-
1
-
-
0015505849
-
Discontinuity of 26 S rRNA in Acanthamoeba castellani
-
Stevens, A. R. & Pachler, P. F. Discontinuity of 26 S rRNA in Acanthamoeba castellani. J. Mol. Biol. 66, 225-237 (1972).
-
(1972)
J. Mol. Biol.
, vol.66
, pp. 225-237
-
-
Stevens, A.R.1
Pachler, P.F.2
-
2
-
-
0016853624
-
Demonstration of intact 26 S ribosomal RNA molecules in Drosophila cells
-
Jordan, B. R. Demonstration of intact 26 S ribosomal RNA molecules in Drosophila cells. J. Mol. Biol. 98, 277-280 (1975).
-
(1975)
J. Mol. Biol.
, vol.98
, pp. 277-280
-
-
Jordan, B.R.1
-
3
-
-
0032569971
-
Processing of precursor rRNA in Euglena gracilis: Identification of intermediates in the pathway to a highly fragmented large subunit rRNA
-
Greenwood, S. J. & Gray, M. W. Processing of precursor rRNA in Euglena gracilis: identification of intermediates in the pathway to a highly fragmented large subunit rRNA. Biochim. Biophys. Acta 1443, 128-138 (1998).
-
(1998)
Biochim. Biophys. Acta
, vol.1443
, pp. 128-138
-
-
Greenwood, S.J.1
Gray, M.W.2
-
4
-
-
0019499473
-
Unusual pattern of ribonucleic acid components in the ribosome of Crithidia fasciculata, a trypanosomatid protozoan
-
Gray, M. W. Unusual pattern of ribonucleic acid components in the ribosome of Crithidia fasciculata, a trypanosomatid protozoan. Mol. Cell. Biol. 1, 347-357 (1981).
-
(1981)
Mol. Cell. Biol.
, vol.1
, pp. 347-357
-
-
Gray, M.W.1
-
5
-
-
0023045658
-
Three small RNAs within the 10 kb trypanosome rRNA transcription unit are analogous to Domain VII of other eukaryotic 28S rRNAs
-
White, T. C., Rudenko, G. & Borst, P. Three small RNAs within the 10 kb trypanosome rRNA transcription unit are analogous to Domain VII of other eukaryotic 28S rRNAs. Nucleic Acids Res. 14, 9471-9489 (1986).
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 9471-9489
-
-
White, T.C.1
Rudenko, G.2
Borst, P.3
-
6
-
-
84874191297
-
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
-
Hashem, Y. et al. High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome. Nature 494, 385-9 (2013).
-
(2013)
Nature
, vol.494
, pp. 385-389
-
-
Hashem, Y.1
-
7
-
-
35348850287
-
Two trypanosome-specific proteins are essential factors for 5S rRNA abundance and ribosomal assembly in Trypanosoma brucei
-
Hellman, K. M. et al. Two trypanosome-specific proteins are essential factors for 5S rRNA abundance and ribosomal assembly in Trypanosoma brucei. Eukaryot. Cell 6, 1766-72 (2007).
-
(2007)
Eukaryot. Cell
, vol.6
, pp. 1766-1772
-
-
Hellman, K.M.1
-
8
-
-
84876860902
-
Post-transcriptional regulation of the trypanosome heat shock response by a zinc finger protein
-
Droll, D. et al. Post-transcriptional regulation of the trypanosome heat shock response by a zinc finger protein. PLoS Pathog. 9, e1003286 (2013).
-
(2013)
PLoS Pathog.
, vol.9
-
-
Droll, D.1
-
9
-
-
13744261499
-
Species specificity in ribosome biogenesis: A nonconserved phosphoprotein is required for formation of the large ribosomal subunit in Trypanosoma brucei
-
Jensen, B. C., Brekken, D. L., Randall, A. C., Kifer, C. T. & Parsons, M. Species specificity in ribosome biogenesis: a nonconserved phosphoprotein is required for formation of the large ribosomal subunit in Trypanosoma brucei. Eukaryot. Cell 4, 30-5 (2005).
-
(2005)
Eukaryot. Cell
, vol.4
, pp. 30-35
-
-
Jensen, B.C.1
Brekken, D.L.2
Randall, A.C.3
Kifer, C.T.4
Parsons, M.5
-
10
-
-
0042858143
-
The NOG1 GTP-binding protein is required for biogenesis of the 60 S ribosomal subunit
-
Jensen, B. C., Wang, Q., Kifer, C. T. & Parsons, M. The NOG1 GTP-binding protein is required for biogenesis of the 60 S ribosomal subunit. J. Biol. Chem. 278, 32204-11 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 32204-32211
-
-
Jensen, B.C.1
Wang, Q.2
Kifer, C.T.3
Parsons, M.4
-
11
-
-
84884690849
-
Ribosome biogenesis requires a highly diverged XRN family 5′-3′ exoribonuclease for rRNA processing in Trypanosoma brucei
-
Sakyiama, J., Zimmer, S. L., Ciganda, M., Williams, N. & Read, L. K. Ribosome biogenesis requires a highly diverged XRN family 5′-3′ exoribonuclease for rRNA processing in Trypanosoma brucei. RNA 19, 1419-1431 (2013).
