Genetic deviation in geographically close populations of the dengue vector Aedes aegypti (Diptera: Culicidae): influence of environmental barriers in South India

Parasitology Research

Volumn 115, Issue 3, 2016, Pages 1149-1160

  Vadivalagan, Chithravel ^a   Karthika, Pushparaj ^b   Murugan, Kadarkarai ^a   Panneerselvam, Chellasamy ^a   Paulpandi, Manickam ^a   Madhiyazhagan, Pari ^a   Wei, Hui ^c   Aziz, Al Thabiani ^d   Alsalhi, Mohamad Saleh ^e   Devanesan, Sandhanasamy ^e   Nicoletti, Marcello ^f   Paramasivan, Rajaiah ^g   Dinesh, Devakumar ^a   Benelli, Giovanni ^h  

^a BHARATHIAR UNIVERSITY   (India)

^b AVINASHILINGAM INSTITUTE FOR HOME SCIENCE AND HIGHER EDUCATION FOR WOMEN   (India)

^c INSTITUTE OF PLANT PROTECTION   (China)

^d UNIVERSITY OF TABUK   (Saudi Arabia)

^e KING SAUD UNIVERSITY   (Saudi Arabia)

^f SAPIENZA UNIVERSITY OF ROME   (Italy)

^g Centre for Research in Medical Entomology   (India)

^h UNIVERSITY OF PISA   (Italy)

Author keywords

Ancestral lineage; Arbovirus; CO1; DNA barcoding; Molecular ecology; Mosquito borne diseases; Phylogenetics; Purifying selection; Yellow fever

Indexed keywords

CYTOCHROME C OXIDASE; MITOCHONDRIAL DNA;

AEDES AEGYPTI; AFRICA; ARTICLE; BOTTLENECK POPULATION; DENGUE VIRUS; DNA POLYMORPHISM; ENVIRONMENTAL FACTOR; EVOLUTION; GENE MUTATION; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; INDIA; MOLECULAR ECOLOGY; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITE VECTOR; PRIORITY JOURNAL; SOUTHEAST ASIA; AEDES; ANIMAL; DENGUE; ENVIRONMENT; GENE FLOW; GENETIC VARIATION; GENETICS; GEOGRAPHY; HUMAN; INSECT VECTOR; PHYSIOLOGY; TRANSMISSION; VIROLOGY;

AEDES; AFRICA, WESTERN; ANIMALS; DENGUE; DENGUE VIRUS; DNA, MITOCHONDRIAL; ENVIRONMENT; GENE FLOW; GENETIC VARIATION; GEOGRAPHY; HAPLOTYPES; HUMANS; INDIA; INSECT VECTORS;

EID: 84958565852     PISSN: 09320113     EISSN: 14321955     Source Type: Journal    
DOI: 10.1007/s00436-015-4847-7     Document Type: Article

References (66)

