The role of formate in combatting oxidative stress

Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology

Volumn 109, Issue 2, 2016, Pages 263-271

  Thomas, Sean C ^a   Alhasawi, Azhar ^a   Auger, Christopher ^a   Omri, Abdelwahab ^a   Appanna, Vasu D ^a  

^a LAURENTIAN UNIVERSITY   (Canada)

Author keywords

Formate dehydrogenase; Formate metabolism; Fumarate reductase formate dependent; Glyoxylate; Isocitrate lyase; Ketoacids; Pseudomonas fluorescens

Indexed keywords

FORMATE DEHYDROGENASE; FORMIC ACID; FUMARATE REDUCTASE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; SUCCINIC ACID; BACTERIAL PROTEIN; FORMIC ACID DERIVATIVE; HYDROGEN PEROXIDE; SUCCINATE DEHYDROGENASE;

ARTICLE; BACTERIAL CELL; BACTERIAL GROWTH; CELL FRACTIONATION; CELL STRESS; CONTROLLED STUDY; ENZYME MECHANISM; NONHUMAN; OXIDATIVE PHOSPHORYLATION; OXIDATIVE STRESS; PRIORITY JOURNAL; PROTEIN EXPRESSION; PSEUDOMONAS FLUORESCENS; SURVIVAL RATE; DRUG EFFECTS; ENZYMOLOGY; GENETICS; METABOLISM;

BACTERIAL PROTEINS; FORMATES; HYDROGEN PEROXIDE; OXIDATIVE STRESS; PSEUDOMONAS FLUORESCENS; SUCCINATE DEHYDROGENASE;

EID: 84957935933     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-015-0629-6     Document Type: Article

References (43)