-
(2013)
RNA
, vol.19
, pp. 1419-1431
-
-
Sakyiama, J.1
Zimmer, S.L.2
Ciganda, M.3
Williams, N.4
Read, L.K.5
-
12
-
-
84901392580
-
Ribosome biogenesis in African trypanosomes requires conserved and trypanosomespecific factors
-
Umaer, K., Ciganda, M. & Williams, N. Ribosome biogenesis in African trypanosomes requires conserved and trypanosomespecific factors. Eukaryot. Cell 13, 727-737 (2014).
-
(2014)
Eukaryot. Cell
, vol.13
, pp. 727-737
-
-
Umaer, K.1
Ciganda, M.2
Williams, N.3
-
13
-
-
84887113964
-
Ribosome biogenesis in the yeast Saccharomyces cerevisiae
-
Woolford, J. L. & Baserga, S. J. Ribosome biogenesis in the yeast Saccharomyces cerevisiae. Genetics 195, 643-681 (2013).
-
(2013)
Genetics
, vol.195
, pp. 643-681
-
-
Woolford, J.L.1
Baserga, S.J.2
-
14
-
-
79959438183
-
Assembly of bacterial ribosomes
-
Shajani, Z., Sykes, M. & Williamson, J. Assembly of bacterial ribosomes. Annu. Rev. Biochem. 80, 501-526 (2011).
-
(2011)
Annu. Rev. Biochem.
, vol.80
, pp. 501-526
-
-
Shajani, Z.1
Sykes, M.2
Williamson, J.3
-
15
-
-
84908150999
-
Nucleolar stress with and without p53
-
James, A., Wang, Y., Raje, H., Rosby, R. & DiMario, P. Nucleolar stress with and without p53. Nucleus 5, 402-426 (2014).
-
(2014)
Nucleus
, vol.5
, pp. 402-426
-
-
James, A.1
Wang, Y.2
Raje, H.3
Rosby, R.4
DiMario, P.5
-
16
-
-
79956189938
-
A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop
-
Silva, S. D., Haider, S. J. & Phizicky, E. M. A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop. RNA 17, 1100-1110 (2011).
-
(2011)
RNA
, vol.17
, pp. 1100-1110
-
-
Silva, S.D.1
Haider, S.J.2
Phizicky, E.M.3
-
17
-
-
79956191573
-
Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae
-
Noma, A. et al. Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae. RNA 17, 1111-1119 (2011).
-
(2011)
RNA
, vol.17
, pp. 1111-1119
-
-
Noma, A.1
-
18
-
-
0025183708
-
Basic Local Alignment Search Tool
-
Altschup, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. Basic Local Alignment Search Tool. J. Mol. Biol. 215, 403-410 (1990).
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschup, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
19
-
-
84876536945
-
The T . brucei TRM5 methyltransferase plays an essential role in mitochondrial protein synthesis and function
-
Paris, Z. et al. The T . brucei TRM5 methyltransferase plays an essential role in mitochondrial protein synthesis and function. RNA 19, 649-658 (2013).
-
(2013)
RNA
, vol.19
, pp. 649-658
-
-
Paris, Z.1
-
20
-
-
84922020381
-
An integrated genomics approach identifies drivers of proliferation in luminal-subtype human breast cancer
-
Gatza, M. L., Silva, G. O., Parker, J. S., Fan, C. & Perou, C. M. An integrated genomics approach identifies drivers of proliferation in luminal-subtype human breast cancer. Nat. Genet. 46, 1051-1059 (2014).
-
(2014)
Nat. Genet.
, vol.46
, pp. 1051-1059
-
-
Gatza, M.L.1
Silva, G.O.2
Parker, J.S.3
Fan, C.4
Perou, C.M.5
-
21
-
-
0036860235
-
Targeting of a tetracycline-inducible expression system to the transcriptionally silent minichromosomes of Trypanosoma brucei
-
Wickstead, B., Ersfeld, K. & Gull, K. Targeting of a tetracycline-inducible expression system to the transcriptionally silent minichromosomes of Trypanosoma brucei. Mol. Biochem. Parasitol. 125, 211-216 (2002).
-
(2002)
Mol. Biochem. Parasitol.
