarst lakes drainage and drained basins
-
edited by: Shroder. J. F. Academic Press, San Diego
-
Grosse, G., Jones, B., Arp, C.: Thermokarst Lakes, Drainage, and Drained Basins, in: Treatise on Geomorphology, edited by: Shroder. J. F., Volume 8, Academic Press, San Diego, 325-353, 2013.
-
(2013)
Treatise on Geomorphology
, vol.8
, pp. 325-353
-
-
Grosse, G.1
Jones, B.2
Arp, C.3
-
33
-
-
84880044190
-
Does environmental heterogeneity affect species co-occurrence in ecological guilds across stream macroinvertebrate metacommunities?
-
Heino, J., Grönroos, M.: Does environmental heterogeneity affect species co-occurrence in ecological guilds across stream macroinvertebrate metacommunities?, Ecography, 36, 926-936, doi:10.1111/j.1600-0587.2012.00057.x, 2013.
-
(2013)
Ecography
, vol.36
, pp. 926-936
-
-
Heino, J.1
Grönroos, M.2
-
34
-
-
77951550586
-
Phylogenetic measures of biodiversity
-
Helmus, M. R., Bland, T. J., Williams, C. K., Ives, A. R.: Phylogenetic measures of biodiversity, Am. Nat., 169, E68-E83, doi:10.1086/511334, 2007.
-
(2007)
Am. Nat.
, vol.169
, pp. E68-E83
-
-
Helmus, M.R.1
Bland, T.J.2
Williams, C.K.3
Ives, A.R.4
-
35
-
-
58149109217
-
High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area
-
Hervàs, A., Casamayor, E. O.: High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area, FEMS Microbiol. Ecol., 67, 219-228, doi:10.1111/j.1574-6941.2008.00617.x, 2009.
-
(2009)
FEMS Microbiol. Ecol.
, vol.67
, pp. 219-228
-
-
Hervàs, A.1
Casamayor, E.O.2
-
36
-
-
34547626761
-
A comparison of taxon cooccurrence patterns for macro-and microorganisms
-
Horner-Devine, M. C., Silver, J. M., Leibold, M. A., Bohannan, B. J., Colwell, R. K., Fuhrman, J. A., Green, J. L., Kuske, C. R., Martiny, J. B., Muyzer, G.: A comparison of taxon cooccurrence patterns for macro-and microorganisms, Ecology, 88, 1345-1353, 2007.
-
(2007)
Ecology
, vol.88
, pp. 1345-1353
-
-
Horner-Devine, M.C.1
Silver, J.M.2
Leibold, M.A.3
Bohannan, B.J.4
Colwell, R.K.5
Fuhrman, J.A.6
Green, J.L.7
Kuske, C.R.8
Martiny, J.B.9
Muyzer, G.10
-
37
-
-
68849099915
-
Disentangling niche and neutral influences on community assembly: Assessing the performance of community phylogenetic structure tests
-
Kembel, S. W.: Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests, Ecol. Lett., 12, 949-960, doi:10.1111/j.1461-0248.2009.01354.x, 2009.
-
(2009)
Ecol. Lett.
, vol.12
, pp. 949-960
-
-
Kembel, S.W.1
-
38
-
-
77953882250
-
Picante: R tools for integrating phylogenies and ecology
-
Kembel, S. W., Cowan, P. D., Helmus, M. R., Cornwell, W. K., Morlon, H., Ackerly, D. D., Blomberg, S. P., Webb, C. O.: Picante: R tools for integrating phylogenies and ecology, Bioinformatics, 26, 1463-1464, doi:10.1093/bioinformatics/btq166, 2010.
-
(2010)
Bioinformatics
, vol.26
, pp. 1463-1464
-
-
Kembel, S.W.1
Cowan, P.D.2
Helmus, M.R.3
Cornwell, W.K.4
Morlon, H.5
Ackerly, D.D.6
Blomberg, S.P.7
Webb, C.O.8
-
39
-
-
33646557961
-
Influence of dissolved organic matter source on lake bacterioplankton structure and function-implications for seasonal dynamics of community composition
-
Kritzberg, E. S., Langenheder, S., Lindström, E. S.: Influence of dissolved organic matter source on lake bacterioplankton structure and function-implications for seasonal dynamics of community composition, FEMS Microbiol. Ecol., 56, 406-417, doi:10.1111/j.1574-6941.2006.00084.x, 2006.