1. Alekseeva AA, Savin SS, Tishkov VI (2011) NAD-dependent Formate dehydrogenase from plants. Acta Nat 3(4):38–54
2. Alhasawi A, Auger C, Appanna VP, Chahma MH, Appanna VD (2014) Zinc toxicity and ATP production in Pseudomonas fluorescens. J Appl Microbiol 117:65–73
3. Alhasawi A, Leblanc M, Appanna ND, Auger C, Appanna VD (2015a) Aspartate metabolism and pyruvate homeostasis triggered by oxidative stress in Pseudomonas fluorescens: a functional metabolomics study. Metabolomics. doi: 10.10007s11306-015-0841-4
4. Alhasawi A, Castonguay Z, Appanna ND, Auger C, Appanna VD (2015b) Glycine metabolism and anti-oxidative defence mechanisms in Pseudomonas fluorescens. Microbiol Res 171:26–31
5. Andreadeli A, Felmatakis E, Axarli I, Dimou M, Udvardi MK, Katinakis P, Labrou NE (2009) Cloning and characterization of Lotus japonicus formate dehydrogenase: a possible correlation with hypoxia. Biochim Biophys Acta 1794:976–984
6. Appanna VD, Preston CM (1987) Manganese elicits the synthesis of a novel exopolysaccharide in an arctic Rhizobium. FEBS Lett 215(1):79–82
7. Appanna VP, Auger C, Thomas SC, Omri A (2014) Fumarate metabolism and ATP production in Pseudomonas fluorescens exposed to nitrosative stress. Antonie Van Leeuwenhoek 106(3):431–438. doi:10.1007/s10482-014-0211-7
8. Auger C, Appanna ND, Alhasawi A, Appanna VD (2015) Deciphering metabolic networks by blue native polyacrylamide gel electrophoresis: a functional proteomic exploration. EuPa Open Proteom 7:64–72. doi:10.1016/j.euprot.2015.05.003
9. Bagramyan K, Trchounian A (2003) Structural and functional features of formate hydrogen lyase, an enzyme of mixed-acid fermentation from Escherichia coli. Biochemistry 68(11):1159–1170
10. Bagramyan K, Galstyan A, Trchounian A (2000) Redox potential is a determinant in the Escherichia coli anaerobic fermentative growth and survival effects of impermeable oxidant. Bioelectrochemistry 51(2):151–156
11. Beriault R, Chenier D, Singh R, Middaugh J, Mailloux R, Appanna VD (2005) Detection and purification of glucose 6-phosphate dehydrogenase, malic enzyme, and NADP-dependent isocitrate dehydrogenase by blue native polyacrylamide gel electrophoresis. Electrophoresis 26(15):2892–2897
12. Beriault R, Hamel R, Chenier D, Mailloux RJ, Joly H, Appanna VD (2007) The overexpression of NADPH-producing enzymes counters the oxidative stress evoked by gallium, an iron mimetic. Biometals 20(2):165–176
13. Bignucolo A, Appanna VP, Thomas SC, Auger C, Han S, Omri A et al (2013) Hydrogen peroxide stress provokes a metabolic reprogramming in Pseudomonas fluorescens enhanced production of pyruvate. J Biotechnol 167:309–315
14. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248–254
15. Brioukhanov AL, Netrousov AI, Eggen RIL (2006) The catalase and superoxide dismutase genes are transcriptionally up-regulated upon oxidative stress in the strictly anaerobic archaeon Methanosarcina barkeri. Microbiology 152:1671–1677. doi:10.1099/mic.0.28542-0
16. Chenier D, Beriault R, Mailloux R, Baguie M, Abramia G, Lemire J (2008) Involvement of fumarase C and NADH oxidase in metabolic adaptation of Pseudomonas fluorescens cells evoked by aluminum and gallium toxicity. Appl Environ Microbiol 74(13):3977–3984
17. Gul-Karaguler N, Sessions RB, Clarke AR, Holbrook JJ (2001) A single mutation in the NAD-specific formate dehydrogenase from Candida methylica allows the enzyme to use NADP. Biotechnol Lett 23:283–287
18. Hamel R, Appanna VD, Viswanatha T, Puiseux-Dao S (2004) Overexpression of isocitrate lyase is an important strategy in the survival of Pseudomonas fluorescens exposed to aluminum. Biochem Biophys Res Commun. 217:1189–1194
19. Hoelsch K, Suhrer I, Heusel M, Weister-Botz D (2013) Engineering of formate dehydrogenase: synergistic effect of mutations affecting cofactor specificity and chemical stability. Appl Microbiol Biotechnol 97(6):2473–2481. doi:10.1007/s00253-012-4142-9
20. Hourton-Cabassa C, Ambard-Bretteville F, Moreau F, Davy de Virville J, Remy R, Colas des Franc-Small C (1998) Stress induction of mitochondrial formate dehydrogenase in potato leaves. Plant Physiol 116(2):627–635
21. Jormakka M, Tornroth S, Byrne B, Iwata S (2002) Molecular basis of proton motive force generation: structure of formate dehydrogenase-N. Science 295(5561):1863–1868
22. Jormakka M, Byrne B, Iwata S (2003) Formate dehydrogenase—a versatile enzyme in changing environments. Curr Opin Struct Biol 13(4):418–423
23. Lemire J, Appanna VD (2011) Aluminum toxicity and astrocyte dysfunction: a metabolic link to neurological disorders. J Inorg Biochem 105(11):1513–1517
24. Leonharsberger S, Korsa I, Bock A (2002) The molecular biology of formate metabolism in Enterobacteria. J Mol Micorbiol Biotechnol 4(3):269–276
25. Li S, Liu H, Zhang Y, Yan Y, Li Y (2009) The protective effects of α-ketoacids against oxidative stress on rat spermatozoa in vitro. Asian J Androl 12(2):247–256. doi:10.1038/aja.2009.78
26. Mailloux RJ, Beriault R, Lemire J, Singh R, Che´nier DR et al (2007) The tricarboxylic acid cycle, an ancient metabolic network with a novel twist. PLoS One 2(8):e690. doi:10.1371/journal.pone.0000690
27. Mailloux RJ, Lemire J, Kalyuzhnyi S, Appanna VD (2008) A novel metabolic network leads to enhanced citrate biogenesis in Pseudomonas fluorescens exposed to aluminum toxicity. Extremophiles 12:451–459
28. Mailloux RJ, Puiseux-Dao S, Appanaa VD (2009) α-ketoglutarate abrogates the nuclear localization of HIF-1α in aluminum-exposed hepatocytes. Biochimie 91:408–415
29. Mailloux RJ, Lemire J, Appanna VD (2011) Metabolic networks to combat oxidative stress in Pseudomonas fluorescens. Anton Leeuwen J Microbiol 99(3):433–442
30. Schagger H, von Jagow G (1991) Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form. Anal Biochem 199(2):223–231
31. Shinagawa E, Toyama H, Matsushita K, Tuitemwong P, Theeragool G, Adachi O (2008) Formaldehyde elimination with formaldehyde and formate oxidase in membrane of acetic acid bacteria. J Biosci Bioeng 105(3):292–295
32. Singh R, Lemire J, Mailloux RJ, Appanna VD (2008) A novel strategy involved anti-oxidative defense: the conversion of NADH into NADPH by a metabolic network. PLoS One 3:2682
33. Stubbe J, Nocera DG, Yee CS, Chang MCY (2003) Radical initiation in the class I ribonucleotide reductase: long-range proton-coupled electron transfer? Chem Rev 103(6):2167–2202
34. Su C, Puls RW (2004) Nitrate reduction by zero valent iron: effects of formate, oxalate, citrate, chloride, sulfate, borate, and phosphate. Environ Sci Technol 38(9):2715–2720
35. Suzuki K, Itai R, Suzuki K, Nakanishi H, Nishizawa N, Yoshimura E, Mori S (1998) Formate dehydrogenase, an enzyme of anaerobic metabolism, is induced by iron deficiency in barley roots. Plant Physiol 116(2):725–732
36. Thomas SC, Alhasawi A, Appanna VP, Auger C, Appanna VD (2015) Brain metabolism and Alzheimer’s disease the prospect for a metabolite-based therapy. J Nutr Health Aging 19(1):58–63. doi:10.1007/s12603-014-0511-7
37. Uchimura H, Enjoji H, Seki T, Taguchi A, Tsakaya N, Shoun H (2002) Nitrate reductase-formate dehydrogenase couple involved in the fungal denitrification by Fusarium oxysporum. J Biochem 131(4):579–586
38. Yammamoto I, Saiki T, Liu SM, Ljungdahl LG (1983) Purification and properties of NADP-dependent formate dehydrogenase from Clostridium thermoaceticum a tungsten-selenium-iron protein. J Biol Chem 258(3):1826–1832
39. +/NADPH in cellular functions and cell death: regulation and biological consequences. Antioxid Redox Signal 10:179–206
40. 2+-dependent NADPH oxidase in chloroplasts. Plant Physiol 71:772–776
41. 2 during photosynthesis in Euglena gracilis Z. Agric Biol Chem 49:3309–3310
42. Yoshida A, Nishimura T, Kawaguchi H, Inui M, Yukawa H (2005) Enhanced hydrogen production from formic acid by formate hydrogen lyase-overexpressing Escherichia coli strains. Appl Environ Microbiol 71(11):6762–6768. doi:10.1128/AEM.71.11.6762-6768.2005
43. Zaunmuller T, Kelly DJ, Glockner FO, Unden G (2006) Succinate dehydrogenase functioning by a reverse redox loop mechanism and fumarate reductase in sulphate-reducing bacteria. Microbiology 152:2443–2453