, vol.125
, pp. 211-216
-
-
Wickstead, B.1
Ersfeld, K.2
Gull, K.3
-
22
-
-
2442436725
-
RNA interference in protozoan parasites
-
Ullu, E., Tschudi, C. & Chakraborty, T. RNA interference in protozoan parasites. Cell. Microbiol. 6, 509-19 (2004).
-
(2004)
Cell. Microbiol.
, vol.6
, pp. 509-519
-
-
Ullu, E.1
Tschudi, C.2
Chakraborty, T.3
-
23
-
-
80052344748
-
RNA interference in protozoan parasites: Achievements and challenges
-
Kolev, N. G., Tschudi, C. & Ullu, E. RNA interference in protozoan parasites: achievements and challenges. Eukaryot. Cell 10, 1156-63 (2011).
-
(2011)
Eukaryot. Cell
, vol.10
, pp. 1156-1163
-
-
Kolev, N.G.1
Tschudi, C.2
Ullu, E.3
-
24
-
-
45249105994
-
The structural mechanics of cell division in Trypanosoma brucei
-
Vaughan, S. & Gull, K. The structural mechanics of cell division in Trypanosoma brucei. Biochem. Soc. Trans. 36, 421-4 (2008).
-
(2008)
Biochem. Soc. Trans.
, vol.36
, pp. 421-424
-
-
Vaughan, S.1
Gull, K.2
-
25
-
-
0015880882
-
The dissociation of Escherichia coli ribosomes
-
Ball, L., Johnson, P. & Walker, I. The dissociation of Escherichia coli ribosomes. J. Biochem. 37, 12-20 (1973).
-
(1973)
J. Biochem.
, vol.37
, pp. 12-20
-
-
Ball, L.1
Johnson, P.2
Walker, I.3
-
26
-
-
80053321198
-
Complete modification maps for the cytosolic small and large subunit rRNAs of Euglena gracilis: Functional and evolutionary implications of contrasting patterns between the two rRNA components
-
Schnare, M. N. & Gray, M. W. Complete modification maps for the cytosolic small and large subunit rRNAs of Euglena gracilis: functional and evolutionary implications of contrasting patterns between the two rRNA components. J. Mol. Biol. 413, 66-83 (2011).
-
(2011)
J. Mol. Biol.
, vol.413
, pp. 66-83
-
-
Schnare, M.N.1
Gray, M.W.2
-
27
-
-
0019120909
-
Isolation and characterization of polysomes from Trypanosoma brucei
-
Cordingley, J. S. & Turner, M. J. Isolation and characterization of polysomes from Trypanosoma brucei. Parasitology 81, 537-51 (1980).
-
(1980)
Parasitology
, vol.81
, pp. 537-551
-
-
Cordingley, J.S.1
Turner, M.J.2
-
28
-
-
0037474205
-
A dispensable yeast ribosomal protein optimizes peptidyltransferase activity and affects translocation
-
Dresios, J., Panopoulos, P., Suzuki, K. & Synetos, D. A dispensable yeast ribosomal protein optimizes peptidyltransferase activity and affects translocation. J. Biol. Chem. 278, 3314-22 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 3314-3322
-
-
Dresios, J.1
Panopoulos, P.2
Suzuki, K.3
Synetos, D.4
-
29
-
-
36248998866
-
Human ribosomal protein L13a is dispensable for canonical ribosome function but indispensable for efficient rRNA methylation
-
Chaudhuri, S. et al. Human ribosomal protein L13a is dispensable for canonical ribosome function but indispensable for efficient rRNA methylation. RNA 13, 2224-2237 (2007).
-
(2007)
RNA
, vol.13
, pp. 2224-2237
-
-
Chaudhuri, S.1
-
30
-
-
40649110933
-
Elucidating the role of C/D snoRNA in rRNA processing and modification in Trypanosoma brucei
-
Barth, S. et al. Elucidating the role of C/D snoRNA in rRNA processing and modification in Trypanosoma brucei. Eukaryot. Cell 7, 86-101 (2008).
-
(2008)
Eukaryot. Cell
, vol.7
, pp. 86-101
-
-
Barth, S.1
-
31
-
-
84861913529
-
40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay
-
Fujii, K., Kitabatake, M., Sakata, T. & Ohno, M. 40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay. EMBO J. 31, 2579-89 (2012).
-
(2012)
EMBO J.
, vol.31
, pp. 2579-2589
-
-
Fujii, K.1
Kitabatake, M.2
Sakata, T.3
Ohno, M.4
-
32
-
-
0032905074
-
Molecular cloning and biochemical characterization of a VCP homolog in African trypanosomes
-
Roggy, J. L. & Bangs, J. D. Molecular cloning and biochemical characterization of a VCP homolog in African trypanosomes. Mol. Biochem. Parasitol. 98, 1-15 (1999).