-
(2006)
FEMS Microbiol. Ecol.
, vol.56
, pp. 406-417
-
-
Kritzberg, E.S.1
Langenheder, S.2
Lindström, E.S.3
-
40
-
-
75749112028
-
Variability in greenhouse gas emissions from permafrost thaw ponds
-
Laurion, I., Vincent, W. F., MacIntyre, S., Retamal, L., Dupont, C., Francus, P., Pienitz, R.: Variability in greenhouse gas emissions from permafrost thaw ponds, Limnol. Oceanogr., 55, 115-133, doi:10.4319/lo.2010.55.1.0115, 2010.
-
(2010)
Limnol. Oceanogr.
, vol.55
, pp. 115-133
-
-
Laurion, I.1
Vincent, W.F.2
MacIntyre, S.3
Retamal, L.4
Dupont, C.5
Francus, P.6
Pienitz, R.7
-
41
-
-
84880331727
-
Beta diversity as the variance of community data: Dissimilarity coefficients and partitioning
-
Legendre, P., De Cáceres, M.: Beta diversity as the variance of community data: dissimilarity coefficients and partitioning, Ecol. Lett., 16, 951-963, doi:10.1111/ele.12141, 2013.
-
(2013)
Ecol. Lett.
, vol.16
, pp. 951-963
-
-
Legendre, P.1
De Cáceres, M.2
-
42
-
-
84939818228
-
Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter
-
Logue, J. B., Stedmon, C. A., Kellerman, A. M., Nielsen, N. J., Andersson, A. F., Laudon, H., Lindström, E. S., Kritzberg, E. S.: Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter, ISME J., 1-13, doi:10.1038/ismej.2015.131, 2015.
-
(2015)
ISME J.
, pp. 1-13
-
-
Logue, J.B.1
Stedmon, C.A.2
Kellerman, A.M.3
Nielsen, N.J.4
Andersson, A.F.5
Laudon, H.6
Lindström, E.S.7
Kritzberg, E.S.8
-
43
-
-
84979643196
-
Curated reference database of SSU rRNA for northern marine and freshwater communities of Archaea Bacteria and microbial eukaryotes v. 1.0
-
Lovejoy, C., Comeau, A., Thaler M.: Curated reference database of SSU rRNA for northern marine and freshwater communities of Archaea, Bacteria and microbial eukaryotes, v. 1.0, Nordicana, D23, doi:10.5885/45409XD-79A199B76BCC4110, 2015.
-
(2015)
Nordicana
, pp. D23
-
-
Lovejoy, C.1
Comeau, A.2
Thaler, M.3
-
44
-
-
29144464937
-
UniFrac: A new phylogenetic method for comparing microbial communities
-
Lozupone, C., Knight, R.: UniFrac: a new phylogenetic method for comparing microbial communities, Appl. Environ. Microb., 71, 8228-8235, doi:10.1128/AEM.71.12.8228-8235.2005, 2005.
-
(2005)
Appl. Environ. Microb.
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
45
-
-
77955960939
-
Opposing effects of competitive exclusion on the phylogenetic structure of communities
-
Mayfield, M. M., Levine, J. M.: Opposing effects of competitive exclusion on the phylogenetic structure of communities, Ecol. Lett., 13, 1085-1093, doi:10.1111/j.1461-0248.2010.01509.x, 2010.
-
(2010)
Ecol. Lett.
, vol.13
, pp. 1085-1093
-
-
Mayfield, M.M.1
Levine, J.M.2
-
46
-
-
70350241645
-
Sensitivity of the carbon cycle in the Arctic to climate change
-
McGuire, A. D., Anderson, L. G., Christensen, T. R., Dallimore, S., Guo, L., Hayes, D. J., Heimann, M., Lorenson, T. D., Macdonald, R. W., Roulet, N.: Sensitivity of the carbon cycle in the Arctic to climate change, Ecol. Monogr., 79, 523-555, doi:10.1890/08-2025.1, 2009.