1. Ashfaq M, Hebert PDN, Mirza JH, Khan AM, Zafar Y et al (2014) Analyzing mosquito (Diptera: Culicidae) diversity in Pakistan by DNA barcoding. PLoS ONE 9(5):e97268
2. Ashok Kumar V, Rajendran R, Manavalan R, Tewari SC, Arunachalam N, Ayanar K, Krishnamoorthi R, Tyagi BK (2010) Studies on community knowledge and behaviour following a dengue epidemic in Chennai city, Tamil Nadu, India. Trop Biomed 27:330–336
3. Benelli G (2015) Research in mosquito control: current challenges for a brighter future. Parasitol Res 114:2801–2805
4. Benelli G (2016) Plant-mediated biosynthesis of nanoparticles as an emerging tool against mosquitoes of medical and veterinary importance: a review. Parasitol Res. doi:10.1007/s00436-015-4800-9
5. Blouin MS, Yowell CA, Courtney CH, Dame JB (1998) Substitution bias, rapid saturation, and use of mtDNA for nematode systematics. Mol Biol Evol 15:1719–1727
6. Bracco JE, Capurro ML, Lourenço-de-Oliveira R, Sallum MA (2007) Genetic variability of Aedes aegypti in the Americas using a mitochondrial gene: evidence of multiple introductions. Mem Inst Oswaldo Cruz 102:573–580
7. Brown JE, Evans BR, Zheng W, Obas V, Barrera-Martinez L, Egizi A, Zhao H, Caccone A, Powell JR (2014) Human impacts have shaped historical and recent evolution in Aedes aegypti, the dengue and yellow fever mosquito. Evolution 68:514–525
8. Burns JM, Janzen DH, Hajibabaei M, Hallwachs W, Hebert PDN (2007) DNA barcodes and cryptic species of skipper butterflies in the genus Perichares in area de conservacion Guanacaste, Costa Rica. PNAS 105:6350–6355
9. Chandran R, Azeez PA (2015) Outbreak of dengue in Tamil Nadu, India. Curr Sci 109:171–176
10. Costa-Ribeiro MCV, Lourenço-de-Oliveira R, Failloux AB (2006) Geographic and temporal genetic patterns of Aedes aegypti populations in Rio de Janeiro, Brazil. Trop Med Int Health 11:1276–1285
11. Cywinska A, Hunter FF, Hebert PDN (2006) Identifying Canadian mosquito species through DNA barcodes. Med Vet Entomol 20:413–424
12. de la Herran R, Rejon C, Rejon M, Garrido-Ramos M (2001) The molecular phylogeny of the Sparidae (Pisces, perciformes) based on two satellite DNA families. Heredity 87:691–697
13. Deblauwe I, Demeulemeester J, De Witt J, Hendy A, Sohier C, Madder M (2015) Increased detection of Aedes albopictus in Belgium: no overwintering yet, but an intervention strategy is still lacking. Parasitol Res 114:3469–3477
14. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791
15. Gaffigan TV, Wilkerson RC, Pecor JE, Stoffer JA, Anderson T (2015) Systematic catalog of Culicidae. http://www.mosquitocatalog.org/
16. Galtier N, Nabholz B, Glemin S, Hurst GDD (2009) Mitochondrial DNA as a marker of molecular diversity: a reappraisal. Mol Ecol 18:4541–4550
17. Gorrochotegui-Escalante N, Gomez-Machorro C, Lozano-Fuentes S, Fernandez-Salas L, De Lourdes MM et al (2002) Breeding structure of Aedes aegypti populations in Mexico varies by region. Am J Trop Med Hyg 66:213–222
18. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
19. Hebert PDN, Cywinska A, Ball SL de Waard JR (2003) Biological identifications through DNA barcodes. Proc R Soc Lond B 270:313–322
20. Herrera F, Urdaneta L, Rivero J, Zoghbi N, Ruiz J, Carrasquel G, Martínez JA, Pernalete M, Villegas P, Montoya A, Rubio- Pais Y, Rojas E (2006) Population genetic structure of the dengue mosquito Aedes aegypti in Venezuela. Mem Inst Oswaldo Cruz 101:625–633
21. Huber K, Le Loan L, Hoang TH, Ravel S, Rodhain F, Failloux AB (2002) Genetic differentiation of the dengue vector, Aedes aegypti (Ho Chi Minh City, Vietnam) using microsatellite markers. Mol Ecol 11:1629–1635
22. Huber K, Schuldt K, Rudolf M, Marklewitz M, Fonseca DM, Kaufmann C, Tsuda Y, Junglen S, Krüger A, Becker N, Tannich E, Becker SC (2014) Distribution and genetic structure of Aedes japonicus japonicus populations (Diptera: Culicidae) in Germany. Parasitol Res 113:3201–3210
23. Jaimes-Dueñez J, Arboleda S, Triana- Chávez O, Gómez-Palacio A (2015) Spatio-temporal distribution of Aedes aegypti (Diptera: Culicidae) mitochondrial lineages in cities with distinct dengue incidence rates suggests complex population dynamics of the dengue vector in Colombia. PLoS Negl Trop Dis 9(4):e0003553
24. Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolism. Academic, New York, pp 21–132
25. Kang D, Sim C (2013) Identification of Culex complex species using SNP markers based on high-resolution melting analysis. Mol Ecol Resour 13:3692376
26. Kimura M (1987) Molecular evolutionary clock and the neutral theory. J Mol Evol 26:24–33
27. Krida G, Bouattour A, Rodhain F, Failloux AB (1998) Variability among Tunisian populations of Culex pipiens: genetic structure and susceptibility to a filarial parasite, Brugia pahangi. Parasitol Res 84:139–142
28. Krzywinski J, Besansky NJ (2003) Molecular systematics of Anopheles: from subgenera to subpopulations. Annu Rev Entomol 48:1112139
29. Kumar NP, Rajavel AR, Natarajan R, Jambulingam P (2007) DNA barcodes can distinguish species of Indian mosquitoes (Diptera:Culicidae). J Med Entomol 44:1–7
30. Librado P, Rozas J (2009) DnaSP v5: software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451–1452
31. Mehlhorn H, Al-Rasheid KA, Al-Quraishy S, Abdel-Ghaffar F (2012) Research and increase of expertise in arachno-entomology are urgently needed. Parasitol Res 110:259–265
32. Mousson L, Dauga C, Garrigues T, Schaffner F, Vazeille M, AB F-l (2005) Phylogeography of Aedes (Stegomyia) aegypti (L.) and Aedes (Stegomyia) albopictus (Skuse) (Diptera: Culicidae) based on mitochondrial DNA variations. Genet Res 86:1–11
33. Munstermann LE, Conn JE (1997) Systematics of mosquito disease vectors (Diptera: Culicidae): impact of molecular biology and cladistic analysis. Annu Rev Entomol 42:3512369
34. Murrell S, Wu SC, Butler M (2011) Review of dengue virus and the development of a vaccine. Biotechnol Adv 29:239–247
35. Murugan K, Dinesh D, Paulpandi M, Dakhellah Meqbel Althbyani A, Subramaniam J, Madhiyazhagan P, Wang L, Suresh U, Mahesh Kumar P, Mohan J, Rajaganesh R, Wei H, Kalimuthu K, Parajulee MN, Mehlhorn H, Benelli G (2015) Nanoparticles in the fight against mosquito-borne diseases: bioactivity of Bruguiera cylindrica-synthesized nanoparticles against dengue virus DEN-2 (in vitro) and its mosquito vector Aedes aegypti (Diptera: Culicidae). Parasitol Res 114:4349–4361
36. Murugan K, Aruna P, Panneerselvam C, Madhiyazhagan P, Paulpandi M, Subramaniam J, Rajaganesh R, Wei H, Saleh Alsalhi M, Devanesan S, Nicoletti M, Syuhei B, Canale A, Benelli G (2016a) Fighting arboviral diseases: low toxicity on mammalian cells, dengue growth inhibition (in vitro) and mosquitocidal activity of Centroceras clavulatum-synthesized silver nanoparticles. Parasitol Res. doi:10.1007/s00436-015-4783-6
37. Murugan K, Vadivalagan C, Karthika P, Panneerselvam C, Paulpandi M, Subramaniam J, Wei H, Al Thabiani A, Saleh Alsalhi M, Devanesan S, Nicoletti M, Paramasivan R, Parajulee MN, Benelli G (2016b) DNA barcoding and molecular evolution of mosquito vectors of medical and veterinary importance. Parasitol Res. doi:10.1007/s00436-015-4726-2
38. Navarro J-C, Quintero L, González AZR (2013) Molecular tracing with mitochondrial ND5 of the invasive mosquito Aedes (Stegomyia) albopictus (Skuse) in northern South America. J Entomol Zool Stud 1:32–38
39. Nei M, Gojobori T (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3:418–426
40. Paramasivan R, Thenmozhi V, Kabilan L, Tewari SC, Arunachalam N, Dhananjeyan KJ, Tyagi BK (2006) Seroepidemiology of a focal outbreak of dengue in Tamil Nadu. Indian J Med Res 124:718–720
41. Pfeiler E, Flores-Lopez CA, Mada-Velez JG, Escalante-Verdugo J, Markow TA (2013) Genetic diversity and population genetics of mosquitoes (Diptera: Culicidae: Culex spp.) from the Sonoran Desert of North America. Sci World J 2013: 724609
42. Polson KA, Brogdon WG, Rawlins SC, Chadee DD (2012) Impact of environmental temperatures on resistance to organophosphate insecticides in Aedes aegypti from Trinidad. Rev Panam Salud Publica 32:1–8
43. Remigio E, Hebert P (2003) Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships. Mol Phylogenet 29:641–647
