Penicillium excelsum sp. Nov from the Brazil nut tree ecosystem in the Amazon basin'

PLoS ONE

Volumn 10, Issue 12, 2015, Pages

  Taniwaki, Marta Hiromi ^a   Pitt, John I ^b   Iamanaka, Beatriz T ^a   Massi, Fernanda P ^c   Fungaro, Maria Helena P ^c   Frisvad, Jens C ^d  

^a INSTITUTO DE TECNOLOGIA DE ALIMENTOS   (Brazil)

^b CSIRO   (Australia)

^c STATE UNIVERSITY OF LONDRINA   (Brazil)

^d TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

BETA TUBULIN; CALMODULIN; FUNGAL DNA;

ARTICLE; BERTOLLETIA EXCELSA; BRAZIL NUT; DNA EXTRACTION; ECOSYSTEM; FUNGUS IDENTIFICATION; FUNGUS ISOLATION; GENE AMPLIFICATION; GENE SEQUENCE; MORPHOLOGY; NONHUMAN; NUCLEOTIDE SEQUENCE; PENICILLIUM; PENICILLIUM EXCELSUM; PHYLOGENETIC TREE; POLLINATION; POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; TAXONOMY; BERTHOLLETIA; BRAZIL; CLASSIFICATION; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; PHYLOGENY;

BERTHOLLETIA; BRAZIL; DNA, FUNGAL; ECOSYSTEM; PENICILLIUM; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

EID: 84957091954     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0143189     Document Type: Article

References (31)

