BioFire FilmArray respiratory panel for detection of enterovirus D68

Journal of Clinical Microbiology

Volumn 54, Issue 2, 2016, Pages 457-459

  Shibib, Dena R ^a,b   Matushek, Scott M ^a   Beavis, Kathleen G ^a   Gawel, Susan H ^c   Charnot Katsikas, Angella ^a  

^a UNIVERSITY OF CHICAGO MEDICAL CENTER   (United States)

^b NORTHSHORE UNIVERSITY HEALTHSYSTEM   (United States)

^c NORTHWESTERN UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; CHILD; CONTROLLED STUDY; ENTEROVIRUS; ENTEROVIRUS D; ENTEROVIRUS D68; HUMAN; MAJOR CLINICAL STUDY; MULTIPLEX POLYMERASE CHAIN REACTION; POLYMERASE CHAIN REACTION SYSTEM; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RHINOVIRUS; VIRUS DETECTION; ADOLESCENT; CLASSIFICATION; DIAGNOSTIC KIT; EPIDEMIC; GENETICS; PRESCHOOL CHILD; PROCEDURES; REPRODUCIBILITY; RESPIRATORY TRACT INFECTIONS; SENSITIVITY AND SPECIFICITY; STANDARDS; VIROLOGY; YOUNG ADULT;

DIAGNOSTIC KIT;

ADOLESCENT; ADULT; CHILD; CHILD, PRESCHOOL; DISEASE OUTBREAKS; ENTEROVIRUS D, HUMAN; HUMANS; MULTIPLEX POLYMERASE CHAIN REACTION; REAGENT KITS, DIAGNOSTIC; REPRODUCIBILITY OF RESULTS; RESPIRATORY TRACT INFECTIONS; RHINOVIRUS; SENSITIVITY AND SPECIFICITY; YOUNG ADULT;

EID: 84956686664     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02339-15     Document Type: Article

References (14)

1. Midgley CM, Jackson MA, Selvarangan R, Turabelidze G, Obringer E, Johnson D, Giles BL, Patel A, Echols F, Oberste MS, Nix WA, Watson JT, Gerber SI. 2014. Severe respiratory illness associated with enterovirus D68-Missouri and Illinois, 2014. MMWR Morb Mortal Wkly Rep 63: 798-799.
2. Imamura T, Oshitani H. 2015. Global reemergence of enterovirus D68 as an important pathogen for acute respiratory infections. Rev Med Virol 25:102-114. http://dx.doi.org/10.1002/rmv.1820.
3. Tokarz R, Firth C, Madhi SA, Howie SR, Wu W, Sall AA, Haq S, Briese T, Lipkin WI. 2012. Worldwide emergence of multiple clades of enterovirus 68. J Gen Virol 93:1952-1958. http://dx.doi.org/10.1099/vir.0.043935-0.
4. Stellrecht KA, Lamson DM, Romero JR. 2011. Enteroviruses and parechoviruses, p 1388-1389. In Versalovic J, Carroll KC, Funke G, Jorgensen JH, Landry ML, WarnockDW(ed), Manual of clinical microbiology, 10th ed, vol 2. ASM Press, Washington, DC.
5. Rohll JB, Percy N, Ley R, Evans DJ, Almond JW, Barclay WS. 1994. The 5=-untranslated regions of picornavirus RNAs contain independent functional domains essential for RNA replication and translation. J Virol 68: 4384-4391.
6. Buller RS, Arens MQ. 2011. Molecular detection of respiratory viruses, p 612-619. In Persing DH, Tenover FC, Tang YW, Nolte FS, Hayen RT, Van Belkum, A (ed), Molecular microbiology: diagnostic principles and practice, 2nd ed. ASM Press, Washington, DC.
7. BioFire Diagnostics. 2013. BioFire FilmArray respiratory panel package insert. BioFire Diagnostics, Salt Lake City, UT.
8. Poritz MA, Blaschke AJ, Byington CL, Meyers L, Nilsson K, Jones DE, Thatcher SA, Robbins T, Lingenfelter B, Amiott E, Herbener A, Daly J, Dobrowolski SF, Teng DHF, Ririe KM. 2011. FilmArray, an automated nested multiplex PCR system for multi-pathogen detection: development and application to respiratory tract infection. PLoS One 6:e26047. http://dx.doi.org/10.1371/journal.pone.0026047.
9. McAllister SC, Schleiss MR, Arbefeville S, Steiner ME, Hanson RS, Pollock C, Ferrieri P. 2015. Epidemic 2014 enterovirus D68 cross-reacts with human rhinovirus on a respiratory molecular diagnostic platform. PLoS One 10:e0118529. http://dx.doi.org/10.1371/journal.pone.0118529.
10. Clinical Micro Sensors, Inc. 2012. Genmark eSensor respiratory virus panel package insert. Clinical Micro Sensors, Inc., GenMark Diagnostics, Inc., Carlsbad, CA.
11. Nix WA, Oberste MS, Pallansch MA. 2006. Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens. J Clin Microbiol 44:2698-2704. http://dx.doi.org/10.1128/JCM.00542-06.
12. Kilpatrick DR, Yang CF, Ching K, Vincent A, Iber J, Campagnoli R, Mandelbaum M, De L, Yang SJ, Nix A, Kew OM. 2009. Rapid group-, serotype-, and vaccine strain-specific identification of poliovirus isolated by real-Time reverse transcription PCR using degenerate primers and probes containing deoxyinosine residues. J Clin Microbiol 47:1939-1941. http://dx.doi.org/10.1128/JCM.00702-09.
13. Oberste MS, Peñaranda S, Rogers SL, Henderson E, Nix WA. 2010. Comparative evaluation of Taqman real-Time PCR and semi-nested VP1 PCR for detection of enteroviruses in clinical specimens. J Clin Virol 49: 73-74. http://dx.doi.org/10.1016/j.jcv.2010.06.022.
14. Centers for Disease Control. 2014. Enterovirus D68 (EV-D68) 2014 outbreak strain-specific real-Time reverse transcription/polymerase chain reaction (rRT-PCR) assay instructions, version 10/14/2014. Centers for Disease Control and Prevention, Atlanta, GA.