44. Ruiz-Lopez F, Wilkerson RC, Conn JE, McKeon SN, Levin DM et al (2012) DNA barcoding reveals both known and novel taxa in the Albitarsis group (Anopheles: Nyssorhynchus) of neotropical malaria vectors. Parasit Vect 5:44
45. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
46. Scarpassa VM, Cardoza TB, Cardoso-Júnior RP (2008) Population genetics and phylogeography of Aedes aegypti (Diptera, Culicidae) from Brazil. Am J Trop Med Hyg 78:895–903
47. Sharma AK, Chandel K, Tyagi V, Mendki MJ, Tikar SN et al (2013) Molecular phylogeny and evolutionary relationship among four mosquito (Diptera: Culicidae) species from India using PCR-RFLP. J Mosq Res 3:58264
48. Sim S, Jupatanakul N, Ramirez JL, Kang S, Romero-Vivas CM et al (2013) Transcriptomic profiling of diverse Aedes aegypti strains reveals increased basal-level immune activation in dengue virus-refractory populations and identifies novel virus-vector molecular interactions. PLoS Negl Trop Dis 7:e2295
49. Sujitha V, Murugan K, Paulpandi M, Panneerselvam C, Suresh U, Roni M, Nicoletti M, Higuchi A, Madhiyazhagan P, Subramaniam J, Dinesh D, Vadivalagan C, Chandramohan B, Alarfaj AA, Munusamy MA, Barnard DR, Benelli G (2015) Green-synthesized silver nanoparticles as a novel control tool against dengue virus (DEN-2) and its primary vector Aedes aegypti. Parasitol Res 3315–3325
50. Surendran SN, Gajapathy K, Kumaran V, Tharmatha T, Jude PJ et al (2011) Molecular evidence for the presence of malaria vector species A of the Anopheles annularis complex in Sri Lanka. Parasit Vect 4:239
51. Suresh U, Murugan K, Benelli G, Nicoletti M, Barnard DR, Panneerselvam C, Mahesh Kumar P, Subramaniam J, Dinesh D, Chandramohan B (2015) Tackling the growing threat of dengue: Phyllanthus niruri-mediated synthesis of silver nanoparticles and their mosquitocidal properties against the dengue vector Aedes aegypti (Diptera: Culicidae). Parasitol Res 114:1551–1562
52. Tabachnick WJ, Powell JR (1978) Genetic structure of the East African domestic populations of Aedes aegypti. Nature 272:535–537
53. Tabachnick WJ, Powell JR (1979) A world-wide survey of genetic variation in the yellow fever mosquito, Aedes aegypti. Genet Res 34:215–229
54. Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585–595
55. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
56. Tautz D, Arctander P (2003) A plea for DNA taxonomy. Trends Ecol Evol 18:70–74
57. Thangaraham PS, Jeevan MK, Rajendran R, Samuel PP, Tyagi BK (2006) Dual infection by dengue virus and Plasmodium vivax in Alappuzha district, Kerala, India. Jpn J Infect Dis 59:211–212
58. Urdaneta L, Herrera F, Pernalete M, Zoghbi N, Rubio-Palis Y et al (2005) Detection of dengue viruses in field-caught Aedes aegypti (Diptera: Culicidae) in Maracay, Aragua state, Venezuela by type-specific polymerase chain reaction. Infect Genet Evol 5:177–184
59. Victor JT, Malathi M, Asokan R, Padmanaban P (2007) Laboratory-based dengue fever surveillance in Tamil Nadu, India. Indian J Med Res 126:112–115
60. Wang G, Li C, Guo X, Xing D, Dong Y et al (2012) Identifying the main mosquito species in China based on DNA barcoding. PLoS ONE 7:e47051
61. Werner D, Kampen H (2013) The further spread of Aedes japonicus japonicas (Diptera, Culicidae) towards northern Germany. Parasitol Res 112:3665–3668
62. WHO (2015) Dengue and severe dengue. Fact sheet N°117. World Health Organization, Geneva
63. Wilson JJ, Sevarkodiyone SP (2014) Breeding preference ratio of dengue and chikungunya vectors in certain rural villages of Virudhunagar district, Tamil Nadu, South India. World Appl Sci J 30:787–791
64. Xia X (2013) DAMBE5: a comprehensive software package for data analysis in molecular biology and evolution. Mol Biol Evol 30:1720–1728
65. Xia X, Lemey P (2009) Assessing substitution saturation with DAMBE. In: Lemey P, Salemi M, Vandamme AM (eds) The phylogenetic handbook: a practical approach to DNA and protein phylogeny, 2nd edn. Cambridge University Press, Cambridge, p 615–630
66. Xia X, Xie Z, Salemi M, Chen L, Wang Y (2003) An index of substitution saturation and its application. Mol Phylogenet Evol 26:1–7