-
(1999)
Mol. Biochem. Parasitol.
, vol.98
, pp. 1-15
-
-
Roggy, J.L.1
Bangs, J.D.2
-
33
-
-
0038521266
-
Biochemical Analysis of the 20 S Proteasome of Trypanosoma brucei
-
Wang, C. C. et al. Biochemical Analysis of the 20 S Proteasome of Trypanosoma brucei. J. Biol. Chem. 278, 15800-15808 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 15800-15808
-
-
Wang, C.C.1
-
34
-
-
84918590647
-
60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle
-
Leidig, C. et al. 60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle. Nat. Commun. 5, 3491 (2014).
-
(2014)
Nat. Commun.
, vol.5
, pp. 3491
-
-
Leidig, C.1
-
35
-
-
84875491600
-
Defining the RNA-protein interactions in the trypanosome preribosomal complex
-
Wang, L., Ciganda, M. & Williams, N. Defining the RNA-protein interactions in the trypanosome preribosomal complex. Eukaryot. Cell 12, 559-66 (2013).
-
(2013)
Eukaryot. Cell
, vol.12
, pp. 559-566
-
-
Wang, L.1
Ciganda, M.2
Williams, N.3
-
36
-
-
79952331212
-
The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Ψ1191 in yeast 18S rRNA
-
Meyer, B. et al. The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Ψ1191 in yeast 18S rRNA. Nucleic Acids Res. 39, 1526-37 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1526-1537
-
-
Meyer, B.1
-
37
-
-
77952314717
-
The ribosome assembly factor Nep1 responsible for Bowen-Conradi syndrome is a pseudouridine-N1-specific methyltransferase
-
Wurm, J. P. et al. The ribosome assembly factor Nep1 responsible for Bowen-Conradi syndrome is a pseudouridine-N1-specific methyltransferase. Nucleic Acids Res. 38, 2387-98 (2010).
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 2387-2398
-
-
Wurm, J.P.1
-
38
-
-
43249099857
-
Bud23 Methylates G1575 of 18S rRNA and Is Required for Efficient Nuclear Export of Pre-40S Subunits
-
White, J. et al. Bud23 Methylates G1575 of 18S rRNA and Is Required for Efficient Nuclear Export of Pre-40S Subunits. Mol. Cell. Biol. 28, 3151-3161 (2008).
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 3151-3161
-
-
White, J.1
-
39
-
-
84942135052
-
The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot
-
Sardana, R. et al. The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot. PLoS Biol. 13, e1002083 (2015).
-
(2015)
PLoS Biol.
, vol.13
-
-
Sardana, R.1
-
40
-
-
33845344703
-
Characterization of Protein Kinase CK2 from Trypanosoma brucei
-
Jensen, B. et al. Characterization of Protein Kinase CK2 from Trypanosoma brucei. Mol. Biochem. Parasitol. 151, 28-40 (2007).
-
(2007)
Mol. Biochem. Parasitol.
, vol.151
, pp. 28-40
-
-
Jensen, B.1
-
41
-
-
77954619982
-
The Fe/S cluster assembly protein Isd11 is essential for tRNA thiolation in Trypanosoma brucei
-
Paris, Z. et al. The Fe/S cluster assembly protein Isd11 is essential for tRNA thiolation in Trypanosoma brucei. J. Biol. Chem. 285, 22394-402 (2010).
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 22394-22402
-
-
Paris, Z.1
-
42
-
-
0023277545
-
Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate-Phenol-Chloroform Extraction
-
Chomczynski, P. & Sacchi, N. Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate-Phenol-Chloroform Extraction. Anal. Biochem. 162, 156-159 (1987).
-
(1987)
Anal. Biochem.
, vol.162
, pp. 156-159
-
-
Chomczynski, P.1
Sacchi, N.2
-
43
-
-
0020407633
-
Purification of nuclei from a flagellate protozoan, Trypanosoma brucei
-
Shapiro, S. Z. & Doxsey, S. J. Purification of nuclei from a flagellate protozoan, Trypanosoma brucei. Anal. Biochem. 127, 112-115 (1982).
-
(1982)
Anal. Biochem.
, vol.127
, pp. 112-115
-
-
Shapiro, S.Z.1
Doxsey, S.J.2
-
44
-
-
44949231424
-
Analyzing real-time PCR data by the comparative C(T) method
-
Schmittgen, T. D. & Livak, K. J. Analyzing real-time PCR data by the comparative C(T) method. Nat. Protoc. 3, 1101-1108 (2008).
-
(2008)
Nat. Protoc.
, vol.3
, pp. 1101-1108
-
-
Schmittgen, T.D.1
Livak, K.J.2
|