-
(2009)
Ecol. Monogr.
, vol.79
, pp. 523-555
-
-
McGuire, A.D.1
Anderson, L.G.2
Christensen, T.R.3
Dallimore, S.4
Guo, L.5
Hayes, D.J.6
Heimann, M.7
Lorenson, T.D.8
Macdonald, R.W.9
Roulet, N.10
-
47
-
-
77951091023
-
A new graphical model for untangling complex relationships among environment, biodiversity, and ecosystem functioning
-
Miki, T.: A new graphical model for untangling complex relationships among environment, biodiversity, and ecosystem functioning, Ecol. Res., 24, 937-941, doi:10.1007/s11284-008-0552-7, 2008.
-
(2008)
Ecol. Res.
, vol.24
, pp. 937-941
-
-
Miki, T.1
-
48
-
-
1342268887
-
Randomization of presence-absence matrices: Comments and new algorithms
-
Miklós, I., Podani, J.: Randomization of presence-absence matrices: comments and new algorithms, Ecology, 85, 86-92, 2004.
-
(2004)
Ecology
, vol.85
, pp. 86-92
-
-
Miklós, I.1
Podani, J.2
-
49
-
-
84894042453
-
Discovery of a novel methanogen prevalent in thawing permafrost
-
Mondav, R., Woodcroft, B. J., Kim, E.-H., McCalley, C. K., Hodgkins, S. B., Crill, P. M., Chanton, J., Hurst, G. B., VerBerkmoes, N. C., Saleska, S. R., Hugenholtz, P., Rich, V. I., Tyson, G. W.: Discovery of a novel methanogen prevalent in thawing permafrost, Nat. Commun., 5, 1-7, doi:10.1038/ncomms4212, 2014.
-
(2014)
Nat. Commun.
, vol.5
, pp. 1-7
-
-
Mondav, R.1
Woodcroft, B.J.2
Kim, E.-H.3
McCalley, C.K.4
Hodgkins, S.B.5
Crill, P.M.6
Chanton, J.7
Hurst, G.B.8
VerBerkmoes, N.C.9
Saleska, S.R.10
Hugenholtz, P.11
Rich, V.I.12
Tyson, G.W.13
-
50
-
-
84925066318
-
Oceanographic structure drives the assembly processes of microbial eukaryotic communities
-
Monier, A., Comte, J., Babin, M., Forest, A., Matsuoka, A., Lovejoy, C.: Oceanographic structure drives the assembly processes of microbial eukaryotic communities, ISME J., 9, 990-1002, doi:10.1038/ismej.2014.197, 2015.
-
(2015)
ISME J.
, vol.9
, pp. 990-1002
-
-
Monier, A.1
Comte, J.2
Babin, M.3
Forest, A.4
Matsuoka, A.5
Lovejoy, C.6
-
51
-
-
33746327503
-
Ecological networks and their fragility
-
Montoya, J. M., Pimm, S. L., Solé, R. V.: Ecological networks and their fragility, Nature, 442, 259-264, doi:10.1038/nature04927, 2006.
-
(2006)
Nature
, vol.442
, pp. 259-264
-
-
Montoya, J.M.1
Pimm, S.L.2
Solé, R.V.3
-
52
-
-
84924662778
-
Resistant microbial co-occurrence patterns inferred by network topology
-
Peura, S., Bertilsson, S., Jones, R. I., Eiler, A.: Resistant microbial co-occurrence patterns inferred by network topology, Appl. Environ. Microb., 81, 2090-2097, doi:10.1128/AEM.03660-14, 2015.
-
(2015)
Appl. Environ. Microb.
, vol.81
, pp. 2090-2097
-
-
Peura, S.1
Bertilsson, S.2
Jones, R.I.3
Eiler, A.4
-
53
-
-
77949718257
-
FastTree 2-approximately maximum-likelihood trees for large alignments
-
Price, M. N., Dehal, P. S., Arkin, A. P.: FastTree 2-approximately maximum-likelihood trees for large alignments, PLoS ONE, 5, e9490, doi:10.1371/journal.pone.0009490, 2010.