1. Geiser DM, Gueidan C, Miadlikowska J, Lutzoni F, Kauff F, Hofstetter V et al. (2006). Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae. Mycologia 2006;98:1053-1064. PMID: 17486980
2. Pitt JI, Hocking AD. Fungi and Food Spoilage. 3rd ed. New York: Springer, 2009.
3. Samson RA, Houbraken J, Thrane U, Frisvad JC, Andersen B. Food and Indoor Fungi, CBS laboratory manual series 2, CBS-Fungal Biodiversity Centre, Utrecht, Netherlands, 2010.
4. Houbraken J and Samson RA (2011) Phylogeny of Penicillium and the segregation of Trichocomaceae into three families. Stud Mycol. 2011;70:1-51. doi: 10.3114/sim.2011.70.01 PMID: 22308045
5. Visagie CM, Houbraken J, Frisvad JC, Hong S-B, Klaasen CHW, Perrone G et al. Identification and nomenclature of the genus Penicillium. Stud Mycol. 2014;78:343-371. doi: 10.1016/j.simyco.2014. 09.001 PMID: 25505353
6. Wadt LHO, Kainer KA, Gomes DAS. Population structure and nut yield of a Bertholletia excelsa stand in southwestern Amazonia. Forest Ecol Manag. 2005;211:371-384.
7. Freire FCO, Kozakiewicz Z, Paterson, RM. Mycoflora and mycotoxins in Brazilian black pepper, white pepper and Brazil nuts. Mycopathologia 2000;149:13-19. PMID: 11229375
8. Bayman P, Baker J, Mahoney N. Aspergillus on tree nuts. Mycopathologia 2002;155:161-169. PMID: 12617503
9. Olsen M, Johnsson P, Moller T, Paladino R, Lindblad M. Aspergillus nomius, an important aflatoxin producer in Brazil nuts? World Mycotox J. 2008;123-126.
10. Gonçalves JS, Ferracin LM, Vieira MLC, Iamanaka, BT, Taniwaki MH, Fungaro MHP. Molecular analysis of Aspergillus section Flavi isolated from Brazil nuts. World J Microbiol Biotechnol. 2012;28:1817-1825. PMID: 22805966
11. Calderari TO, Iamanaka BT, Frisvad JC, Pitt JI, Sartori D, Pereira JL et al. The biodiversity of Aspergillus section Flavi in brazil nuts: from rainforest to consumer. Int J Food Microbiol. 2013;160:267-272. doi: 10.1016/j.ijfoodmicro.2012.10.018 PMID: 23290234
12. Massi FP, Vieira MLC, Sartori D, Penha RES, Munhoz CF, Ferreira JM, et al. Brazil nuts are subject to infection with B and G aflatoxin-producing fungus, Aspergillus pseudonomius. Int J Food Microbiol. 2014;186:14-21 doi: 10.1016/j.ijfoodmicro.2014.06.006 PMID: 24974275
13. Taniwaki MH, Pitt JI, Iamanaka BT, Sartori D, Copetti MV, Balajee A et al. Aspergillus bertholletius sp. Nov. from brazil nuts. PLOSONE 2012;7:e42480.
14. Pitt JI. A Laboratory Guide to Common Penicillium Species. Commonwealth Scientific and Industrial Research Organization, North Ryde, NSW, 2000.
15. Frisvad JC, Samson RA. Polyphasic taxonomy of Penicillium subgenus Penicillium. A guide to identification of the food and air-borne terverticillate Penicillia and their mycotoxins. Stud Mycol. 2004;49:1-173.
16. Kornerup A, Wanscher JH. Methuen Handbook of Colour. Eyre Methuen, London, 1978.
17. Sambrook J, Russell DW. Molecular Cloning. A Laboratory Manual. Cold Spring Harbor Laboratory Press, NY, USA, 2001.
18. White TJ, Burns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds.) PCR Protocols: A guide to methods and applications, Academic Press, San Diego, pp 315-322, 1990.
19. Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous Ascomycetes. Appl Environ Microbiol. 1995;61:1323-1330. PMID: 7747954
20. Hong SB, Cho HS, Shin HD, Frisvad JC, Samson RA. Novel Neosartorya species isolated from soil in Korea. Int J Syst Evol Microbiol. 2006;56:477-486. PMID: 16449461
21. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731-2739. doi: 10.1093/molbev/msr121 PMID: 21546353
22. Tamura K, Nei M. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol. 1993;10:512-526. PMID: 8336541
23. Frisvad JC, Thrane U. Standardized high performance liquid chromatography of 182 mycotoxins and other fungal metabolites based on alkylphenone retention indices and UV-VIS spectra (diode array detection). J Chromatogr A 1987;404:195-214.
24. Houbraken J, López C, Frisvad JC, Boekhout T, Theelen B, Molano AEF. Et al. Five new Penicillium species, P. aracuaraense, P. elleniae, P. penarojaense, P. vanderhammenii and P. wotroi, from Colombian leaf litter. Int J Syst Evol Microbiol. 2011;61:1462-1475. PMID: 20639229
25. Pitt JI. The Genus Penicillium and its Teleomorphic States Eupenicillium and Talaromyces. Academic Press, London; 1980.
26. Frisvad JC, Filtenborg O. Revision of Penicillium subgenus Furcatum based on secondary metabolites and conventional characters. In: Samson, R. A. and Pitt, J. I. (eds.): Modern concepts in Penicillium and Aspergillus classification. Plenum Press, New York; 1990. pp. 159-170.
27. Mansouri S, Houbraken J, Samson RA, Frisvad JC, Christensen M, Tuthill DE, Koutaniemi S, Hatakka A, Lankinen P. Penicillium subrubescens, a new species efficiently producing inulinase. Antonie van Leeuwenhoek 2013;103:1343-1357. doi: 10.1007/s10482-013-9915-3 PMID: 23559042
28. Sonjak S, Uršic V, Frisvad JC, Gunde-Cimerman N. Penicillium svalbardense, a new species from Arctic glacial ice. Antonie van Leeuwenhoek 2007;92:43-51. PMID: 17252316
29. Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L. et al. Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi. Database, 2014. Available: http://dx.doi.org/10.1093/database/bau061.
30. Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA. et al. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for fungi. Proceedings of the National Academy of Sciences of the United States of America 2012;109:6241-6246. doi: 10.1073/pnas.1117018109 PMID: 22454494
31. Houbraken J, López-Quintero C, Frisvad JC, Boekhout T, Theelen B, Franco-Molano AE. Penicillium araracuarense sp nov., Penicillium elleniae sp. Nov., Penicillium penarojense sp. Nov., Penicillium vanderhammenii sp. Nov. and Penicillium wotroi sp. Nov., isolated from leaf litter. Int J Syst Evol Microbiol. 2011;61:1462-1475. doi: 10.1099/ijs.0.025098-0 PMID: 20639229