-
(2010)
PLoS ONE
, vol.5
, pp. e9490
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
54
-
-
37549027613
-
SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse, E., Quast, C., Knittel, K., Fuchs, B. M., Ludwig, W., Peplies, J., Glöckner, F. O.: SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB, Nucl. Acids Res., 35, 7188-7196, doi:10.1093/nar/gkm864, 2007.
-
(2007)
Nucl. Acids Res.
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
Fuchs, B.M.4
Ludwig, W.5
Peplies, J.6
Glöckner, F.O.7
-
55
-
-
84863304598
-
-
R Core Team: edited by R Foundation for Statistical Computing, Vienna, Austria (May 2015)
-
R Core Team: R: A language and environment for statistical computing., edited by R Foundation for Statistical Computing, Vienna, Austria, http://www.R-project.org/(May 2015), 2014.
-
(2014)
R: A Language and Environment for Statistical Computing
-
-
-
56
-
-
83755163018
-
Detecting novel associations in large data sets
-
Reshef, D. N., Reshef, Y. A., Finucane, H. K., Grossman, S. R., McVean, G., Turnbaugh, P. J., Lander, E. S., Mitzenmacher, M., Sabeti, P. C.: Detecting novel associations in large data sets, Science, 334, 1518-1524, doi:10.1126/science.1205438, 2011.
-
(2011)
Science
, vol.334
, pp. 1518-1524
-
-
Reshef, D.N.1
Reshef, Y.A.2
Finucane, H.K.3
Grossman, S.R.4
McVean, G.5
Turnbaugh, P.J.6
Lander, E.S.7
Mitzenmacher, M.8
Sabeti, P.C.9
-
57
-
-
84881129613
-
Distribution and identity of bacteria in subarctic permafrost thaw ponds
-
Rossi, P. G., Laurion, I., Lovejoy, C.: Distribution and identity of bacteria in subarctic permafrost thaw ponds, Aquat. Microb. Ecol., 69, 231-245, doi:10.3354/ame01634, 2013.
-
(2013)
Aquat. Microb. Ecol.
, vol.69
, pp. 231-245
-
-
Rossi, P.G.1
Laurion, I.2
Lovejoy, C.3
-
58
-
-
84946481595
-
The quality of organic matter shapes the functional biogeography of bacterioplankton across boreal freshwater ecosystems
-
Ruiz-González, C., Ninõ-Garciá, J. P., Lapierre, J.-F., Del Giorgio, P. A.: The quality of organic matter shapes the functional biogeography of bacterioplankton across boreal freshwater ecosystems, Global Ecol. Biogeogr., 24, 1487-1498., doi:10.1111/geb.12356, 2015.
-
(2015)
Global Ecol. Biogeogr.
, vol.24
, pp. 1487-1498
-
-
Ruiz-González, C.1
Ninõ-Garciá, J.P.2
Lapierre, J.-F.3
Del Giorgio, P.A.4
-
59
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., Lesniewski, R. A., Oakley, B. B., Parks, D. H., Robinson, C. J., Sahl, J. W., Stres, B., Thallinger, G. G., Van Horn, D. J., Weber, C. F.: Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities, Appl. Environ. Microb., 75, 7537-7541, doi:10.1128/AEM.01541-09, 2009.
-
(2009)
Appl. Environ. Microb.
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
Sahl, J.W.11
Stres, B.12
Thallinger, G.G.13
Van Horn, D.J.14
Weber, C.F.15
-
60
-
-
51549097236
-
Vulnerability of permafrost carbon to climate change: Implications for the global carbon cycle
-
Schuur, E. A., Bockheim, J., Canadell, J. G., Euskirchen, E., Field, C. B., Goryachkin, S. V., Hagemann, S., Kuhry, P., Lafleur, P. M., Lee, H.: Vulnerability of permafrost carbon to climate change: Implications for the global carbon cycle, BioScience, 58, 701-714, doi:10.1641/B580807, 2008.
-
(2008)
BioScience
, vol.58
, pp. 701-714
-
-
Schuur, E.A.1
Bockheim, J.2
Canadell, J.G.3
Euskirchen, E.4
Field, C.B.5
Goryachkin, S.V.6
Hagemann, S.7
Kuhry, P.8
Lafleur, P.M.9
Lee, H.10
-
61
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon, P., Markiel, A., Ozier, O., Baliga, N. S.,Wang, J. T., Ramage, D., Amin, N., Schwikowski, B., Ideker, T.: Cytoscape: a software environment for integrated models of biomolecular interaction networks, Genome Res., 13, 2498-2504, 2003.
-
(2003)
Genome Res.
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
62
-
-
0003818411
-
-
Special Publication
-
Stainton, M. P., Capel, M. J., Armstrong, F. A. J.: The Chemical Analysis of Fresh Water, Winnipeg, Canadian Fisheries and Marine Service, Special Publication 25, 1-168, 1977.
-
(1977)
The Chemical Analysis of Fresh Water, Winnipeg, Canadian Fisheries and Marine Service
, vol.25
, pp. 1-168
-
-
Stainton, M.P.1
Capel, M.J.2
Armstrong, F.A.J.3
-
63
-
-
80052061077
-
Marine bacterial, archaeal and protistan association networks reveal ecological linkages
-
Steele, J. A., Countway, P. D., Xia, L., Vigil, P. D., Beman, J. M., Kim, D. Y., Chow, C.-E. T., Sachdeva, R., Jones, A. C., Schwalbach, M. S., Rose, J. M., Hewson, I., Patel, A., Sun, F., Caron, D. A., Fuhrman, J. A.: Marine bacterial, archaeal and protistan association networks reveal ecological linkages, ISME J., 5, 1414-1425, doi:10.1038/ismej.2011.24, 2011.
-
(2011)
ISME J.
, vol.5
, pp. 1414-1425
-
-
Steele, J.A.1
Countway, P.D.2
Xia, L.3
Vigil, P.D.4
Beman, J.M.5
Kim, D.Y.6
Chow, C.-E.T.7
Sachdeva, R.8
Jones, A.C.9
Schwalbach, M.S.10
Rose, J.M.11
Hewson, I.12
Patel, A.13
Sun, F.14
Caron, D.A.15
Fuhrman, J.A.16
-
64
-
-
84865345637
-
Stochastic and deterministic assembly processes in subsurface microbial communities
-
Stegen, J. C., Lin, X., Konopka, A. E., Fredrickson, J. K.: Stochastic and deterministic assembly processes in subsurface microbial communities, ISME J., 6, 1653-1664, doi:10.1038/ismej.2012.22, 2012.
-
(2012)
ISME J.
, vol.6
, pp. 1653-1664
-
-
Stegen, J.C.1
Lin, X.2
Konopka, A.E.3
Fredrickson, J.K.4
-
65
-
-
0025622072
-
The checkerboard score and species distributions
-
Stone, L., Roberts, A.: The checkerboard score and species distributions, Oecologia, 85, 74-79, 1990.
-
(1990)
Oecologia
, vol.85
, pp. 74-79
-
-
Stone, L.1
Roberts, A.2
-
66
-
-
84871366074
-
Mechanisms determining the fate of dispersed bacterial communities in new environments
-
Székely, A. J., Berga, M., Langenheder, S.: Mechanisms determining the fate of dispersed bacterial communities in new environments, ISME J., 7, 61-71, doi:10.1038/ismej.2012.80, 2013.
-
(2013)
ISME J.
, vol.7
, pp. 61-71
-
-
Székely, A.J.1
Berga, M.2
Langenheder, S.3
-
67
-
-
70349556766
-
Soil organic carbon pools in the northern circumpolar permafrost region
-
Tarnocai, C., Canadell, J. G., Schuur, E. A. G., Kuhry, P., Mazhitova, G., Zimov, S.: Soil organic carbon pools in the northern circumpolar permafrost region, Global Biogeochem. Cy., 23, GB2023, doi:10.1029/2008GB003327, 2009.
-
(2009)
Global Biogeochem. Cy.
, vol.23
, pp. GB2023
-
-
Tarnocai, C.1
Canadell, J.G.2
Schuur, E.A.G.3
Kuhry, P.4
Mazhitova, G.5
Zimov, S.6
-
68
-
-
70849083255
-
Recent permafrost degradation in bogs of the James Bay area, northern Quebec, Canada
-
Thibault, S., Payette, S.: Recent permafrost degradation in bogs of the James Bay area, northern Quebec, Canada, Permafrost Periglac., 20, 383-389, 2009.
-
(2009)
Permafrost Periglac.
, vol.20
, pp. 383-389
-
-
Thibault, S.1
Payette, S.2
-
69
-
-
0000954448
-
Zur Vervollkommnung der quantitativen Phytoplankton-Metodik
-
Utermöhl, H.: Zur Vervollkommnung der quantitativen Phytoplankton-Metodik, Mitt. Int. Ver. Theor. Angew. Limnol. 9, 1-38, 1958.
-
(1958)
Mitt. Int. Ver. Theor. Angew. Limnol.
, vol.9
, pp. 1-38
-
-
Utermöhl, H.1
-
70
-
-
34547267913
-
Methane bubbling from northern lakes: Present and future contributions to the global methane budget
-
Walter, K. M., Smith, L. C., Stuart Chapin, F.: Methane bubbling from northern lakes: present and future contributions to the global methane budget, Philos. T. R. Soc. A, 365, 1657-1676, doi:10.1126/science.1128908, 2007.
-
(2007)
Philos. T. R. Soc. A
, vol.365
, pp. 1657-1676
-
-
Walter, K.M.1
Smith, L.C.2
Stuart Chapin, F.3
-
71
-
-
69549124242
-
Methane production and bubble emissions from arctic lakes: Isotopic implications for source pathways and ages
-
Walter, K. M., Chanton, J. P., Chapin, F. S., Schuur, E., Zimov, S. A.: Methane production and bubble emissions from arctic lakes: Isotopic implications for source pathways and ages, J. Geophys. Res-Biogeo., 113, G00A08, doi:10.1029/2007JG000569, 2008.
-
(2008)
J. Geophys. Res-Biogeo.
, vol.113
, pp. G00A08
-
-
Walter, K.M.1
Chanton, J.P.2
Chapin, F.S.3
Schuur, E.4
Zimov, S.A.5
-
72
-
-
84904800308
-
A shift of thermokarst lakes from carbon sources to sinks during the Holocene epoch
-
Walter Anthony, K. M., Zimov, S. A., Grosse, G., Jones, M. C., Anthony, P. M., Chapin, F. S., Finlay, J. C., Mack, M. C., Davydov, S., Frenzel, P., Frolking, S.: A shift of thermokarst lakes from carbon sources to sinks during the Holocene epoch, Nature, 511, 452-456, doi:10.1038/nature13560, 2014.
-
(2014)
Nature
, vol.511
, pp. 452-456
-
-
Walter Anthony, K.M.1
Zimov, S.A.2
Grosse, G.3
Jones, M.C.4
Anthony, P.M.5
Chapin, F.S.6
Finlay, J.C.7
Mack, M.C.8
Davydov, S.9
Frenzel, P.10
Frolking, S.11
-
73
-
-
0036909621
-
Phylogenies and community ecology
-
Webb, C. O., Ackerly, D. D., McPeek, M. A., Donoghue, M. J.: Phylogenies and community ecology, Annu. Rev. Ecol. Syst., 33, 475-505, doi:10.1146/annurev.ecolsys.33.010802.150448, 2002.
-
(2002)
Annu. Rev. Ecol. Syst.
, vol.33
, pp. 475-505
-
-
Webb, C.O.1
Ackerly, D.D.2
McPeek, M.A.3
Donoghue, M.J.4
-
74
-
-
0142059134
-
Evaluation of specific ultraviolet absorbance as an indicator of the chemical composition and reactivity of dissolved organic carbon
-
Weishaar, J. L., Aiken, G. R., Bergamaschi, B. A., Fram, M. S., Fujii, R., Mopper, K.: Evaluation of specific ultraviolet absorbance as an indicator of the chemical composition and reactivity of dissolved organic carbon, Environ. Sci. Technol., 37, 4702-4708, doi:10.1021/es030360x, 2003.
-
(2003)
Environ. Sci. Technol.
, vol.37
, pp. 4702-4708
-
-
Weishaar, J.L.1
Aiken, G.R.2
Bergamaschi, B.A.3
Fram, M.S.4
Fujii, R.5
Mopper, K.6
|